#CPATH2: PC version 14 11 Mar 2024 #Columns: ID DESCRIPTION TYPE HOMEPAGE PATHWAYS INTERACTIONS PARTICIPANTS pc14:chebi ChEBI Ontology v231, 10-Mar-2024 WAREHOUSE https://www.ebi.ac.uk/chebi/ 0 0 0 pc14:uniprot_human UniProtKB/Swiss-Prot (human), release 2024_01 WAREHOUSE https://www.uniprot.org 0 0 0 pc14:unichem_mapping Selected whole-source id-mapping files (to ChEBI) from UniChem, 12-Nov-2023 MAPPING https://www.ebi.ac.uk/unichem/ 0 0 0 pc14:reactome Reactome v87 (only 'Homo_sapiens.owl') 04-Dec-2023 BIOPAX https://www.reactome.org 2673 23577 56583 pc14:pid NCI Curated Human Pathways from PID (final); 27-Jul-2015 BIOPAX https://en.wikipedia.org/wiki/NCI-Nature_Pathway_Interaction_Database 745 16017 10931 pc14:psp PhosphoSite Kinase-substrate information; 17-Nov-2023 BIOPAX https://www.phosphosite.org 0 38539 21019 pc14:humancyc HumanCyc 27.5; 2023; under license from SRI International, www.biocyc.org BIOPAX https://humancyc.org 358 7182 6177 pc14:hprd HPRD PSI-MI Release 9; 13-Apr-2010 PSI_MI http://www.hprd.org 0 39864 83555 pc14:panther PANTHER Pathways 3.6.7 on 01-Aug-2023 (auto-converted to human-only model) BIOPAX https://www.pantherdb.org 297 6000 8836 pc14:dip DIP (human - converted Hsapi20170205.mif25.gz to BioPAX), 05-Feb-2017 PSI_MI https://dip.doe-mbi.ucla.edu 0 9025 20477 pc14:biogrid BioGRID Release 4.4.227 (only BIOGRID-ORGANISM-Homo_sapiens-4.4.227.psi25.xml), 25-Oct-2023 PSI_MI https://thebiogrid.org/ 0 1184833 2369666 pc14:intact IntAct (human), except 'negative', 06-Oct-2023 PSI_MI https://www.ebi.ac.uk/intact/ 0 440170 1208042 pc14:intact_complex IntAct Complex (human), 06-Oct-2023 PSI_MI https://www.ebi.ac.uk/intact/ 0 0 10141 pc14:bind BIND (human), 15-Dec-2010 PSI_MI https://en.wikipedia.org/wiki/Biomolecular_Object_Network_Databank#Biomolecular_Interaction_Network_Database_(BIND) 0 35450 87242 pc14:corum CORUM 3.0 (human complexes), 03-Sep-2018 PSI_MI https://mips.helmholtz-muenchen.de/genre/proj/corum/ 0 0 10406 pc14:msigdb MSigDB v5.2 (XML), human C3 TFT motif gene sets, 09-2016; converted with http://github.com/PathwayCommons/msigdb-to-biopax BIOPAX http://software.broadinstitute.org/gsea/msigdb/ 0 252050 12307 pc14:mirtarbase Human miRNA-target gene relationships from MiRTarBase; v7.0, 15-SEP-2017, converted in Apr-2018 with http://github.com/PathwayCommons/mirtarbase-to-biopax BIOPAX http://mirtarbase.mbc.nctu.edu.tw/ 0 395703 17663 pc14:drugbank DrugBank v5.1.11, 03-Jan-2024, converted to BioPAX with our http://github.com/PathwayCommons/drugbank-to-biopax BIOPAX http://www.drugbank.ca/ 0 24367 26415 pc14:reconx Recon X: Reconstruction of the Human Genome; SBML model from BioModels, Recon 2 v2.02 (2013), converted to BioPAX by us using http://github.com/PathwayCommons/reconx-to-biopax library. BIOPAX http://humanmetabolism.org/ 0 10910 8908 pc14:ctd Curated chemical-gene interactions from Comparative Toxicogenomics Database, MDI Biological Laboratory, and NC State University; 28-Feb-2024; converted with http://github.com/PathwayCommons/ctd-to-biopax BIOPAX http://ctdbase.org/ 0 1045297 110177 pc14:kegg KEGG 07/2011 (only human, hsa* files), converted to BioPAX by BioModels (http://www.ebi.ac.uk/biomodels-main/) team BIOPAX https://www.genome.jp/kegg/ 122 3568 3536 pc14:inoh INOH 4.0 (signal transduction and metabolic data), 22-MAR-2011, archive BIOPAX http://inoh.hgc.jp 774 5625 22799 pc14:netpath NetPath 12/2011 BIOPAX http://www.netpath.org 27 7214 5337 pc14:pathbank Pathbank 2.0 BioPAX data (primary pathways, human data only), 16-Aug-2019 BIOPAX http://pathbank.org 1295 5291 6614 pc14:innatedb InnateDB Curated Interactions (human) 2017-06-18 (downloaded 2023-02-10) PSI_MITAB https://www.innatedb.ca 0 26173 59245 pc14:biofactoid Biofactoid BioPAX data, 2024-03-10 BIOPAX https://biofactoid.org 350 1593 1781