DrugBank
http://www.drugbank.ca/system/downloads/current/drugbank.xml.zip
Last-Modified: Mon, 23 Mar 2015 06:38:00 GMT
========
DrugBank_external_links
http://www.drugbank.ca/system/downloads/current/all_target_ids_all.csv.zip
Last-Modified: Mon, 23 Mar 2015 06:01:14 GMT
========
GO_Human
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/HUMAN//gene_association.goa_human.gz
Last-Modified: Mon, 02 Mar 2015 11:10:48 GMT
========
GO_OBO_FILE
ftp://ftp.geneontology.org/pub/go/ontology/obo_format_1_2//gene_ontology.1_2.obo
Last-Modified: Tue, 24 Mar 2015 08:32:17 GMT
========
Human_Phenotype
http://compbio.charite.de/hudson/job/hpo.annotations.monthly/lastStableBuild/artifact/annotation/ALL_SOURCES_ALL_FREQUENCIES_genes_to_phenotype.txt
Last-Modified: Thu, 26 Feb 2015 12:42:48 GMT
========
Human_phenotype_OBO_FILE
http://compbio.charite.de/svn/hpo/trunk/src/ontology//human-phenotype-ontology.obo
========
IOB
IOB pathways were recieved from IOB in July 2011, validated and autofixed using the biopax validator.
=====================
KEGG
Kegg was downloaded from the previously public ftp site on July 1, 2011
============NCI_Nature
ftp://ftp1.nci.nih.gov/pub/PID/BioPAX_Level_3/NCI-Nature_Curated.bp3.owl.gz
========
NetPath
http://www.netpath.org/data/biopax//NetPath_1.owl
Last-Modified: Wed, 14 Dec 2011 08:05:06 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_2.owl
Last-Modified: Thu, 14 Jul 2011 05:41:44 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_3.owl
Last-Modified: Wed, 14 Dec 2011 08:17:13 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_4.owl
Last-Modified: Wed, 14 Dec 2011 08:18:23 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_5.owl
Last-Modified: Wed, 14 Dec 2011 08:19:04 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_6.owl
Last-Modified: Wed, 14 Dec 2011 08:20:09 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_7.owl
Last-Modified: Wed, 14 Dec 2011 08:20:45 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_8.owl
Last-Modified: Wed, 14 Dec 2011 08:21:18 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_9.owl
Last-Modified: Wed, 14 Dec 2011 08:21:59 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_10.owl
Last-Modified: Wed, 14 Dec 2011 08:07:30 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_11.owl
Last-Modified: Wed, 14 Dec 2011 08:08:13 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_12.owl
Last-Modified: Wed, 14 Dec 2011 08:08:47 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_13.owl
Last-Modified: Wed, 14 Dec 2011 08:09:30 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_14.owl
Last-Modified: Wed, 14 Dec 2011 08:10:16 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_15.owl
Last-Modified: Wed, 14 Dec 2011 08:10:43 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_16.owl
Last-Modified: Wed, 14 Dec 2011 08:11:12 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_17.owl
Last-Modified: Wed, 14 Dec 2011 08:11:40 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_18.owl
Last-Modified: Wed, 14 Dec 2011 08:12:05 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_19.owl
Last-Modified: Wed, 14 Dec 2011 08:12:45 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_20.owl
Last-Modified: Wed, 14 Dec 2011 08:13:11 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_21.owl
Last-Modified: Wed, 14 Dec 2011 08:13:50 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_22.owl
Last-Modified: Wed, 14 Dec 2011 08:14:25 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_23.owl
Last-Modified: Wed, 14 Dec 2011 08:15:04 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_24.owl
Last-Modified: Wed, 28 Aug 2013 09:37:36 GMT
========
NetPath
http://www.netpath.org/data/biopax//NetPath_25.owl
Last-Modified: Wed, 14 Dec 2011 08:15:41 GMT
========
Panther
ftp://ftp.pantherdb.org//pathway/current_release//BioPAX.tar.gz
Last-Modified: Wed, 12 Nov 2014 18:26:04 GMT
========
Reactome
http://www.reactome.org/download/current//biopax.zip
Last-Modified: Mon, 23 Mar 2015 17:54:57 GMT
========
http://bioinformatics.ai.sri.com/ecocyc/dist/flatfiles-52983746//human.tar.gz
Last-Modified: Wed, 12 Nov 2014 20:25:32 GMT
MSigdb version 4.0
Msigdb -c3 - mirs
=============
MSigdb c2 version 4.0 - Biocarta 
Msigdb c2 version 3.0 - Other from c2 subset (no longer in 4.0 release)
==============
MSigdb version 4.0
msigdb c3 - transcription factors 
===============