DatasetSet_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls
#transDMproB_versus_transDMpreB_repos
Phenotypephenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in classtransDMproB
GeneSetJAK_STAT_CASCADE
Enrichment Score (ES)0.84544575
Normalized Enrichment Score (NES)1.5454675
Nominal p-value0.0054545454
FDR q-value0.3046344
FWER p-Value0.852
Table: GSEA Results Summary



Fig 1: Enrichment plot: JAK_STAT_CASCADE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1STAT414251 9907762.9690.2133Yes
2IL12A49131862.2030.3687Yes
3SOCS256942651.8600.5007Yes
4STAT13936 55244431.4770.5993Yes
5STAT35525 99065341.2630.6869Yes
6STAT5A2066411810.6010.6962Yes
7HCLS12277012090.5890.7379Yes
8SOCS32013112540.5670.7770Yes
9PIAS1712613350.5310.8115Yes
10STAMBP1709713940.5060.8454Yes
11STAT21984020870.2610.8273No
12F2R2138625420.1550.8143No
13F21452426850.1320.8163No
14IFNAR222705 169931760.0740.7953No
15HGS2056835860.0450.7766No
16IFNAR12270347800.0140.7135No
17IL201384054010.0090.6808No
18STAT5B2022259940.0060.6494No
19SOCS612042 704460670.0060.6460No
20NMI1459069840.0030.5969No
21CCR21925070580.0030.5932No
22CCL2978875890.0020.5648No
23LYN1628176070.0020.5640No
24CLCF112160 374210049-0.0040.4330No
25IL22RA22008210734-0.0060.3966No
26NF21222 516612322-0.0130.3122No
27FGFR38969 356612834-0.0160.2859No
28IL31RA2134713153-0.0190.2702No
29SOCS1452216716-0.3230.1022No
Table: GSEA details [plain text format]



Fig 2: JAK_STAT_CASCADE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: JAK_STAT_CASCADE: Random ES distribution   
Gene set null distribution of ES for JAK_STAT_CASCADE