Details for gene set V$TCF4

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls #transDMproB_versus_transDMpreB.phenotype_transDMproB_versus_transDMpreB.cls #transDMproB_versus_transDMpreB_repos
Phenotype	phenotype_transDMproB_versus_transDMpreB.cls#transDMproB_versus_transDMpreB_repos
Upregulated in class	transDMproB
GeneSet	V$TCF4_Q5
Enrichment Score (ES)	0.683379
Normalized Enrichment Score (NES)	1.6212351
Nominal p-value	0.0
FDR q-value	0.029076323
FWER p-Value	0.161

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARID1A	8214 2501 13554	6	5.419	0.1452	Yes
2	NEDD9	3206 21483	62	3.140	0.2265	Yes
3	PRKCB1	1693 9574	81	2.858	0.3023	Yes
4	SPO11	2666 14717	163	2.271	0.3589	Yes
5	TCF7L2	10048 5646	354	1.605	0.3917	Yes
6	HRBL	3452 16326 3614	398	1.545	0.4308	Yes
7	DLX1	14988	502	1.333	0.4610	Yes
8	PSCD3	16633	552	1.237	0.4916	Yes
9	CHD2	10847	573	1.217	0.5232	Yes
10	NFIX	9458	582	1.194	0.5548	Yes
11	ENPP5	23230	618	1.120	0.5830	Yes
12	HOXB4	20686	767	0.952	0.6005	Yes
13	TNFRSF19	21799 3033	875	0.850	0.6175	Yes
14	UCP2	5829 3059	958	0.768	0.6337	Yes
15	CENTG2	6874	1056	0.680	0.6467	Yes
16	SNX17	3495 16885	1115	0.643	0.6608	Yes
17	PPARGC1A	16533	1193	0.597	0.6727	Yes
18	PLSCR1	10218	1736	0.367	0.6532	Yes
19	ABCD1	24305	1762	0.359	0.6614	Yes
20	PHC1	17013	1787	0.351	0.6696	Yes
21	PANK2	14838	1904	0.313	0.6717	Yes
22	FEM1C	23441 10771 23442	1993	0.287	0.6746	Yes
23	PIM1	23308	2016	0.280	0.6809	Yes
24	STX1A	16679	2099	0.257	0.6834	Yes
25	SCAMP3	15543	2430	0.175	0.6702	No
26	EFNA4	1866 15277	3066	0.084	0.6381	No
27	ABHD2	18208 12043	3118	0.080	0.6374	No
28	SGCD	1425 10779	3269	0.066	0.6311	No
29	MAP4K5	11853 21048 2101 2142	3298	0.063	0.6313	No
30	CHN2	7652	3342	0.060	0.6305	No
31	SLC26A9	11560 980 4067	3510	0.049	0.6228	No
32	WNT3	20635	3590	0.045	0.6197	No
33	NCDN	15756 2487 6471	3623	0.043	0.6191	No
34	SOX5	9850 1044 5480 16937	3677	0.041	0.6174	No
35	HOXB6	20688	3942	0.031	0.6039	No
36	EYA1	4695 4061	3955	0.030	0.6040	No
37	GAB2	1821 18184 2025	3992	0.029	0.6029	No
38	SMO	11474 6702	4001	0.029	0.6032	No
39	SLC7A8	3611 21833	4091	0.026	0.5991	No
40	ZIC4	5992	4303	0.021	0.5882	No
41	ABCD2	11204 6494	4312	0.021	0.5883	No
42	CPNE1	11186	4352	0.020	0.5868	No
43	LIN28	15723	4361	0.020	0.5869	No
44	TRIM33	8236 13579 15472 8237	4377	0.019	0.5866	No
45	TRPM1	10846 474 9395 494	4463	0.018	0.5824	No
46	TGM1	21821	4522	0.017	0.5798	No
47	SLC17A6	18226	4561	0.016	0.5781	No
48	MESP1	17786	4621	0.016	0.5754	No
49	CNTF	3741 8761 3680 3736	4979	0.012	0.5563	No
50	TLL2	23680	4988	0.012	0.5562	No
51	HOXD12	9113	5152	0.011	0.5477	No
52	EYA2	2734 14729	5330	0.010	0.5383	No
53	HOXA11	17146	5351	0.009	0.5375	No
54	MITF	17349	5365	0.009	0.5370	No
55	PAM	5222	5454	0.009	0.5325	No
56	DCT	4603 21723	5738	0.007	0.5174	No
57	VIT	23155	5867	0.007	0.5106	No
58	NEUROD4	19582	6089	0.006	0.4988	No
59	MYL3	19291	6142	0.006	0.4961	No
60	ELK3	4663 94 3388	6506	0.004	0.4766	No
61	NKX2-8	9465	6597	0.004	0.4718	No
62	LHX4	13800	6653	0.004	0.4690	No
63	NEXN	12737 1903	6809	0.004	0.4607	No
64	FOXA1	21060	6822	0.004	0.4601	No
65	SYTL2	18190 1539 3730	6956	0.003	0.4530	No
66	BMP7	14324	7178	0.003	0.4411	No
67	PCDH7	7029 3460	7522	0.002	0.4225	No
68	DKK1	23700	7558	0.002	0.4207	No
69	HOXA2	17151	7568	0.002	0.4202	No
70	ADAMTS19	23544	7916	0.001	0.4014	No
71	SH3RF2	23571	8050	0.000	0.3943	No
72	SDPR	14252	8283	-0.000	0.3817	No
73	SLC17A2	10163 5744	8633	-0.001	0.3628	No
74	ITGB6	14581 2809	8642	-0.001	0.3624	No
75	CDX1	23429	8749	-0.001	0.3567	No
76	HAPLN1	21592	8770	-0.001	0.3556	No
77	MYH4	20837	8803	-0.001	0.3539	No
78	SLC22A8	23944	8986	-0.002	0.3441	No
79	EIF4A2	4660 1679 1645	9078	-0.002	0.3393	No
80	CTHRC1	22485	9155	-0.002	0.3352	No
81	EDN3	14714	9160	-0.002	0.3350	No
82	ACIN1	3319 2807 21832	9219	-0.002	0.3320	No
83	PRRX1	9595 5271	9243	-0.002	0.3308	No
84	NHLH2	9462	9248	-0.002	0.3306	No
85	LRRTM3	19744	9277	-0.003	0.3292	No
86	MME	15579	9421	-0.003	0.3215	No
87	FST	8985	9508	-0.003	0.3169	No
88	SULT2A1	5527	9515	-0.003	0.3167	No
89	EBF2	21975	9602	-0.003	0.3121	No
90	HOXD3	9115	9774	-0.004	0.3029	No
91	LIFR	22515 9277	9808	-0.004	0.3013	No
92	DQX1	17399	9988	-0.004	0.2917	No
93	HOXC6	22339 2302	10191	-0.005	0.2809	No
94	HOXA10	17145 989	10319	-0.005	0.2741	No
95	NFATC4	22002	10475	-0.006	0.2659	No
96	ZIC1	19040	10535	-0.006	0.2628	No
97	PUNC	19406	10574	-0.006	0.2609	No
98	VAX1	23636	10658	-0.006	0.2566	No
99	EIF4E	15403 1827 8890	10775	-0.006	0.2505	No
100	GPC4	24153	10937	-0.007	0.2419	No
101	CYP2E1	18025	11019	-0.007	0.2377	No
102	AKAP1	4364 1326 1286 20299	11102	-0.007	0.2335	No
103	SYNPR	22094	11108	-0.007	0.2334	No
104	DACH1	4595 3371	11316	-0.008	0.2224	No
105	WNT6	5881	11346	-0.008	0.2211	No
106	SIX4	5445	11383	-0.008	0.2193	No
107	UBE3A	1209 1084 1830	11497	-0.009	0.2135	No
108	TCERG1L	7690	11597	-0.009	0.2084	No
109	CUBN	14682	11697	-0.010	0.2032	No
110	CGN	12896 12897 7701	11944	-0.011	0.1902	No
111	T	23388	12044	-0.011	0.1851	No
112	SOX6	3684 5481 9851	12076	-0.012	0.1838	No
113	PCM1	3780 5229	12133	-0.012	0.1811	No
114	PAX3	13910	12302	-0.013	0.1723	No
115	DOCK3	9920 5537 10751	12401	-0.013	0.1673	No
116	NR4A3	9473 16212 5183	12466	-0.014	0.1642	No
117	NKD1	8228	12481	-0.014	0.1639	No
118	YARS	16071	12527	-0.014	0.1618	No
119	PCDH8	21739 3017	12657	-0.015	0.1552	No
120	MMP21	17589	12690	-0.015	0.1539	No
121	HABP2	10364 23825	12706	-0.015	0.1535	No
122	OGG1	17331	12951	-0.017	0.1407	No
123	GABRB2	20922	13017	-0.018	0.1377	No
124	FGF10	4719 8962	13261	-0.020	0.1250	No
125	G6PC	20656	13495	-0.022	0.1130	No
126	COL18A1	19719 3360	13546	-0.023	0.1109	No
127	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	13585	-0.024	0.1095	No
128	SMAD1	18831 922	13589	-0.024	0.1100	No
129	PCBP4	12235	13808	-0.027	0.0989	No
130	NRP2	5194 9486 5195	13821	-0.027	0.0990	No
131	PANK1	1687 23692	13833	-0.028	0.0991	No
132	SPOCK2	13585	13915	-0.029	0.0955	No
133	ELF5	14936 2913	13928	-0.029	0.0957	No
134	AP1G2	2677 21827	14069	-0.032	0.0889	No
135	HAS2	22293	14328	-0.037	0.0759	No
136	SCG3	19061	14367	-0.038	0.0749	No
137	FOXP2	4312 17523 8523	14370	-0.039	0.0758	No
138	NPPA	298	14382	-0.039	0.0763	No
139	PROX1	9623	14412	-0.040	0.0758	No
140	SP8	21122	14452	-0.041	0.0748	No
141	HNRPR	13196 7909 2500	14697	-0.048	0.0628	No
142	FGF17	21757	14703	-0.048	0.0639	No
143	PRDM13	15933	14786	-0.051	0.0608	No
144	GPX2	9037	14800	-0.051	0.0614	No
145	FERD3L	21292	14904	-0.056	0.0574	No
146	TCF7	1467 20466	14977	-0.060	0.0551	No
147	MAP2K6	20614 1414	15246	-0.076	0.0426	No
148	PPP2R5C	6522 2147	15296	-0.079	0.0420	No
149	EBAG9	2237 12065	15341	-0.082	0.0418	No
150	HOXB7	666 9110	15704	-0.116	0.0254	No
151	RERE	12722	15801	-0.128	0.0236	No
152	CHRNA9	16836	15855	-0.136	0.0244	No
153	ZHX2	11842	16078	-0.171	0.0169	No
154	PRDM2	2522 4289	16081	-0.171	0.0214	No
155	EML4	8122	16304	-0.218	0.0153	No
156	RPL23A	11193	16315	-0.221	0.0207	No
157	CORO1C	16425	16397	-0.242	0.0228	No
158	NLK	5179 5178	16855	-0.362	0.0077	No
159	ADAM9	18910	16943	-0.389	0.0135	No
160	CDC42BPB	20982	17109	-0.448	0.0165	No
161	SLC25A28	23669	17576	-0.674	0.0094	No
162	EIF2B4	16574	17823	-0.831	0.0184	No
163	PRKRIR	7834	17930	-0.914	0.0372	No