Details for gene set V$SP1_Q6

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$SP1_Q6_01
Enrichment Score (ES)	-0.6146496
Normalized Enrichment Score (NES)	-1.5352594
Nominal p-value	0.0
FDR q-value	0.5327344
FWER p-Value	0.804

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDK5R1	20745	411	0.466	-0.0024	No
2	RELB	17942	412	0.466	0.0174	No
3	UGP2	20518	714	0.339	0.0156	No
4	OAZ2	9499	848	0.305	0.0214	No
5	SLC2A1	16107	870	0.301	0.0331	No
6	CHKA	23759	1115	0.256	0.0308	No
7	POLR2I	12839	1179	0.244	0.0378	No
8	PGF	21020	1354	0.217	0.0376	No
9	STMN1	9261	1374	0.216	0.0458	No
10	DDB1	23931	1462	0.202	0.0496	No
11	PHCA	12301 7263	1671	0.172	0.0457	No
12	RHOG	17727	1773	0.160	0.0471	No
13	CLPTM1	17940	1779	0.160	0.0536	No
14	PARD6A	12142	1887	0.146	0.0540	No
15	PSMC6	7379	2078	0.124	0.0490	No
16	TMEM24	19150	2185	0.115	0.0482	No
17	CORO1C	16425	2273	0.106	0.0479	No
18	RAB35	13386	2278	0.105	0.0522	No
19	LASP1	4986 4985 1248	2468	0.090	0.0458	No
20	TEAD2	18252	2518	0.087	0.0469	No
21	ADAM17	4343	2563	0.084	0.0481	No
22	MYO1C	20777	2631	0.080	0.0478	No
23	SEC24C	22086	2699	0.075	0.0474	No
24	PIAS1	7126	2714	0.074	0.0498	No
25	AP1GBP1	20725	2759	0.072	0.0505	No
26	EPS15	4677	2801	0.069	0.0512	No
27	KLF5	4456	2897	0.063	0.0487	No
28	FKBP8	18587	2914	0.063	0.0506	No
29	BCL7C	4442	3070	0.055	0.0445	No
30	GABARAPL2	8211 13552	3243	0.048	0.0372	No
31	ACE	1419 4313	3300	0.046	0.0361	No
32	SNAPAP	15270	3441	0.041	0.0303	No
33	IQGAP1	6619	3500	0.039	0.0288	No
34	RELA	23783	3534	0.038	0.0287	No
35	VASP	5847	3549	0.038	0.0295	No
36	SLC35F5	13171	3592	0.037	0.0288	No
37	MAZ	1327 17623	3641	0.035	0.0277	No
38	PLEKHM1	20196 1449	3680	0.034	0.0271	No
39	KLF2	9229	3686	0.034	0.0283	No
40	NFYB	5173	3713	0.034	0.0283	No
41	ROM1	23751	3766	0.033	0.0269	No
42	GLTP	16419	3872	0.030	0.0225	No
43	XPR1	5383	3876	0.030	0.0236	No
44	SMOC1	21221	3883	0.030	0.0246	No
45	SLC18A3	21883	4020	0.027	0.0184	No
46	ADCK1	21191	4322	0.022	0.0030	No
47	DUOX1	14879	4324	0.022	0.0039	No
48	SMARCD1	2241 22360 2250	4522	0.020	-0.0060	No
49	WNT2B	15214 1838	4713	0.018	-0.0155	No
50	TAGLN	19136	4842	0.016	-0.0218	No
51	RAB26	11609	4918	0.016	-0.0251	No
52	BRI3BP	16696	4998	0.015	-0.0288	No
53	SUV39H2	7232 12263	5083	0.015	-0.0327	No
54	RAB2B	21842	5122	0.014	-0.0342	No
55	PIAS3	15491 672 1906	5601	0.011	-0.0596	No
56	TLX2	5773 1165	5750	0.011	-0.0671	No
57	OTX1	20517	5923	0.010	-0.0760	No
58	MAPK7	1381 20414	5971	0.010	-0.0782	No
59	PVRL2	9671 5336	6192	0.009	-0.0897	No
60	JUB	21834 3339	6363	0.008	-0.0986	No
61	EDG8	19212	6687	0.007	-0.1158	No
62	APLP1	17890	6994	0.006	-0.1321	No
63	SLC30A3	5995	7024	0.006	-0.1334	No
64	FDX1	19117	7031	0.006	-0.1335	No
65	ELAVL3	9136	8118	0.003	-0.1922	No
66	BCL2L2	8653 4441	8391	0.003	-0.2069	No
67	TIMELESS	10177	8688	0.002	-0.2228	No
68	ELAC2	1267 20843	9190	0.001	-0.2499	No
69	BCL9L	19475	9246	0.001	-0.2528	No
70	IRX3	18793	9560	0.000	-0.2698	No
71	PGM2L1	7712	9613	0.000	-0.2726	No
72	CRY1	19662	9653	0.000	-0.2747	No
73	KCNQ4	12247 2533	9819	-0.000	-0.2836	No
74	ASCL2	5079	10044	-0.001	-0.2957	No
75	KTN1	2865 22034 2586	10091	-0.001	-0.2982	No
76	ACBD5	15105 2751	10329	-0.001	-0.3110	No
77	NXPH4	19602	10645	-0.002	-0.3280	No
78	PIP5K2B	20269 1254	10847	-0.002	-0.3388	No
79	SLC24A6	16721	10970	-0.002	-0.3453	No
80	CACNA1A	4461	10987	-0.002	-0.3461	No
81	HTATIP	3690	11227	-0.003	-0.3589	No
82	NOTCH3	23031	11303	-0.003	-0.3629	No
83	CSPG4	19435 15262	11318	-0.003	-0.3635	No
84	CHAT	21882	11371	-0.003	-0.3662	No
85	MAP2K7	6453	11434	-0.003	-0.3694	No
86	LOXL4	23672	11590	-0.004	-0.3777	No
87	PIGW	20312	11741	-0.004	-0.3856	No
88	SFRS2	9807 20136	12005	-0.004	-0.3997	No
89	PTPN2	23414	12037	-0.004	-0.4012	No
90	CBLN1	18800	12174	-0.005	-0.4083	No
91	CNNM4	14273	12181	-0.005	-0.4085	No
92	A2BP1	11212 1652 1689	12186	-0.005	-0.4085	No
93	FOSB	17945	12838	-0.007	-0.4435	No
94	ABCC1	1668 5087	13107	-0.007	-0.4577	No
95	HCN4	9080	13157	-0.008	-0.4600	No
96	HOXC13	22344	13190	-0.008	-0.4614	No
97	FGF11	20383	13286	-0.008	-0.4662	No
98	PIGN	13865	13290	-0.008	-0.4660	No
99	HES7	20828	13355	-0.008	-0.4691	No
100	EFNB3	20391	13361	-0.008	-0.4691	No
101	IDH3A	19447	13566	-0.009	-0.4797	No
102	PTCH2	9640	13706	-0.010	-0.4868	No
103	GGN	2472 1171 18312	14042	-0.011	-0.5045	No
104	SLC1A2	5453	14145	-0.012	-0.5095	No
105	CAMK2G	21905	14433	-0.014	-0.5245	No
106	ANKRD25	6161	14553	-0.015	-0.5303	No
107	HTR7	23690	14623	-0.015	-0.5334	No
108	GPR3	15729	14741	-0.016	-0.5390	No
109	PHOX2A	18168	14759	-0.016	-0.5392	No
110	CYP26B1	17093	15018	-0.020	-0.5524	No
111	NTF5	18248	15099	-0.021	-0.5558	No
112	ECE1	2427 10516	15204	-0.022	-0.5605	No
113	CXCL12	9792 1182 1031	15675	-0.033	-0.5846	No
114	MAP3K6	16054	15681	-0.033	-0.5834	No
115	ADAM15	15275	15688	-0.033	-0.5823	No
116	TCF4	5642	15778	-0.037	-0.5856	No
117	EFNA3	15278	15955	-0.044	-0.5933	No
118	CDC37	19214	15994	-0.045	-0.5934	No
119	GRB2	20149	16030	-0.047	-0.5933	No
120	EPS8L2	18012	16036	-0.047	-0.5915	No
121	NAV1	3978 5681	16192	-0.055	-0.5976	No
122	SPATA6	16134	16304	-0.062	-0.6010	No
123	CPD	20344 4556	16454	-0.072	-0.6060	No
124	DNAJC4	23796	16615	-0.085	-0.6110	Yes
125	NET1	7100	16631	-0.087	-0.6081	Yes
126	CALM3	8682	16715	-0.094	-0.6086	Yes
127	SHMT1	5431	16719	-0.095	-0.6047	Yes
128	MYOHD1	20724	16784	-0.101	-0.6039	Yes
129	POLR3E	18100	16874	-0.110	-0.6040	Yes
130	CSNK1D	4181 8352 1387	16987	-0.124	-0.6048	Yes
131	DRAP1	23979	17030	-0.129	-0.6016	Yes
132	ELL	18586	17049	-0.131	-0.5970	Yes
133	PER1	20827	17062	-0.134	-0.5919	Yes
134	GCN5L2	4763	17086	-0.137	-0.5873	Yes
135	TGFB1	18332	17111	-0.141	-0.5826	Yes
136	PTOV1	13522	17137	-0.144	-0.5778	Yes
137	MAP3K11	11163	17143	-0.146	-0.5719	Yes
138	PEX14	15668	17145	-0.146	-0.5657	Yes
139	ULK1	16436	17149	-0.146	-0.5597	Yes
140	SIPA1	9820	17238	-0.160	-0.5576	Yes
141	SENP1	10301	17291	-0.167	-0.5533	Yes
142	TRIM28	18389	17315	-0.172	-0.5472	Yes
143	PITPNM1	23770	17519	-0.210	-0.5493	Yes
144	TAGLN2	14043	17746	-0.256	-0.5506	Yes
145	SCYL1	23986	17819	-0.277	-0.5427	Yes
146	PAK4	17909	17866	-0.291	-0.5328	Yes
147	SMARCE1	1218 20253	17880	-0.298	-0.5208	Yes
148	LDB1	23654	17896	-0.304	-0.5087	Yes
149	RABEP2	18082	18032	-0.351	-0.5010	Yes
150	UPF2	11591	18058	-0.365	-0.4868	Yes
151	LZTS2	10362	18110	-0.385	-0.4731	Yes
152	GOLGA3	6535	18114	-0.388	-0.4568	Yes
153	VAMP2	20826	18175	-0.423	-0.4420	Yes
154	MAP4K2	6457	18228	-0.460	-0.4252	Yes
155	APLP2	19190	18258	-0.480	-0.4063	Yes
156	ATP2A2	4421 3481	18345	-0.567	-0.3868	Yes
157	NLK	5179 5178	18353	-0.578	-0.3625	Yes
158	INPPL1	17733 3775	18372	-0.598	-0.3380	Yes
159	DGKA	3359 19589	18482	-0.843	-0.3080	Yes
160	ANP32A	8592 4387 19415	18574	-1.725	-0.2394	Yes
161	NFAT5	3921 7037 12036	18604	-2.808	-0.1213	Yes
162	GAS7	20836 1299	18606	-2.859	0.0005	Yes