Details for gene set V$HNF4_DR1

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$HNF4_DR1_Q3
Enrichment Score (ES)	-0.56655896
Normalized Enrichment Score (NES)	-1.4130038
Nominal p-value	0.005524862
FDR q-value	0.526531
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LAMP2	9267 2653	162	0.982	0.0318	No
2	PICALM	18191	284	0.591	0.0496	No
3	SGK	9809 3419	321	0.544	0.0702	No
4	LMAN2	21454	712	0.340	0.0630	No
5	POLR2H	10888	865	0.302	0.0673	No
6	POLD4	12822	950	0.288	0.0746	No
7	GPRC5B	17662	979	0.282	0.0847	No
8	TCN2	20550	1035	0.271	0.0930	No
9	SELM	20967	1053	0.268	0.1031	No
10	GTF2I	16353 5491 9863 3280 3184	1057	0.267	0.1140	No
11	HSPE1	9133	1100	0.259	0.1224	No
12	RAB5C	20226	1200	0.240	0.1269	No
13	GALK1	20147	1260	0.230	0.1332	No
14	PGF	21020	1354	0.217	0.1371	No
15	ESRRA	23802	1519	0.193	0.1362	No
16	AGPS	14979	1619	0.178	0.1382	No
17	SOD1	9846	2048	0.128	0.1202	No
18	DMD	24295 2647	2070	0.125	0.1242	No
19	TMEM24	19150	2185	0.115	0.1228	No
20	MRPL11	23774	2464	0.090	0.1114	No
21	TOMM70A	6608	2466	0.090	0.1151	No
22	ZDHHC3	7598 12763	2532	0.087	0.1152	No
23	EEF1B2	4131 12063	2617	0.081	0.1140	No
24	SCAMP3	15543	2662	0.077	0.1148	No
25	F10	18682	2931	0.062	0.1028	No
26	KLK6	9231 9626	3057	0.055	0.0983	No
27	PRRX2	15047	3222	0.049	0.0914	No
28	DAB2IP	12808 2692	3276	0.047	0.0905	No
29	HIP2	3626 3485 16838	3338	0.044	0.0890	No
30	BIN3	21969	3402	0.042	0.0873	No
31	CLDN10	21935 2785 2601 2720 7188	3560	0.038	0.0804	No
32	SOX5	9850 1044 5480 16937	3612	0.036	0.0791	No
33	SMOC1	21221	3883	0.030	0.0657	No
34	WNT3	20635	4150	0.025	0.0523	No
35	NR4A3	9473 16212 5183	4183	0.024	0.0515	No
36	F12	3260 21453	4808	0.017	0.0184	No
37	FXYD1	17874 85	4888	0.016	0.0147	No
38	NR1H3	10258 2787	5284	0.013	-0.0061	No
39	TLE1	5765 10185 15859	5397	0.013	-0.0117	No
40	UBE2R2	16240	5486	0.012	-0.0160	No
41	POU5F1	1547 23255	5531	0.012	-0.0179	No
42	JMJD1C	11531 19996	5574	0.012	-0.0197	No
43	TOM1L2	10115	5577	0.012	-0.0193	No
44	OVOL1	23983	5620	0.011	-0.0211	No
45	LMOD3	17059	5772	0.011	-0.0289	No
46	GPR124	18643 918	5877	0.010	-0.0341	No
47	CSF2	20454	5902	0.010	-0.0350	No
48	PRODH2	1854 18300	5903	0.010	-0.0346	No
49	PPARGC1A	16533	6148	0.009	-0.0474	No
50	HOXB6	20688	6175	0.009	-0.0485	No
51	LRRN1	17343	6285	0.008	-0.0540	No
52	FOXA1	21060	6372	0.008	-0.0584	No
53	NEUROG2	15426	6392	0.008	-0.0591	No
54	GUCY2C	1140 16954	6427	0.008	-0.0606	No
55	SEMA3B	5422	6580	0.007	-0.0685	No
56	SNAI1	14726	6823	0.007	-0.0814	No
57	USP12	5825 5824	6824	0.007	-0.0811	No
58	FGFR3	8969 3566	7001	0.006	-0.0904	No
59	CNTFR	2515 15906	7043	0.006	-0.0924	No
60	PPP1R14D	14471	7091	0.006	-0.0947	No
61	USH1C	1471 17821	7093	0.006	-0.0945	No
62	PDLIM7	7434	7185	0.006	-0.0992	No
63	PEX16	2681	7196	0.006	-0.0995	No
64	PFKFB1	9552	7348	0.005	-0.1075	No
65	PAK1IP1	21660	7570	0.005	-0.1193	No
66	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	7640	0.004	-0.1229	No
67	PDZK1	15490	7694	0.004	-0.1256	No
68	MSX1	16547	7716	0.004	-0.1266	No
69	GDNF	22514 2275	7813	0.004	-0.1316	No
70	ERBB3	19593	7885	0.004	-0.1353	No
71	PAPLN	9301	7915	0.004	-0.1367	No
72	HOXA3	9108 1075	7917	0.004	-0.1366	No
73	TTR	23615	8026	0.003	-0.1423	No
74	LCAT	18762	8410	0.003	-0.1630	No
75	TREH	19474	8414	0.003	-0.1631	No
76	PIPOX	20340	8618	0.002	-0.1740	No
77	FOXA3	17949	8664	0.002	-0.1763	No
78	TIMELESS	10177	8688	0.002	-0.1775	No
79	IRX6	7225	8740	0.002	-0.1802	No
80	PRDM16	12893	8812	0.002	-0.1840	No
81	GOLGA4	12022	9134	0.001	-0.2013	No
82	ERBB2	8913	9244	0.001	-0.2072	No
83	DNAJA2	12133 18806	9629	0.000	-0.2280	No
84	TNFRSF12A	23107	9919	-0.000	-0.2437	No
85	PAX7	15697	10052	-0.001	-0.2508	No
86	ADAMTS19	23544	10133	-0.001	-0.2551	No
87	STMN2	15638	10262	-0.001	-0.2620	No
88	HOXD3	9115	10345	-0.001	-0.2664	No
89	KCNE1L	24044	10504	-0.001	-0.2749	No
90	CKAP4	19663	10629	-0.002	-0.2816	No
91	NDUFS1	13940	10638	-0.002	-0.2819	No
92	SLC34A1	9824	10653	-0.002	-0.2826	No
93	NR2C1	10215	10666	-0.002	-0.2832	No
94	MPL	15780	10900	-0.002	-0.2958	No
95	IBRDC2	5747	10914	-0.002	-0.2964	No
96	MOBP	5112	10986	-0.002	-0.3001	No
97	MLLT6	20678	11145	-0.003	-0.3086	No
98	PRDM1	19775 3337	11162	-0.003	-0.3094	No
99	CLCNKA	15690	11299	-0.003	-0.3166	No
100	CDX1	23429	11368	-0.003	-0.3202	No
101	FABP1	17420	11822	-0.004	-0.3446	No
102	SCN1A	9784	11860	-0.004	-0.3464	No
103	EFEMP1	20937	11969	-0.004	-0.3521	No
104	SNAP25	5466	12140	-0.005	-0.3611	No
105	DUSP3	1358 13022	12288	-0.005	-0.3689	No
106	ARHGEF7	3823	12410	-0.005	-0.3752	No
107	ARHGEF12	19156	12482	-0.006	-0.3788	No
108	CRABP2	15554	12493	-0.006	-0.3792	No
109	TREX1	10219 3111	12666	-0.006	-0.3882	No
110	OTC	9518	12694	-0.006	-0.3894	No
111	LRP1	9284	12835	-0.007	-0.3968	No
112	EFNB3	20391	13361	-0.008	-0.4249	No
113	RQCD1	12205	13504	-0.009	-0.4322	No
114	PTPRG	22097 3151	13509	-0.009	-0.4321	No
115	PKLR	1850 15545	13797	-0.010	-0.4472	No
116	FBLN1	4716 2208	13816	-0.010	-0.4478	No
117	EGR3	4656	13887	-0.011	-0.4511	No
118	PURA	9670	14263	-0.013	-0.4709	No
119	PELO	8360	14514	-0.014	-0.4839	No
120	SLC39A5	3364 19596	14657	-0.016	-0.4909	No
121	GRK5	9036 23814	14816	-0.017	-0.4988	No
122	YBX2	20818	14912	-0.018	-0.5032	No
123	SPRY4	23448	14922	-0.018	-0.5029	No
124	PTHR1	5318 18985	14995	-0.019	-0.5060	No
125	DPF3	7659 12853	15176	-0.022	-0.5149	No
126	ZIC4	5992	15237	-0.023	-0.5172	No
127	SLC26A6	19304	15453	-0.027	-0.5277	No
128	TLK2	20628	15496	-0.028	-0.5289	No
129	MTMR4	20712	15520	-0.029	-0.5289	No
130	LGI4	18296	15577	-0.030	-0.5307	No
131	INSR	18950	15741	-0.035	-0.5381	No
132	MASP2	2547	15762	-0.036	-0.5377	No
133	SFRS6	14751	15999	-0.046	-0.5486	No
134	TTYH2	8585 4382 20605	16017	-0.046	-0.5476	No
135	SLC23A3	10367	16057	-0.048	-0.5477	No
136	SMYD5	17386	16144	-0.053	-0.5502	No
137	GATA4	21792 4755	16154	-0.053	-0.5485	No
138	HAGH	9020	16163	-0.054	-0.5467	No
139	CLCN2	22637	16235	-0.058	-0.5482	No
140	USP37	13923	16267	-0.059	-0.5474	No
141	NR2F6	4651 8876 18848 8912	16528	-0.077	-0.5583	No
142	HSD17B8	9061	16547	-0.079	-0.5560	No
143	NET1	7100	16631	-0.087	-0.5569	No
144	SHMT1	5431	16719	-0.095	-0.5577	No
145	NPHP4	15978	16748	-0.098	-0.5552	No
146	RBMS1	14580	16958	-0.120	-0.5616	Yes
147	MARK2	8899	17003	-0.126	-0.5588	Yes
148	AHCYL1	6037	17099	-0.139	-0.5582	Yes
149	MAP3K11	11163	17143	-0.146	-0.5545	Yes
150	DNAJB12	7146	17170	-0.149	-0.5498	Yes
151	MYH10	8077	17236	-0.160	-0.5467	Yes
152	PSMF1	6009	17379	-0.183	-0.5469	Yes
153	MAGMAS	1677 22678	17411	-0.189	-0.5407	Yes
154	GTF3C2	7749	17468	-0.199	-0.5355	Yes
155	PRKCD	21897	17470	-0.200	-0.5274	Yes
156	PABPN1	12018	17501	-0.206	-0.5205	Yes
157	EIF4EBP2	4662	17561	-0.218	-0.5147	Yes
158	ENO3	8905	17566	-0.219	-0.5058	Yes
159	HOXA5	17149	17569	-0.220	-0.4968	Yes
160	ATP1B1	4420	17583	-0.223	-0.4883	Yes
161	NDST2	21906	17596	-0.225	-0.4797	Yes
162	SENP2	7990	17626	-0.231	-0.4717	Yes
163	EXOSC7	19256	17713	-0.250	-0.4661	Yes
164	USP52	3397 19841	17721	-0.251	-0.4561	Yes
165	HIBADH	17144	17732	-0.253	-0.4462	Yes
166	PAK4	17909	17866	-0.291	-0.4414	Yes
167	AP1B1	8599	17970	-0.329	-0.4334	Yes
168	PFN1	9555	18097	-0.381	-0.4245	Yes
169	PCTK1	24369	18135	-0.399	-0.4100	Yes
170	PRKCSH	19535	18146	-0.404	-0.3939	Yes
171	GBL	23091 1612	18188	-0.433	-0.3782	Yes
172	FKBP5	23051	18239	-0.466	-0.3616	Yes
173	HSPD1	4078 9129	18315	-0.533	-0.3437	Yes
174	SS18	6506 6505 2030	18356	-0.579	-0.3219	Yes
175	ZBTB12	23268	18395	-0.637	-0.2977	Yes
176	DCTN1	1100 17392	18464	-0.790	-0.2687	Yes
177	TP53	20822	18610	-3.019	-0.1519	Yes
178	DCTN2	7635 12812	18612	-3.684	0.0002	Yes