Details for gene set V$FREAC4

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	transDMproB
GeneSet	V$FREAC4_01
Enrichment Score (ES)	0.66024876
Normalized Enrichment Score (NES)	1.4219939
Nominal p-value	0.021594685
FDR q-value	0.5894007
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PUM2	2071 8161	41	2.138	0.2054	Yes
2	UBE2H	5823 5822	82	1.552	0.3539	Yes
3	SLC31A1	2447 16195	197	0.789	0.4244	Yes
4	ZFX	5984	232	0.694	0.4899	Yes
5	CDKN1A	4511 8729	243	0.664	0.5539	Yes
6	GFRA1	9015	529	0.399	0.5773	Yes
7	MBNL2	21932	626	0.363	0.6073	Yes
8	KBTBD2	17137	1327	0.221	0.5910	Yes
9	PLS3	8332	1430	0.207	0.6056	Yes
10	TAF5L	18712	1478	0.200	0.6225	Yes
11	TCF7L2	10048 5646	1520	0.193	0.6390	Yes
12	TRPS1	8195	1563	0.187	0.6549	Yes
13	ETHE1	18347	1862	0.150	0.6534	Yes
14	TMOD3	6945	2139	0.118	0.6499	Yes
15	EMP1	17260	2159	0.117	0.6602	Yes
16	HSPG2	4884 16023	3142	0.052	0.6122	No
17	LMO4	15151	3331	0.045	0.6064	No
18	PER2	3940 13881	4412	0.021	0.5501	No
19	CAMK1D	5977 2948	4430	0.021	0.5512	No
20	PELI2	8217	4483	0.020	0.5504	No
21	FOXB1	12254 19069	4533	0.020	0.5496	No
22	SHOX2	1802 5432	4663	0.018	0.5444	No
23	HOXC6	22339 2302	4688	0.018	0.5449	No
24	HEPH	24288 2623 2635 2568 2652	4712	0.018	0.5453	No
25	IGF1	3352 9156 3409	5037	0.015	0.5293	No
26	LOX	23438	5182	0.014	0.5229	No
27	COLEC12	23624 8946	5281	0.013	0.5189	No
28	TBX4	5633	5412	0.012	0.5131	No
29	CALD1	4273 8463	5477	0.012	0.5108	No
30	MCC	552	5662	0.011	0.5019	No
31	OTX1	20517	5923	0.010	0.4888	No
32	VIT	23155	6436	0.008	0.4619	No
33	HOXA11	17146	6453	0.008	0.4618	No
34	MYH2	20838	6486	0.008	0.4608	No
35	ODZ1	24168	6808	0.007	0.4442	No
36	ROR1	6472	6889	0.006	0.4405	No
37	NCDN	15756 2487 6471	6897	0.006	0.4407	No
38	TECTA	19159	6934	0.006	0.4394	No
39	HR	3622 9119	7022	0.006	0.4352	No
40	TLE3	5767 19416	7040	0.006	0.4349	No
41	PLUNC	9593	7146	0.006	0.4298	No
42	ADRB1	4357	7214	0.005	0.4267	No
43	PHEX	24024	7498	0.005	0.4119	No
44	IER5	13802	7609	0.004	0.4063	No
45	SEMA5B	9801 22777	7750	0.004	0.3992	No
46	TLX1	23839	7811	0.004	0.3963	No
47	IBSP	16775	7863	0.004	0.3939	No
48	NR4A1	9099	7973	0.003	0.3884	No
49	PITX2	15424 1878	8121	0.003	0.3808	No
50	SLC24A2	8020 13326 8021	8129	0.003	0.3807	No
51	PNRC1	15925	8191	0.003	0.3777	No
52	OSR2	22492	8230	0.003	0.3759	No
53	FOXD3	9088	8237	0.003	0.3759	No
54	TCF1	16416	8726	0.002	0.3497	No
55	FOXP2	4312 17523 8523	8879	0.002	0.3417	No
56	TNMD	24260	9254	0.001	0.3216	No
57	GABRR1	16250	10024	-0.001	0.2801	No
58	SYT10	22157	10031	-0.001	0.2799	No
59	UBXD3	15701	10042	-0.001	0.2794	No
60	HOXD9	14982	10370	-0.001	0.2618	No
61	NEDD4	19384 3101	10684	-0.002	0.2451	No
62	PHTF2	16599	10811	-0.002	0.2385	No
63	PRDM1	19775 3337	11162	-0.003	0.2198	No
64	MSC	13998	11215	-0.003	0.2173	No
65	CD109	6174 10656 19369	11564	-0.003	0.1988	No
66	OTOP3	20599	11846	-0.004	0.1841	No
67	FGF9	8966	11912	-0.004	0.1810	No
68	NNAT	2764 5180	11950	-0.004	0.1794	No
69	ERG	1686 8915	12159	-0.005	0.1686	No
70	ALDH1A2	19386	12280	-0.005	0.1626	No
71	POU3F3	14261	12297	-0.005	0.1623	No
72	AP1G2	2677 21827	12920	-0.007	0.1294	No
73	SLC34A3	14664	12945	-0.007	0.1287	No
74	PDCD1LG2	23892	13058	-0.007	0.1234	No
75	CITED2	5118 14477	13352	-0.008	0.1084	No
76	EVX1	17442	13722	-0.010	0.0894	No
77	RARG	22113	14154	-0.012	0.0673	No
78	PURA	9670	14263	-0.013	0.0627	No
79	KLF12	4960 2637 21732 9228	14343	-0.013	0.0598	No
80	SPRY4	23448	14922	-0.018	0.0304	No
81	PTHR1	5318 18985	14995	-0.019	0.0284	No
82	CLDN18	19028	15092	-0.021	0.0252	No
83	FERD3L	21292	15256	-0.023	0.0187	No
84	TGFB3	10161	15414	-0.026	0.0128	No
85	HOXC4	4864	15715	-0.035	-0.0001	No
86	PDE7A	9544 1788	15984	-0.045	-0.0102	No
87	EYA1	4695 4061	16241	-0.058	-0.0184	No
88	BTBD3	10457 2975 6007 6006	16598	-0.083	-0.0296	No
89	CTCF	18490	16663	-0.090	-0.0243	No
90	ULK1	16436	17149	-0.146	-0.0363	No
91	ZADH2	23501	17577	-0.222	-0.0379	No
92	LEF1	1860 15420	17935	-0.318	-0.0262	No
93	DUSP1	23061	17944	-0.322	0.0046	No
94	SIN3A	5442	17956	-0.325	0.0356	No