Details for gene set V$AP4

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	transDMproB
GeneSet	V$AP4_Q6
Enrichment Score (ES)	0.6284009
Normalized Enrichment Score (NES)	1.4387007
Nominal p-value	0.007788162
FDR q-value	0.51455975
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARID1A	8214 2501 13554	1	5.436	0.2251	Yes
2	TPM3	12233 7209 7208 1790	12	3.461	0.3680	Yes
3	TRAPPC3	6553 16080 2469 11305	107	1.388	0.4204	Yes
4	EMP3	17824 968	139	1.126	0.4653	Yes
5	HSD11B1	9125 4019	205	0.771	0.4937	Yes
6	HMGN2	9095	238	0.678	0.5201	Yes
7	PICALM	18191	284	0.591	0.5421	Yes
8	TMOD4	1816 1884 15509	404	0.471	0.5552	Yes
9	MESDC1	17771	407	0.470	0.5746	Yes
10	MYLK	22778 4213	453	0.441	0.5904	Yes
11	LAT	17643	575	0.379	0.5996	Yes
12	ARHGAP24	16778 3655	761	0.325	0.6030	Yes
13	RAB3A	9681	801	0.316	0.6140	Yes
14	BACH1	8647	806	0.315	0.6268	Yes
15	KLF13	17807	992	0.279	0.6284	Yes
16	PGF	21020	1354	0.217	0.6179	No
17	ESRRA	23802	1519	0.193	0.6170	No
18	VAMP3	15660	1594	0.181	0.6205	No
19	VAT1	11253	2053	0.127	0.6009	No
20	TMOD3	6945	2139	0.118	0.6012	No
21	TNNT2	14113	2210	0.113	0.6021	No
22	ADRBK1	23960	2345	0.100	0.5990	No
23	TRAF4	10217 5796 1400	2395	0.096	0.6003	No
24	LCK	15746	2503	0.088	0.5982	No
25	OBSCN	20434	3108	0.053	0.5677	No
26	XPNPEP1	9310 3677 23645	3623	0.036	0.5413	No
27	ARNT	4413 1857	3750	0.033	0.5359	No
28	RAMP2	20660	3945	0.028	0.5265	No
29	ZNF385	22106 2297	3966	0.028	0.5266	No
30	PTPRS	1507 1565 1602 22928	4239	0.023	0.5128	No
31	ELF4	24162	4302	0.022	0.5104	No
32	EYA3	8936 2352	4500	0.020	0.5006	No
33	PROK2	17057	4560	0.019	0.4982	No
34	WNT2B	15214 1838	4713	0.018	0.4907	No
35	AKAP2	8565	4873	0.016	0.4827	No
36	RASGRF2	21397	4946	0.016	0.4795	No
37	FBXO40	22599 444	5077	0.015	0.4730	No
38	SUV39H2	7232 12263	5083	0.015	0.4734	No
39	CACNA1G	1237 940 20292	5184	0.014	0.4685	No
40	DHRS3	15997	5225	0.014	0.4669	No
41	NANOS1	6858	5453	0.012	0.4551	No
42	JMJD1C	11531 19996	5574	0.012	0.4491	No
43	STARD13	10833	5813	0.010	0.4367	No
44	GRIK3	16083	6067	0.009	0.4234	No
45	NXPH3	20281	6073	0.009	0.4235	No
46	CREB3L1	14521	6110	0.009	0.4219	No
47	RXRG	14063	6283	0.008	0.4129	No
48	LBX1	98 23659	6672	0.007	0.3922	No
49	NPPA	298	6680	0.007	0.3921	No
50	RBMS3	18973	7080	0.006	0.3708	No
51	CADPS	11298	7323	0.005	0.3579	No
52	SYTL2	18190 1539 3730	7347	0.005	0.3569	No
53	PRKACA	18549 3844	7561	0.005	0.3455	No
54	RGS7	13743	7690	0.004	0.3388	No
55	MAP3K13	22814	7749	0.004	0.3358	No
56	DLL3	17912	7850	0.004	0.3305	No
57	PTK7	22959	8032	0.003	0.3209	No
58	ASB5	13322	8077	0.003	0.3186	No
59	INHA	14214	8158	0.003	0.3144	No
60	FOXD3	9088	8237	0.003	0.3103	No
61	RTKN	17394 1156	8301	0.003	0.3070	No
62	BCL2L2	8653 4441	8391	0.003	0.3023	No
63	MID2	24232	8552	0.002	0.2938	No
64	PRKCQ	2873 2831	8799	0.002	0.2805	No
65	HAPLN2	15296	9029	0.001	0.2682	No
66	PLXNB3	24304	9051	0.001	0.2671	No
67	WNT4	16025	9307	0.001	0.2533	No
68	CHRNG	4323	9346	0.001	0.2513	No
69	KCNMA1	4947	9394	0.001	0.2488	No
70	FGF12	1723 22621	9778	0.000	0.2281	No
71	KCNQ4	12247 2533	9819	-0.000	0.2259	No
72	TRPC4	15593	9904	-0.000	0.2214	No
73	DOCK4	10705	10063	-0.001	0.2128	No
74	PALM2	10817 2368	10251	-0.001	0.2028	No
75	FBXO24	12918 3649	10361	-0.001	0.1969	No
76	ZRANB1	6884 11702	10382	-0.001	0.1959	No
77	PABPC5	24077	10409	-0.001	0.1945	No
78	GRIN2B	16957	10419	-0.001	0.1941	No
79	SPOCK2	13585	10447	-0.001	0.1927	No
80	AICDA	17295 1087	10464	-0.001	0.1919	No
81	KCNE1L	24044	10504	-0.001	0.1898	No
82	TNFSF4	14082	10577	-0.001	0.1860	No
83	HOXC12	22343	10660	-0.002	0.1816	No
84	AMPH	3256 21700	10718	-0.002	0.1786	No
85	GNG3	23752	10785	-0.002	0.1751	No
86	WDTC1	10512	11127	-0.003	0.1567	No
87	CPEB3	5539	11300	-0.003	0.1475	No
88	LOXL4	23672	11590	-0.004	0.1320	No
89	ERN1	8137	11948	-0.004	0.1129	No
90	EPOR	19204	11987	-0.004	0.1110	No
91	HOXA6	17150	12169	-0.005	0.1014	No
92	KCNN2	8933 1949	12223	-0.005	0.0988	No
93	SOST	20210	12292	-0.005	0.0953	No
94	ABLIM1	3717 3766 3679	12537	-0.006	0.0823	No
95	WNT9A	5709	12640	-0.006	0.0771	No
96	HFE2	1777 15495	12672	-0.006	0.0756	No
97	PCDH12	7005	12678	-0.006	0.0756	No
98	BCL11B	7190	12701	-0.006	0.0747	No
99	KIRREL2	17889 3922	12711	-0.006	0.0744	No
100	TNRC4	15514	12743	-0.006	0.0730	No
101	SCAMP5	3028 19100	12813	-0.007	0.0696	No
102	GNB3	9027	12921	-0.007	0.0641	No
103	MLLT7	24278	13026	-0.007	0.0587	No
104	NEUROG3	20005	13177	-0.008	0.0509	No
105	CTDSP1	4121 10407	13394	-0.008	0.0396	No
106	PTCH2	9640	13706	-0.010	0.0232	No
107	FGF8	23656	13886	-0.011	0.0139	No
108	EMILIN3	11376	14055	-0.012	0.0053	No
109	ASB16	20644	14122	-0.012	0.0022	No
110	TCF7	1467 20466	14220	-0.012	-0.0025	No
111	PITX3	9571	14234	-0.013	-0.0027	No
112	MYBPH	14130	14312	-0.013	-0.0063	No
113	FRAS1	16788 3589	14430	-0.014	-0.0121	No
114	NES	5162 9454	14445	-0.014	-0.0123	No
115	FOSL2	4733 8978 16878	14693	-0.016	-0.0250	No
116	ANXA8	22046	14704	-0.016	-0.0249	No
117	ARHGEF2	4987	14989	-0.019	-0.0394	No
118	PDE3A	7045	15014	-0.020	-0.0399	No
119	CACNB2	4466 8678	15074	-0.021	-0.0423	No
120	COL7A1	8769 4547	15112	-0.021	-0.0434	No
121	FHL3	16092 2457	15168	-0.022	-0.0455	No
122	HOXB5	20687	15360	-0.025	-0.0548	No
123	PCYT1B	24289	15389	-0.026	-0.0552	No
124	ABHD4	22021	15401	-0.026	-0.0547	No
125	PRICKLE1	8379	15596	-0.031	-0.0639	No
126	HOXC4	4864	15715	-0.035	-0.0689	No
127	GATA3	9004	15851	-0.039	-0.0746	No
128	SOX12	5478	15876	-0.040	-0.0742	No
129	PTPN7	11500	16031	-0.047	-0.0806	No
130	RPS6KB1	7815 1207 13040	16106	-0.051	-0.0825	No
131	UBTF	1313 10052	16125	-0.052	-0.0813	No
132	EYA1	4695 4061	16241	-0.058	-0.0852	No
133	CNNM2	8251	16383	-0.068	-0.0900	No
134	STOML2	15902	16451	-0.072	-0.0906	No
135	BSCL2	23940	16572	-0.081	-0.0938	No
136	FMO5	4730 15489	16629	-0.087	-0.0932	No
137	RUNX1	4481	17055	-0.133	-0.1107	No
138	NDST2	21906	17596	-0.225	-0.1306	No
139	RAB27A	19381	17750	-0.258	-0.1282	No
140	EPHA2	16006	17991	-0.338	-0.1272	No
141	SYTL1	15728	18180	-0.426	-0.1197	No
142	INPPL1	17733 3775	18372	-0.598	-0.1053	No
143	GAS7	20836 1299	18606	-2.859	0.0005	No