Details for gene set V$AMEF2

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$AMEF2_Q6
Enrichment Score (ES)	-0.58789873
Normalized Enrichment Score (NES)	-1.4799086
Nominal p-value	0.002793296
FDR q-value	0.47945237
FWER p-Value	0.968

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FGF13	4720 8963 2627	81	1.558	0.0715	No
2	HMGN2	9095	238	0.678	0.0961	No
3	CDC42EP3	6436	447	0.444	0.1065	No
4	ZFP36L1	4453 4454	557	0.389	0.1195	No
5	CLIC1	23262	601	0.369	0.1352	No
6	MBNL2	21932	626	0.363	0.1515	No
7	ARL6IP2	1496 7090 12093	1298	0.226	0.1262	No
8	HLX1	9093	1511	0.194	0.1241	No
9	GPSN2	18823 3868	1568	0.187	0.1302	No
10	ATP5H	12948	1804	0.157	0.1251	No
11	BIRC2	4397 4398	1839	0.152	0.1307	No
12	PHKA2	8471 24216	1942	0.139	0.1319	No
13	TMEM24	19150	2185	0.115	0.1244	No
14	KPNA3	21797	2238	0.110	0.1269	No
15	B4GALT1	15918	2660	0.078	0.1079	No
16	MYL2	16713	2900	0.063	0.0980	No
17	CDKL5	24019	2917	0.063	0.1002	No
18	P2RX5	1370 20790	3062	0.055	0.0951	No
19	CPNE1	11186	3146	0.052	0.0931	No
20	PPP1R16B	6014	3283	0.046	0.0880	No
21	SOX5	9850 1044 5480 16937	3612	0.036	0.0719	No
22	USP47	6794	3646	0.035	0.0719	No
23	FBXW11	20926	3738	0.033	0.0686	No
24	SMYD1	4452	3893	0.030	0.0617	No
25	CHD2	10847	4086	0.026	0.0525	No
26	USP2	19480 3052 3043	4193	0.024	0.0479	No
27	HOXC6	22339 2302	4688	0.018	0.0220	No
28	DKK1	23700	4692	0.018	0.0227	No
29	RORB	10356	4724	0.018	0.0219	No
30	LMCD1	17337 1117	4760	0.017	0.0209	No
31	CTBP2	17591 1137	4870	0.016	0.0157	No
32	GSC	20990	5247	0.013	-0.0040	No
33	GJB6	21805	5323	0.013	-0.0074	No
34	TBX4	5633	5412	0.012	-0.0116	No
35	SV2A	15498 12250	5548	0.012	-0.0183	No
36	JMJD1C	11531 19996	5574	0.012	-0.0191	No
37	BNC2	15850	5694	0.011	-0.0250	No
38	NFIB	15855	5832	0.010	-0.0320	No
39	HAS2	22293	5921	0.010	-0.0363	No
40	KBTBD5	13020	6016	0.009	-0.0409	No
41	PRRX1	9595 5271	6101	0.009	-0.0450	No
42	PPARGC1A	16533	6148	0.009	-0.0471	No
43	TACR1	1082 17403	6172	0.009	-0.0479	No
44	HOXB6	20688	6175	0.009	-0.0476	No
45	ITGA7	19835	6838	0.007	-0.0831	No
46	CAPN1	23989	6909	0.006	-0.0866	No
47	MAS1	23122	6941	0.006	-0.0880	No
48	LUZP1	6533 11257 2503	6958	0.006	-0.0886	No
49	CACNG3	12029	6984	0.006	-0.0896	No
50	TLE3	5767 19416	7040	0.006	-0.0923	No
51	FST	8985	7050	0.006	-0.0925	No
52	CHRDL1	8180 13504	7299	0.005	-0.1057	No
53	LYN	16281	7301	0.005	-0.1055	No
54	MTUS1	4162 158	7598	0.004	-0.1213	No
55	SOX2	9849 15612	7808	0.004	-0.1325	No
56	NR0B2	16050	7916	0.004	-0.1381	No
57	RGS3	2434 2474 6937 11935 2374 2332 2445 2390	7971	0.003	-0.1409	No
58	NR4A1	9099	7973	0.003	-0.1407	No
59	SNCAIP	12589	8013	0.003	-0.1427	No
60	BHLHB5	15629	8041	0.003	-0.1440	No
61	CKMT2	13350	8076	0.003	-0.1457	No
62	SLC24A2	8020 13326 8021	8129	0.003	-0.1483	No
63	GNAO1	4785 3829	8406	0.003	-0.1632	No
64	HAPLN1	21592	8651	0.002	-0.1763	No
65	ELAVL2	15839	8687	0.002	-0.1781	No
66	NOG	13663	8755	0.002	-0.1816	No
67	NOX3	10322	8801	0.002	-0.1840	No
68	TNNI3K	11495	8887	0.002	-0.1885	No
69	COL13A1	8763	8891	0.002	-0.1886	No
70	ACCN1	20327 1194	9194	0.001	-0.2049	No
71	BCL9L	19475	9246	0.001	-0.2076	No
72	HOXA10	17145 989	9306	0.001	-0.2108	No
73	MYL1	4015	9319	0.001	-0.2114	No
74	SLC4A4	16807 12035 7036	9363	0.001	-0.2137	No
75	RBM8A	12239 7212	9437	0.001	-0.2176	No
76	HIST1H1E	21520	9490	0.001	-0.2204	No
77	SLC3A1	23145	9577	0.000	-0.2250	No
78	DNAJA2	12133 18806	9629	0.000	-0.2278	No
79	MYO9A	11325	9662	0.000	-0.2295	No
80	MYH6	9436	9792	-0.000	-0.2365	No
81	PYY	20207	9798	-0.000	-0.2367	No
82	HOXA2	17151	9807	-0.000	-0.2372	No
83	TTN	14552 2743 14553	9975	-0.000	-0.2462	No
84	UBXD3	15701	10042	-0.001	-0.2498	No
85	SEMA3A	16919	10151	-0.001	-0.2556	No
86	GRIN2B	16957	10419	-0.001	-0.2700	No
87	HOXB8	9111	10475	-0.001	-0.2729	No
88	PACSIN3	14948 8149 2776 2665	10476	-0.001	-0.2728	No
89	USP13	13047	10586	-0.001	-0.2787	No
90	CMYA1	18966	10659	-0.002	-0.2825	No
91	SALL1	18796 12207	10678	-0.002	-0.2834	No
92	NEDD4	19384 3101	10684	-0.002	-0.2836	No
93	GDF8	9411	10719	-0.002	-0.2853	No
94	EDG1	15187	10722	-0.002	-0.2854	No
95	SMARCA1	24165	10996	-0.002	-0.3001	No
96	EDN1	21658	11116	-0.003	-0.3064	No
97	GPR27	13703	11690	-0.004	-0.3373	No
98	IGJ	4903	11802	-0.004	-0.3431	No
99	GTF2A1	2064 8187 8188 13512	11847	-0.004	-0.3453	No
100	FGF9	8966	11912	-0.004	-0.3485	No
101	CNTN1	4538	11938	-0.004	-0.3497	No
102	GABRA6	20491	12023	-0.004	-0.3540	No
103	NRP2	5194 9486 5195	12077	-0.005	-0.3567	No
104	BDNF	14926 2797	12108	-0.005	-0.3581	No
105	UXS1	13965	12121	-0.005	-0.3585	No
106	ASB18	13886	12228	-0.005	-0.3640	No
107	TNNC1	22058	12269	-0.005	-0.3659	No
108	FGF16	24270	12311	-0.005	-0.3679	No
109	SSH3	3709 10890	12472	-0.006	-0.3763	No
110	MID1	5097 5098	12523	-0.006	-0.3787	No
111	HDAC9	21084 2131	12544	-0.006	-0.3795	No
112	SSPN	9246	12670	-0.006	-0.3860	No
113	HFE2	1777 15495	12672	-0.006	-0.3858	No
114	RTN1	4177 2099	12844	-0.007	-0.3947	No
115	RUNX2	4480 8700	12851	-0.007	-0.3947	No
116	ABCA6	1470 20165	13050	-0.007	-0.4051	No
117	CREB5	10551	13237	-0.008	-0.4148	No
118	CASQ2	15477	13610	-0.009	-0.4345	No
119	COL9A1	3950 4549	13837	-0.010	-0.4462	No
120	DLGAP4	2950 10461	13861	-0.011	-0.4470	No
121	OLIG3	20084	14020	-0.011	-0.4550	No
122	GPC4	24153	14100	-0.012	-0.4587	No
123	ASB16	20644	14122	-0.012	-0.4592	No
124	ESRRG	6447	14246	-0.013	-0.4653	No
125	PURA	9670	14263	-0.013	-0.4655	No
126	WIF1	19866	14396	-0.014	-0.4720	No
127	SOX15	9848	14482	-0.014	-0.4760	No
128	CKM	18362	14614	-0.015	-0.4823	No
129	HTR7	23690	14623	-0.015	-0.4820	No
130	FLT1	3483 16287	14676	-0.016	-0.4841	No
131	SDC1	5560 9953	14755	-0.016	-0.4875	No
132	SLC26A9	11560 980 4067	14859	-0.018	-0.4922	No
133	CACNB3	22373 8679	14881	-0.018	-0.4925	No
134	ACTA1	18715	14894	-0.018	-0.4923	No
135	ARHGEF2	4987	14989	-0.019	-0.4964	No
136	CYP26B1	17093	15018	-0.020	-0.4970	No
137	RFX3	9722 5377 3712 3762	15090	-0.021	-0.4998	No
138	SLC35A2	24389	15359	-0.025	-0.5131	No
139	HOXB5	20687	15360	-0.025	-0.5119	No
140	PCYT1B	24289	15389	-0.026	-0.5121	No
141	TGFB3	10161	15414	-0.026	-0.5121	No
142	MRPS18B	7365	15471	-0.028	-0.5138	No
143	STARD7	14866 2722	15495	-0.028	-0.5137	No
144	TPM2	2367 2437	15616	-0.031	-0.5187	No
145	BACE2	1738 22687 1695	15665	-0.033	-0.5197	No
146	CLASP1	14159	15839	-0.039	-0.5272	No
147	LIN28	15723	15852	-0.039	-0.5259	No
148	ELMO3	10629 18495	15855	-0.039	-0.5241	No
149	ETV1	4688 8925 8924	15981	-0.045	-0.5287	No
150	RHOBTB1	12789	16130	-0.052	-0.5342	No
151	HIVEP3	4973	16207	-0.056	-0.5356	No
152	EYA1	4695 4061	16241	-0.058	-0.5346	No
153	CRTAP	18979	16789	-0.102	-0.5593	No
154	RBBP6	5365	17059	-0.133	-0.5673	No
155	PACS1	23975	17105	-0.140	-0.5630	No
156	ENO3	8905	17566	-0.219	-0.5772	Yes
157	ANKMY2	5721 21288	17680	-0.243	-0.5715	Yes
158	BZW2	21081	17960	-0.326	-0.5707	Yes
159	PDLIM1	7023	17983	-0.336	-0.5555	Yes
160	JUN	15832	18245	-0.472	-0.5467	Yes
161	ZDHHC8	11359	18276	-0.498	-0.5240	Yes
162	EHD4	8275	18322	-0.548	-0.4998	Yes
163	NLK	5179 5178	18353	-0.578	-0.4733	Yes
164	INPPL1	17733 3775	18372	-0.598	-0.4451	Yes
165	DCTN1	1100 17392	18464	-0.790	-0.4116	Yes
166	PPP1R10	6972 11960 6971	18483	-0.855	-0.3709	Yes
167	CRHBP	8785	18570	-1.639	-0.2957	Yes
168	NFAT5	3921 7037 12036	18604	-2.808	-0.1607	Yes
169	PABPC4	10510 2418 2548	18611	-3.311	0.0003	Yes