Details for gene set HSA00564_GLYCEROPHOSPHOLIPID

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_LMproB.phenotype_transDMproB_versus_LMproB.cls #transDMproB_versus_LMproB
Phenotype	phenotype_transDMproB_versus_LMproB.cls#transDMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	HSA00564_GLYCEROPHOSPHOLIPID_METABOLISM
Enrichment Score (ES)	-0.6642164
Normalized Enrichment Score (NES)	-1.418915
Nominal p-value	0.028103044
FDR q-value	0.7339541
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GPD2	4773 9014	266	0.627	0.0466	No
2	LYPLA3	18482	479	0.426	0.0765	No
3	AGPAT3	19713	578	0.378	0.1079	No
4	CHKA	23759	1115	0.256	0.1039	No
5	CDIPT	18071	1350	0.218	0.1125	No
6	AGPAT2	2664	2334	0.101	0.0693	No
7	DGKG	4282	2545	0.086	0.0663	No
8	AGPAT4	23384	2978	0.060	0.0488	No
9	PCYT1A	4572	3245	0.048	0.0391	No
10	MYST3	18651	3567	0.038	0.0255	No
11	PTDSS2	11334	3677	0.034	0.0229	No
12	CDS1	16779	3710	0.034	0.0245	No
13	PNPLA3	22406	3858	0.031	0.0195	No
14	PLA2G2F	15700	4012	0.027	0.0139	No
15	DGKE	7069	4206	0.024	0.0058	No
16	NAT5	18601 7496 12597	4232	0.023	0.0067	No
17	GNPAT	18420	4460	0.020	-0.0035	No
18	PLA2G1B	9581	4820	0.017	-0.0212	No
19	CDS2	14837	5160	0.014	-0.0382	No
20	PLA2G12B	20016	5735	0.011	-0.0680	No
21	PLA2G5	9583	6122	0.009	-0.0880	No
22	ETNK2	5653	7353	0.005	-0.1538	No
23	CHPT1	3349 10015	8051	0.003	-0.1910	No
24	LCAT	18762	8410	0.003	-0.2100	No
25	LYPLA1	4107 9580	8453	0.003	-0.2120	No
26	ESCO2	21781	8650	0.002	-0.2224	No
27	PLA2G3	20968	8718	0.002	-0.2258	No
28	DGKB	5722	8953	0.002	-0.2383	No
29	PLD2	20803	9024	0.001	-0.2419	No
30	PLA2G2E	16016	9132	0.001	-0.2475	No
31	PLA2G4A	13809	9405	0.001	-0.2621	No
32	ACHE	16665	9977	-0.000	-0.2928	No
33	PLA2G2A	16017	10085	-0.001	-0.2986	No
34	PTDSS1	21616	10222	-0.001	-0.3058	No
35	CHAT	21882	11371	-0.003	-0.3674	No
36	DGKZ	2836 14522	12556	-0.006	-0.4306	No
37	MYST4	7027 7026 12014 2739	12978	-0.007	-0.4526	No
38	PLA2G2D	16018	13076	-0.007	-0.4571	No
39	PPAP2C	6938	13153	-0.008	-0.4605	No
40	PLA2G10	22658	13349	-0.008	-0.4702	No
41	PLD1	15624	13419	-0.009	-0.4730	No
42	AGPAT1	23275	14506	-0.014	-0.5302	No
43	PHOSPHO1	10700	14578	-0.015	-0.5326	No
44	PPAP2A	21562 3258 3244	14990	-0.019	-0.5528	No
45	NAT6	12131	15049	-0.020	-0.5540	No
46	PCYT1B	24289	15389	-0.026	-0.5697	No
47	LYPLA2	15708	15536	-0.029	-0.5748	No
48	PEMT	20423	15897	-0.041	-0.5902	No
49	ARD1A	2555 7089 12092	16557	-0.080	-0.6179	No
50	GPAM	4795	16906	-0.114	-0.6256	Yes
51	PLA2G6	22209	17123	-0.143	-0.6234	Yes
52	GPD1	22361	17548	-0.217	-0.6252	Yes
53	PPAP2B	7503 16161	18273	-0.497	-0.6160	Yes
54	DGKQ	4287	18307	-0.526	-0.5666	Yes
55	CHKB	4518	18321	-0.547	-0.5142	Yes
56	SH3GLB1	12057 7051	18473	-0.809	-0.4438	Yes
57	DGKA	3359 19589	18482	-0.843	-0.3623	Yes
58	PLA2G12A	1782 7281 1839	18613	-3.804	0.0002	Yes