Details for gene set ORGAN_MORPHOGENESIS[GSEA]

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	transDMproB
GeneSet	ORGAN_MORPHOGENESIS
Enrichment Score (ES)	0.6742078
Normalized Enrichment Score (NES)	1.5749395
Nominal p-value	0.0017452007
FDR q-value	0.19654687
FWER p-Value	0.684

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MYH9	2252 2244	4	6.155	0.1595	Yes
2	SERPINF1	9793	69	3.106	0.2367	Yes
3	THY1	19481	93	2.773	0.3074	Yes
4	ENG	4667	160	2.332	0.3644	Yes
5	DGCR2	4628 8851	164	2.319	0.4244	Yes
6	RHOB	4411	181	2.245	0.4818	Yes
7	VEGFA	22969	368	1.660	0.5149	Yes
8	CUL7	23217	442	1.547	0.5511	Yes
9	TGFB1	18332	479	1.483	0.5876	Yes
10	EGFL7	87 11687 2706	615	1.245	0.6126	Yes
11	RASA1	10174	698	1.106	0.6369	Yes
12	STX2	3583 16365	1059	0.793	0.6380	Yes
13	RUNX1	4481	1221	0.667	0.6466	Yes
14	EMCN	7211	1286	0.627	0.6594	Yes
15	ATPIF1	4429	1310	0.617	0.6742	Yes
16	SOD1	9846	1945	0.341	0.6488	No
17	CCM2	20950	2040	0.312	0.6518	No
18	EGF	15169	2310	0.241	0.6435	No
19	FGD1	24228	2792	0.137	0.6211	No
20	FLI1	4729	2988	0.107	0.6133	No
21	NF1	5165	3219	0.082	0.6030	No
22	IL7	4921	3442	0.063	0.5926	No
23	TLE1	5765 10185 15859	3478	0.061	0.5923	No
24	PAX5	15892	3564	0.055	0.5891	No
25	TLE3	5767 19416	3711	0.046	0.5824	No
26	PF4	16800	3714	0.046	0.5835	No
27	MYH7	21828 4709	3836	0.040	0.5780	No
28	C1GALT1	8246	3933	0.036	0.5737	No
29	PKD2	16772	3944	0.035	0.5741	No
30	VANGL2	4109 8220	4255	0.025	0.5580	No
31	IL18	9172	4373	0.022	0.5522	No
32	ABLIM1	3717 3766 3679	4429	0.021	0.5498	No
33	ROBO4	7895 3064	4440	0.020	0.5498	No
34	GYPC	23474	4445	0.020	0.5501	No
35	HCCS	9079 4842	4459	0.020	0.5499	No
36	PROK2	17057	4625	0.017	0.5414	No
37	CCL2	9788	4864	0.013	0.5289	No
38	PITX2	15424 1878	5080	0.011	0.5176	No
39	STAB1	21892	5143	0.011	0.5145	No
40	ACVRL1	22354	5159	0.011	0.5140	No
41	PLAC1	12079	5400	0.009	0.5012	No
42	COL4A2	18688	5467	0.008	0.4978	No
43	ANGPTL3	16171	5473	0.008	0.4978	No
44	PITX3	9571	6008	0.006	0.4691	No
45	RORB	10356	6016	0.006	0.4688	No
46	EPGN	16798	6039	0.006	0.4678	No
47	FOXN1	20337	6317	0.005	0.4529	No
48	TINAG	3141 19060	6337	0.004	0.4520	No
49	NPPB	15994	6431	0.004	0.4471	No
50	ITGAX	18058	6630	0.003	0.4365	No
51	FGF16	24270	6721	0.003	0.4317	No
52	SFTPB	17414	6818	0.003	0.4266	No
53	COMP	18589	6879	0.003	0.4234	No
54	PAX3	13910	7016	0.002	0.4161	No
55	EREG	4679 16797	7087	0.002	0.4124	No
56	SIX6	21247	7094	0.002	0.4121	No
57	SPRY2	21725	7275	0.002	0.4024	No
58	HEY2	19794	7399	0.001	0.3958	No
59	NOTCH4	23277 9475	7543	0.001	0.3881	No
60	APLP1	17890	7566	0.001	0.3869	No
61	NKX6-1	16463	7883	0.000	0.3698	No
62	LHX1	4995	8140	-0.000	0.3560	No
63	SHH	16581	8203	-0.001	0.3527	No
64	LSR	17877 2176	8459	-0.001	0.3389	No
65	EPHB4	4676	8759	-0.002	0.3228	No
66	TBX1	10039 5630	8806	-0.002	0.3203	No
67	PTCH1	5304	8817	-0.002	0.3198	No
68	FABP1	17420	8820	-0.002	0.3198	No
69	IL17F	13992	9150	-0.003	0.3021	No
70	AMOT	11341 24037 6587	9351	-0.003	0.2913	No
71	ONECUT2	10346	9540	-0.004	0.2813	No
72	PDX1	16621	9556	-0.004	0.2805	No
73	MSX1	16547	9674	-0.004	0.2743	No
74	GLMN	16452 3562	9712	-0.004	0.2724	No
75	PLG	1593 23383	9797	-0.004	0.2680	No
76	SCG2	5410 14425	9812	-0.004	0.2674	No
77	NPR1	9480	9833	-0.005	0.2664	No
78	COL9A1	3950 4549	9996	-0.005	0.2578	No
79	PAX6	5223	10062	-0.005	0.2544	No
80	FOXC1	21676	10271	-0.006	0.2433	No
81	COL4A3	8766	10340	-0.006	0.2398	No
82	ZIC1	19040	10643	-0.007	0.2236	No
83	TNFSF12	10209	10724	-0.007	0.2195	No
84	FGF10	4719 8962	10747	-0.007	0.2185	No
85	DCN	19897 4601 8840 3366	10767	-0.007	0.2176	No
86	CRX	17961 4694	11115	-0.009	0.1991	No
87	SPHK1	5484 1266 1402	11415	-0.010	0.1832	No
88	DSCAML1	4338 13224	11504	-0.010	0.1787	No
89	COL18A1	19719 3360	11656	-0.011	0.1708	No
90	CHRNA7	17808	11963	-0.012	0.1546	No
91	TLE2	3378	12031	-0.013	0.1513	No
92	POU1F1	5257	12059	-0.013	0.1501	No
93	SPINK5	23569	12405	-0.016	0.1319	No
94	NOTCH2	15485	12491	-0.016	0.1277	No
95	LHX3	2761 4996	12605	-0.017	0.1220	No
96	MYH6	9436	12697	-0.018	0.1176	No
97	PAX4	17199	12891	-0.020	0.1077	No
98	FGF2	15608	13003	-0.021	0.1022	No
99	LY6H	6244 22256 10732	13070	-0.022	0.0992	No
100	ELN	8896	13122	-0.022	0.0970	No
101	TGFB3	10161	13172	-0.023	0.0950	No
102	GAA	20575	13324	-0.025	0.0874	No
103	COL5A3	19219	13332	-0.025	0.0877	No
104	AES	19925 478	13431	-0.026	0.0831	No
105	CDX1	23429	13584	-0.029	0.0756	No
106	PML	3015 3074 3020 5270	13898	-0.034	0.0596	No
107	TBX3	16723	14201	-0.041	0.0443	No
108	CDH13	4506 3826	14375	-0.046	0.0361	No
109	TBX4	5633	14442	-0.048	0.0338	No
110	GLI2	13859	14477	-0.049	0.0333	No
111	HEY1	15378	14499	-0.051	0.0334	No
112	CANX	4474	14714	-0.060	0.0234	No
113	HTATIP2	18232	14987	-0.074	0.0106	No
114	MYBPC3	9434	15228	-0.092	0.0000	No
115	NCL	5153 13899	15284	-0.096	-0.0004	No
116	SYK	21636	15422	-0.112	-0.0049	No
117	PCSK9	15822	15587	-0.131	-0.0104	No
118	PROX1	9623	15932	-0.187	-0.0242	No
119	DGCR6	22831	15992	-0.198	-0.0222	No
120	TNNI3	89	16231	-0.246	-0.0287	No
121	HRAS	4868	16569	-0.329	-0.0384	No
122	RNH1	17562	16813	-0.402	-0.0411	No
123	GNPAT	18420	17262	-0.583	-0.0502	No
124	BAX	17832	17840	-0.932	-0.0572	No
125	TGFB2	5743	17912	-0.982	-0.0356	No
126	BTG1	4458 4457 8663	17932	-0.993	-0.0108	No
127	ANGPTL4	1504 7178	18408	-1.840	0.0112	No