Details for gene set CELLULAR_BIOSYNTHETIC

Table: GSEA Results Summary

Dataset	Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos
Phenotype	phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos
Upregulated in class	DMpreB
GeneSet	CELLULAR_BIOSYNTHETIC_PROCESS
Enrichment Score (ES)	-0.5862302
Normalized Enrichment Score (NES)	-1.5304878
Nominal p-value	0.002624672
FDR q-value	0.15922225
FWER p-Value	0.955

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RPL3L	23354	51	3.504	0.0242	No
2	LTB	23259	227	2.094	0.0308	No
3	AARS	10630 6151	255	2.001	0.0448	No
4	EBI3	23193	268	1.949	0.0591	No
5	CHST3	19760	328	1.769	0.0695	No
6	HBS1L	20076 12127 7119	386	1.629	0.0790	No
7	IL10	14145 1510 1553 22902	408	1.592	0.0901	No
8	FADS1	23933	416	1.578	0.1019	No
9	APBB1	17705	528	1.406	0.1067	No
10	EIF4G3	10517	646	1.196	0.1095	No
11	RRBP1	8176 14411	647	1.196	0.1187	No
12	DDAH2	23263	842	0.958	0.1155	No
13	HSD3B7	4158	990	0.840	0.1140	No
14	AP3D1	19690	1057	0.794	0.1165	No
15	FADS2	7127	1089	0.767	0.1207	No
16	MAST2	9423	1141	0.725	0.1235	No
17	HS6ST1	14274	1244	0.654	0.1230	No
18	HPRT1	2655 24339 408	1247	0.653	0.1279	No
19	NFE2L1	9457	1392	0.578	0.1245	No
20	PPARGC1A	16533	1402	0.572	0.1285	No
21	SPN	452 5493	1442	0.553	0.1306	No
22	TSPO	2204 22408	1478	0.538	0.1328	No
23	EIF2AK3	17421	1545	0.505	0.1331	No
24	ARPP-19	19379	1780	0.399	0.1235	No
25	GCH1	9008 4762	1870	0.365	0.1214	No
26	GAMT	19698	1907	0.354	0.1222	No
27	EEF2K	18101	1910	0.353	0.1248	No
28	TLR7	24004	1918	0.350	0.1271	No
29	SOD1	9846	1945	0.341	0.1283	No
30	RPL28	5392	2053	0.309	0.1249	No
31	AGPAT2	2664	2164	0.276	0.1210	No
32	RPL22	15979	2234	0.259	0.1192	No
33	RPL11	12450	2322	0.239	0.1163	No
34	OAZ1	9498	2327	0.238	0.1180	No
35	RPL39	12496	2355	0.232	0.1183	No
36	GMDS	21496	2362	0.231	0.1197	No
37	RPS27	12183	2407	0.220	0.1190	No
38	RPL15	12355	2454	0.210	0.1181	No
39	LTA4H	19906 3374	2491	0.202	0.1177	No
40	NDUFA13	7400	2525	0.195	0.1174	No
41	ALAS2	24229	2650	0.166	0.1120	No
42	RPL5	9746	2846	0.129	0.1023	No
43	EIF4H	16352	2905	0.118	0.1001	No
44	RPS11	11317	2987	0.107	0.0965	No
45	RPL35	12360	3096	0.096	0.0914	No
46	DMD	24295 2647	3129	0.092	0.0903	No
47	FURIN	9538	3375	0.068	0.0775	No
48	RPL13	11284	3417	0.065	0.0758	No
49	RPL7	9748	3454	0.062	0.0743	No
50	UROS	17588 1227	3612	0.052	0.0661	No
51	PMM2	1670 1666 1707 22863 1756	3647	0.049	0.0647	No
52	PAIP2	12593	3816	0.041	0.0558	No
53	TSC1	7235	3868	0.039	0.0534	No
54	GCLC	19374	3872	0.039	0.0535	No
55	TLR6	215 16528	3894	0.038	0.0526	No
56	GHRL	1183 17040	3930	0.036	0.0510	No
57	RPS5	18391	4016	0.032	0.0466	No
58	RPL18A	13358	4031	0.032	0.0461	No
59	GLCE	13526	4246	0.025	0.0346	No
60	CD28	14239 4092	4299	0.024	0.0320	No
61	ADORA2A	8557	4438	0.020	0.0246	No
62	CYP11A1	4580	4478	0.020	0.0227	No
63	EIF2C1	10672	4645	0.016	0.0137	No
64	BCL10	15397	4654	0.016	0.0134	No
65	TYMS	5810 5809 3606 3598	4667	0.016	0.0129	No
66	UCN2	10308	4773	0.014	0.0073	No
67	PDZD3	19153	5012	0.012	-0.0056	No
68	DCT	4603 21723	5145	0.011	-0.0127	No
69	ABCA1	15881	5304	0.010	-0.0212	No
70	CYP7B1	15373	5488	0.008	-0.0311	No
71	DHRS9	6308 2887	5886	0.006	-0.0527	No
72	EIF2AK4	14909	6099	0.005	-0.0642	No
73	INHA	14214	6218	0.005	-0.0706	No
74	CYP27B1	8831 3426	6334	0.004	-0.0768	No
75	PNPLA3	22406	6407	0.004	-0.0807	No
76	NQO1	18754 3836	6596	0.004	-0.0909	No
77	TLR9	19331 3127	6759	0.003	-0.0997	No
78	GLA	4362	6808	0.003	-0.1023	No
79	PAH	19911	6898	0.003	-0.1071	No
80	EREG	4679 16797	7087	0.002	-0.1174	No
81	TLR8	9308	7223	0.002	-0.1247	No
82	IL12B	20918	7262	0.002	-0.1268	No
83	GCK	20535	7266	0.002	-0.1269	No
84	CHST8	12754	7301	0.002	-0.1288	No
85	COQ3	16262	7355	0.001	-0.1316	No
86	GATM	14451	7490	0.001	-0.1389	No
87	CHST9	7727	7558	0.001	-0.1426	No
88	SAMD4A	13211	7862	0.000	-0.1591	No
89	PLOD1	15679	7917	0.000	-0.1620	No
90	BMP6	8659	8050	-0.000	-0.1692	No
91	IL27	17636	8174	-0.000	-0.1759	No
92	ALDH18A1	23682	8398	-0.001	-0.1880	No
93	TNIP1	12192 20450 1320	8527	-0.001	-0.1950	No
94	CPOX	1740 8780	8603	-0.001	-0.1991	No
95	FECH	1975 23419 1964	8618	-0.001	-0.1998	No
96	EIF4A2	4660 1679 1645	8669	-0.002	-0.2025	No
97	AK5	6042	8951	-0.002	-0.2178	No
98	GHSR	1810 15625	9050	-0.003	-0.2231	No
99	INHBB	13858	9069	-0.003	-0.2241	No
100	IL17F	13992	9150	-0.003	-0.2284	No
101	PFKFB1	9552	9249	-0.003	-0.2337	No
102	IL4	9174	9384	-0.003	-0.2410	No
103	ADK	3302 3454 8555	9439	-0.003	-0.2439	No
104	ALDH9A1	14064	9491	-0.004	-0.2467	No
105	BBOX1	5010 9290	9678	-0.004	-0.2568	No
106	GLMN	16452 3562	9712	-0.004	-0.2586	No
107	PLCE1	13156	9883	-0.005	-0.2678	No
108	DAZL	22944	9899	-0.005	-0.2686	No
109	TLR3	18884	10013	-0.005	-0.2747	No
110	IL9	21444	10313	-0.006	-0.2909	No
111	DEFB103A	18665	10463	-0.006	-0.2990	No
112	RPS3	6549 11295	10822	-0.007	-0.3184	No
113	IL6	16895	10903	-0.008	-0.3227	No
114	PEX7	19808 3305	11085	-0.008	-0.3325	No
115	GRM8	4805	11094	-0.008	-0.3329	No
116	CYP11B2	24574	11141	-0.009	-0.3353	No
117	UGDH	10249	11297	-0.009	-0.3437	No
118	ALAS1	19013	11373	-0.010	-0.3477	No
119	MAT2B	20494 1431	11388	-0.010	-0.3484	No
120	TNFRSF8	2373 5784	11514	-0.010	-0.3551	No
121	NDST1	23430 4885	11558	-0.010	-0.3574	No
122	TYR	17763	11683	-0.011	-0.3641	No
123	RPL18	450 5390	11686	-0.011	-0.3641	No
124	CDO1	8731	11724	-0.011	-0.3660	No
125	HSD11B2	4872	11743	-0.011	-0.3669	No
126	BRCA1	20213	11747	-0.011	-0.3670	No
127	TLR1	10190	11845	-0.012	-0.3722	No
128	AKR1D1	17483	11944	-0.012	-0.3774	No
129	MTRF1	3413 21949	12067	-0.013	-0.3840	No
130	HS3ST3B1	7054	12311	-0.015	-0.3971	No
131	YARS	16071	12601	-0.017	-0.4127	No
132	EGFR	1329 20944	12610	-0.017	-0.4130	No
133	CYP39A1	1538 23232	12733	-0.018	-0.4195	No
134	GPR143	24224	12878	-0.020	-0.4272	No
135	BOLL	7960	12946	-0.020	-0.4307	No
136	RPS6KB2	7198	13037	-0.021	-0.4354	No
137	BACE2	1738 22687 1695	13135	-0.022	-0.4405	No
138	AKT1	8568	13176	-0.023	-0.4425	No
139	PPOX	13761 4104	13267	-0.024	-0.4473	No
140	RPL19	9736	13379	-0.026	-0.4531	No
141	HPGD	4867	13478	-0.027	-0.4582	No
142	PTGS1	2726 5316 15028	13665	-0.030	-0.4681	No
143	RPL26	9739	13758	-0.032	-0.4729	No
144	SFTPD	21867	13834	-0.033	-0.4767	No
145	RPL41	12611	13922	-0.035	-0.4812	No
146	RPS10	12464	14107	-0.039	-0.4909	No
147	FOXP3	9804 5426	14157	-0.040	-0.4933	No
148	RPL24	12664	14271	-0.043	-0.4991	No
149	CHST11	19921	14312	-0.044	-0.5009	No
150	RPL37	12502 7421 22521	14583	-0.054	-0.5152	No
151	HSD3B1	15227	14622	-0.055	-0.5169	No
152	YBX2	20818	14660	-0.058	-0.5185	No
153	RPS17	9753	14884	-0.068	-0.5301	No
154	PAIP1	21556	14971	-0.073	-0.5342	No
155	RPL8	22437	14981	-0.074	-0.5341	No
156	TLR4	2329 10191 5770	15002	-0.075	-0.5346	No
157	AGPAT1	23275	15026	-0.077	-0.5353	No
158	PTGDS	14658	15078	-0.080	-0.5374	No
159	EXT1	22297	15082	-0.081	-0.5370	No
160	SLC5A7	22938	15164	-0.087	-0.5407	No
161	APOA2	8615 4044	15270	-0.095	-0.5457	No
162	EIF2B2	21204	15373	-0.106	-0.5505	No
163	MTIF2	13354	15453	-0.115	-0.5539	No
164	RPL23A	11193	15456	-0.115	-0.5531	No
165	EEF1A1	38 38 8879	15507	-0.121	-0.5549	No
166	HSPB1	4879	15693	-0.146	-0.5638	No
167	ELA2	11925 8893	15715	-0.149	-0.5638	No
168	UPF1	9718 18855	15822	-0.166	-0.5683	No
169	RPL3	11330	15875	-0.177	-0.5698	No
170	PDSS1	15106	15963	-0.192	-0.5731	No
171	ABCF1	22996 10329 5897	16149	-0.225	-0.5814	No
172	RPS3A	9755	16163	-0.228	-0.5804	No
173	DGAT2	17748	16212	-0.239	-0.5811	No
174	EIF4B	13279 7979	16251	-0.250	-0.5813	No
175	RPL7A	11312	16343	-0.270	-0.5841	Yes
176	PYCR1	20111	16377	-0.279	-0.5838	Yes
177	FARS2	21666	16379	-0.279	-0.5817	Yes
178	BCAT1	1042 4434	16416	-0.287	-0.5814	Yes
179	TSTA3	22253	16419	-0.288	-0.5793	Yes
180	NR5A1	14597	16422	-0.289	-0.5772	Yes
181	ADM	18125	16453	-0.297	-0.5766	Yes
182	SARS2	5	16460	-0.298	-0.5746	Yes
183	BCL3	8654	16506	-0.311	-0.5747	Yes
184	PTGES3	7101 12102	16519	-0.315	-0.5729	Yes
185	CHST12	16642	16599	-0.338	-0.5746	Yes
186	ADCY7	8552 448	16602	-0.340	-0.5721	Yes
187	MRPL51	12361 7301	16628	-0.348	-0.5707	Yes
188	MOCS2	21558	16634	-0.351	-0.5683	Yes
189	PTS	19126	16678	-0.361	-0.5679	Yes
190	PAICS	16820	16711	-0.368	-0.5668	Yes
191	EIF4G2	1908 8892	16768	-0.389	-0.5668	Yes
192	SPR	17091	16796	-0.396	-0.5652	Yes
193	RPL29	9741	16894	-0.433	-0.5672	Yes
194	RPS2	9279	16943	-0.452	-0.5663	Yes
195	MRPL23	9738	17013	-0.476	-0.5664	Yes
196	RPL31	14267	17067	-0.496	-0.5655	Yes
197	HSP90AB1	4880 9130 4881	17075	-0.499	-0.5620	Yes
198	RPL6	9747	17100	-0.508	-0.5594	Yes
199	EIF4A3	9647	17175	-0.539	-0.5593	Yes
200	SLC25A10	6572	17194	-0.548	-0.5560	Yes
201	DEGS1	8850	17199	-0.550	-0.5520	Yes
202	COASY	12953	17250	-0.577	-0.5503	Yes
203	COX15	5931	17295	-0.598	-0.5481	Yes
204	ATF4	22417 2239	17300	-0.600	-0.5437	Yes
205	SCYE1	8897	17351	-0.620	-0.5416	Yes
206	PET112L	1824 15563 1819	17355	-0.621	-0.5370	Yes
207	METAP1	15154	17357	-0.622	-0.5323	Yes
208	COPS5	4117 14002	17389	-0.637	-0.5291	Yes
209	MRPL10	20681	17406	-0.648	-0.5249	Yes
210	RPS19	5398	17418	-0.653	-0.5205	Yes
211	NACA	9444 5147	17459	-0.673	-0.5175	Yes
212	UMPS	22606 1760	17470	-0.683	-0.5128	Yes
213	ALAD	15866	17498	-0.695	-0.5089	Yes
214	WARS	2085 20984	17532	-0.718	-0.5052	Yes
215	COX10	20408	17534	-0.719	-0.4997	Yes
216	RPL14	19267	17549	-0.733	-0.4948	Yes
217	MRPL52	22019	17561	-0.741	-0.4897	Yes
218	RPL21	9737 16624 5391	17569	-0.745	-0.4843	Yes
219	EIF2B4	16574	17589	-0.755	-0.4795	Yes
220	RPL4	7499 19411	17597	-0.760	-0.4741	Yes
221	MRPS24	12262	17643	-0.792	-0.4704	Yes
222	EIF2AK1	4869	17689	-0.831	-0.4665	Yes
223	KARS	18738	17727	-0.854	-0.4619	Yes
224	DHPS	3815	17729	-0.854	-0.4554	Yes
225	MRPL55	20864	17759	-0.886	-0.4501	Yes
226	GMPS	15578	17789	-0.909	-0.4447	Yes
227	GCLM	9019	17836	-0.930	-0.4401	Yes
228	TUFM	10608	17864	-0.943	-0.4343	Yes
229	MRPS7	20595	17878	-0.953	-0.4276	Yes
230	DPH1	4375 8580 8581	17895	-0.966	-0.4211	Yes
231	TGFB2	5743	17912	-0.982	-0.4144	Yes
232	ACN9	12920	17977	-1.046	-0.4098	Yes
233	FARSB	13909	18003	-1.082	-0.4028	Yes
234	ETF1	23467	18013	-1.092	-0.3949	Yes
235	DDX25	19184	18033	-1.115	-0.3873	Yes
236	IRF4	21679	18156	-1.281	-0.3841	Yes
237	RPL30	9742	18161	-1.285	-0.3744	Yes
238	EIF5A	11345 20379 6590	18187	-1.340	-0.3655	Yes
239	HRSP12	9123 9122 4870 9638	18197	-1.350	-0.3556	Yes
240	EIF2B1	16368 3458	18250	-1.416	-0.3475	Yes
241	EIF1	23563	18278	-1.468	-0.3377	Yes
242	MIF	9387	18286	-1.491	-0.3265	Yes
243	RARS	20496	18316	-1.556	-0.3161	Yes
244	PPAT	6081	18323	-1.571	-0.3044	Yes
245	GUK1	20432	18334	-1.590	-0.2927	Yes
246	EIF5	5736	18356	-1.677	-0.2809	Yes
247	PRG3	14971	18379	-1.748	-0.2686	Yes
248	EIF2B3	16118	18455	-2.083	-0.2566	Yes
249	RPL27A	11181 6467 18130	18477	-2.186	-0.2410	Yes
250	EIF2B5	1719 22822	18488	-2.245	-0.2242	Yes
251	CTPS	2514 15772	18542	-2.625	-0.2069	Yes
252	COQ7	17664	18543	-2.636	-0.1866	Yes
253	CHST7	24372	18552	-2.804	-0.1654	Yes
254	DARS	10375 13846	18561	-2.907	-0.1434	Yes
255	MRPL3	3116 19335	18579	-3.249	-0.1193	Yes
256	HSP90AA1	4883 4882 9131	18597	-4.087	-0.0888	Yes
257	PABPC4	10510 2418 2548	18607	-4.643	-0.0535	Yes
258	RPL38	12562 20606 7475	18614	-7.000	0.0001	Yes