Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_04_transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB.phenotype_transDMproB_versus_DMpreB.cls #transDMproB_versus_DMpreB_repos |
| Phenotype | phenotype_transDMproB_versus_DMpreB.cls#transDMproB_versus_DMpreB_repos |
| Upregulated in class | DMpreB |
| GeneSet | REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_INITIATION_AND_PROMOTER_CLEARANCE |
| Enrichment Score (ES) | -0.7861731 |
| Normalized Enrichment Score (NES) | -1.5578644 |
| Nominal p-value | 0.0041237115 |
| FDR q-value | 0.06581172 |
| FWER p-Value | 0.767 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | TAF12 | 2537 16058 2338 | 976 | 0.849 | 0.0012 | No | ||
| 2 | GTF2A1 | 2064 8187 8188 13512 | 4590 | 0.017 | -0.1922 | No | ||
| 3 | POLR2C | 9750 | 5939 | 0.006 | -0.2643 | No | ||
| 4 | ERCC2 | 1549 18363 3812 | 7385 | 0.001 | -0.3420 | No | ||
| 5 | TAF4 | 14319 | 8626 | -0.001 | -0.4086 | No | ||
| 6 | POLR2B | 16817 | 10051 | -0.005 | -0.4849 | No | ||
| 7 | CDK7 | 21365 | 11644 | -0.011 | -0.5699 | No | ||
| 8 | GTF2A2 | 10654 | 12256 | -0.014 | -0.6018 | No | ||
| 9 | TAF9 | 3213 8433 | 12398 | -0.016 | -0.6084 | No | ||
| 10 | TAF13 | 8288 | 13663 | -0.030 | -0.6745 | No | ||
| 11 | GTF2H1 | 4069 18236 | 13954 | -0.036 | -0.6879 | No | ||
| 12 | GTF2B | 10489 | 14615 | -0.055 | -0.7199 | No | ||
| 13 | POLR2A | 5394 | 15732 | -0.152 | -0.7704 | Yes | ||
| 14 | MNAT1 | 9396 2161 | 15837 | -0.169 | -0.7653 | Yes | ||
| 15 | GTF2F1 | 13599 | 15863 | -0.174 | -0.7557 | Yes | ||
| 16 | POLR2I | 12839 | 15977 | -0.195 | -0.7494 | Yes | ||
| 17 | TAF6 | 16322 891 | 16661 | -0.359 | -0.7635 | Yes | ||
| 18 | TAF10 | 10785 | 16670 | -0.360 | -0.7411 | Yes | ||
| 19 | TAF11 | 12733 | 16877 | -0.426 | -0.7252 | Yes | ||
| 20 | ERCC3 | 23605 | 16956 | -0.457 | -0.7006 | Yes | ||
| 21 | TAF5 | 23833 5934 3759 | 16975 | -0.465 | -0.6721 | Yes | ||
| 22 | CCNH | 7322 | 17056 | -0.491 | -0.6454 | Yes | ||
| 23 | GTF2E2 | 18635 | 17340 | -0.615 | -0.6217 | Yes | ||
| 24 | POLR2J | 16672 | 17504 | -0.698 | -0.5863 | Yes | ||
| 25 | POLR2G | 23753 | 17605 | -0.763 | -0.5435 | Yes | ||
| 26 | GTF2E1 | 22597 | 17659 | -0.808 | -0.4952 | Yes | ||
| 27 | GTF2H3 | 5551 | 17720 | -0.851 | -0.4447 | Yes | ||
| 28 | GTF2H2 | 6236 | 17906 | -0.975 | -0.3930 | Yes | ||
| 29 | TBP | 671 1554 | 17966 | -1.031 | -0.3310 | Yes | ||
| 30 | GTF2F2 | 21750 | 18207 | -1.358 | -0.2580 | Yes | ||
| 31 | POLR2H | 10888 | 18300 | -1.513 | -0.1673 | Yes | ||
| 32 | POLR2E | 3325 19699 | 18562 | -2.914 | 0.0029 | Yes |
