Details for gene set CYTOSKELETON_ORGANIZATION_AND

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	CYTOSKELETON_ORGANIZATION_AND_BIOGENESIS
Enrichment Score (ES)	-0.6073559
Normalized Enrichment Score (NES)	-1.488881
Nominal p-value	0.0
FDR q-value	0.38826728
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ANLN	7581 3138 12730	363	1.556	0.0097	No
2	RCC1	15735	655	1.132	0.0153	No
3	TUBG1	20662	1021	0.790	0.0104	No
4	KIF23	19091	1107	0.731	0.0195	No
5	ATP2C1	10660 6178	1157	0.698	0.0301	No
6	TUBGCP2	17576	1259	0.639	0.0366	No
7	KPNA2	9245	1363	0.588	0.0422	No
8	NUBP1	11171 22860	1507	0.526	0.0443	No
9	HOOK3	18903 6734	1658	0.468	0.0450	No
10	FGD6	19901	1659	0.467	0.0538	No
11	SOD1	9846	1769	0.431	0.0560	No
12	KPTN	18385	1809	0.411	0.0617	No
13	MYH9	2252 2244	1871	0.386	0.0657	No
14	CDC42BPB	20982	1959	0.357	0.0677	No
15	KIF4A	9221 24281	1988	0.348	0.0727	No
16	FLNB	13742	2037	0.331	0.0764	No
17	STMN1	9261	2099	0.313	0.0790	No
18	MAP1S	11279	2376	0.233	0.0684	No
19	CFL1	4516	2394	0.228	0.0718	No
20	LIMK1	16350	2527	0.190	0.0682	No
21	DOCK2	8243	2758	0.147	0.0585	No
22	RHOT1	12227	2784	0.141	0.0598	No
23	THY1	19481	2833	0.132	0.0597	No
24	DLG1	22793 1672	2996	0.108	0.0530	No
25	CAPG	17411	3296	0.074	0.0382	No
26	AP1M2	19209 8600 4393	3308	0.073	0.0389	No
27	MAPT	9420 1347	3342	0.071	0.0385	No
28	TTK	19366	3392	0.067	0.0371	No
29	RHOJ	21241	3468	0.061	0.0342	No
30	FSCN1	16637	3469	0.061	0.0353	No
31	FLNA	24129	3592	0.054	0.0297	No
32	APOE	8618	3698	0.049	0.0250	No
33	GHSR	1810 15625	3850	0.043	0.0176	No
34	EVL	21156	3935	0.040	0.0138	No
35	ARPC1A	3541 16628 3519	3988	0.038	0.0117	No
36	WASF1	13514	4070	0.036	0.0080	No
37	PLEK2	21033	4234	0.031	-0.0003	No
38	BCAR1	18741	4267	0.031	-0.0014	No
39	TSC1	7235	4273	0.030	-0.0011	No
40	NF2	1222 5166	4275	0.030	-0.0006	No
41	ABL1	2693 4301 2794	4331	0.029	-0.0030	No
42	PAK1	9527	4349	0.029	-0.0034	No
43	ANK3	8591 3445 3304 3381	4426	0.027	-0.0070	No
44	FGD4	10306 5870 1717 1669 1700	4454	0.027	-0.0080	No
45	MID1	5097 5098	4528	0.025	-0.0115	No
46	RHOF	16379	5016	0.019	-0.0375	No
47	ARFIP2	1226 17702	5367	0.015	-0.0562	No
48	RND3	13181	5624	0.013	-0.0698	No
49	NEBL	14678 2691	5648	0.013	-0.0708	No
50	MYH6	9436	5731	0.012	-0.0750	No
51	CCL3	20317	5756	0.012	-0.0761	No
52	NEFL	9459	5801	0.012	-0.0783	No
53	DYNC1I1	17528	5890	0.011	-0.0828	No
54	TTN	14552 2743 14553	5958	0.011	-0.0863	No
55	MYOZ1	21907	5978	0.011	-0.0871	No
56	NCK1	9447 5152	6001	0.011	-0.0881	No
57	RAC3	20561	6105	0.010	-0.0935	No
58	PRKG1	5289	6119	0.010	-0.0940	No
59	KISS1	6603	6435	0.009	-0.1109	No
60	KIF1A	9216	6456	0.009	-0.1118	No
61	RHOA	8624 4409 4410	6499	0.009	-0.1139	No
62	CXCL12	9792 1182 1031	6882	0.007	-0.1345	No
63	NLGN1	15368	6911	0.007	-0.1359	No
64	MRAS	9409	7136	0.006	-0.1479	No
65	CDC42	4503 8722 4504 2465	7364	0.005	-0.1601	No
66	MYH10	8077	7678	0.005	-0.1770	No
67	MAST1	12143	7711	0.005	-0.1786	No
68	SSH1	10540	8097	0.004	-0.1994	No
69	APBA1	11483	8189	0.003	-0.2043	No
70	CDC42EP5	17991	8366	0.003	-0.2138	No
71	ACTA1	18715	8440	0.003	-0.2177	No
72	CLASP1	14159	8552	0.002	-0.2237	No
73	CDC42BPA	10384	8920	0.001	-0.2436	No
74	DNAJB6	6246 3538	9087	0.001	-0.2525	No
75	TESK2	10504	9170	0.001	-0.2570	No
76	PLD2	20803	9178	0.001	-0.2573	No
77	FGD1	24228	9342	0.000	-0.2662	No
78	SNAP23	2853 14893	9419	0.000	-0.2703	No
79	SEPT5	9598	9438	0.000	-0.2712	No
80	PYY	20207	9515	-0.000	-0.2754	No
81	KIFAP3	3962 14078 9224	9555	-0.000	-0.2775	No
82	CLASP2	13338	9834	-0.001	-0.2925	No
83	PACSIN2	2312	10040	-0.001	-0.3036	No
84	OPA1	13169 22800 7894	10063	-0.001	-0.3048	No
85	ADRA2A	4355	10205	-0.002	-0.3124	No
86	MTSS1	5585 22285	10467	-0.002	-0.3265	No
87	KIF5B	4955 2031	10526	-0.003	-0.3296	No
88	NEXN	12737 1903	10587	-0.003	-0.3328	No
89	DSTN	14823	10605	-0.003	-0.3337	No
90	TAOK2	10610 3794	10674	-0.003	-0.3373	No
91	KIF5A	9222	10720	-0.003	-0.3397	No
92	CXCL1	9044	10817	-0.003	-0.3448	No
93	MYH11	22656	11302	-0.005	-0.3710	No
94	TUBGCP5	6123 2197	11351	-0.005	-0.3735	No
95	FSCN2	20569	11496	-0.005	-0.3812	No
96	KIF11	23873	11575	-0.006	-0.3853	No
97	MARK4	10572	11576	-0.006	-0.3852	No
98	ARHGEF17	17737	11587	-0.006	-0.3857	No
99	ABI2	4037 6830	11849	-0.006	-0.3997	No
100	GHRL	1183 17040	12030	-0.007	-0.4093	No
101	DBN1	21452	12198	-0.008	-0.4182	No
102	SORBS3	21766	12235	-0.008	-0.4200	No
103	UXT	5837 10267	12291	-0.008	-0.4228	No
104	VIL1	14224	12320	-0.008	-0.4242	No
105	TNXB	1557 8174 878 8175	12365	-0.009	-0.4264	No
106	MARK1	5955	12495	-0.009	-0.4333	No
107	KRT20	12410	12514	-0.009	-0.4341	No
108	DES	14215	12630	-0.010	-0.4401	No
109	ARHGEF2	4987	12818	-0.011	-0.4500	No
110	PAFAH1B1	1340 5220 9524	12851	-0.011	-0.4516	No
111	PCLO	11207 6495	13266	-0.014	-0.4737	No
112	PLA2G1B	9581	13366	-0.015	-0.4788	No
113	SMC3	8811 23815 8812 4571	13400	-0.015	-0.4804	No
114	SPTBN4	13471 1104	13558	-0.016	-0.4886	No
115	FGD5	10555 17352	13614	-0.017	-0.4912	No
116	AMOT	11341 24037 6587	13661	-0.017	-0.4934	No
117	CRK	4559 1249	13772	-0.019	-0.4990	No
118	DST	3934 3984 4644 3976 14281 4070 4020 4008 4040	13776	-0.019	-0.4988	No
119	WASF3	16625	13817	-0.019	-0.5006	No
120	CDC42EP2	4180 14771	14041	-0.022	-0.5123	No
121	KIF2C	15789	14133	-0.024	-0.5168	No
122	RND1	5868	14441	-0.029	-0.5329	No
123	PSCD2	17826	14566	-0.032	-0.5390	No
124	ARHGAP10	3808 18836	14850	-0.041	-0.5535	No
125	DMD	24295 2647	14851	-0.041	-0.5528	No
126	MYH7	21828 4709	15059	-0.050	-0.5631	No
127	RACGAP1	2240 22132	15145	-0.053	-0.5667	No
128	KIF13B	21982 21983	15239	-0.058	-0.5706	No
129	APC	4396 2022	15290	-0.061	-0.5722	No
130	ROCK1	5386	15375	-0.067	-0.5754	No
131	NF1	5165	15418	-0.071	-0.5764	No
132	GSN	2784	15449	-0.073	-0.5766	No
133	KIF1B	15671 2476 4950 15673	15536	-0.081	-0.5798	No
134	CENTD2	1758 18169 2284	15643	-0.090	-0.5838	No
135	DYNLL1	12135	15881	-0.117	-0.5944	No
136	LRPPRC	13031 22883	15937	-0.128	-0.5950	No
137	ARHGDIB	16950	16075	-0.157	-0.5995	No
138	MYO1E	7742	16157	-0.173	-0.6006	Yes
139	MID1IP1	24381	16182	-0.181	-0.5985	Yes
140	RHOT2	1533 10073	16201	-0.185	-0.5960	Yes
141	RASA1	10174	16249	-0.195	-0.5948	Yes
142	MYO9B	5142 18581	16339	-0.214	-0.5956	Yes
143	MYO6	19368	16356	-0.219	-0.5924	Yes
144	LRMP	17244	16509	-0.261	-0.5957	Yes
145	NCK2	9448	16599	-0.287	-0.5951	Yes
146	MAPRE1	4652	16819	-0.360	-0.6002	Yes
147	MYL6	9438 3408	16952	-0.412	-0.5996	Yes
148	TNNT2	14113	17013	-0.437	-0.5946	Yes
149	ARF6	21252	17016	-0.438	-0.5864	Yes
150	SSH2	6202	17036	-0.443	-0.5791	Yes
151	RAC1	16302	17052	-0.451	-0.5714	Yes
152	PRC1	12862 18203	17136	-0.482	-0.5668	Yes
153	FGD2	23309	17261	-0.528	-0.5636	Yes
154	ARPC4	12642	17266	-0.530	-0.5538	Yes
155	WASL	17203	17292	-0.543	-0.5449	Yes
156	FGD3	11399	17389	-0.590	-0.5390	Yes
157	STX5	23942	17470	-0.636	-0.5313	Yes
158	MAP3K11	11163	17499	-0.655	-0.5205	Yes
159	CENPJ	21809 23694	17754	-0.831	-0.5186	Yes
160	WIPF1	14560	17791	-0.863	-0.5042	Yes
161	ARHGAP4	9343	17817	-0.882	-0.4890	Yes
162	PDPK1	23097	18082	-1.189	-0.4808	Yes
163	SCIN	21079	18160	-1.285	-0.4608	Yes
164	WASF2	6326	18318	-1.668	-0.4378	Yes
165	SNAP29	22837	18334	-1.700	-0.4065	Yes
166	ELMO1	3275 8939 3202 3271 3254 3235 3164 3175 3274 3188 3293 3214 3218 3239	18347	-1.737	-0.3744	Yes
167	SMC1A	2572 24225 6279 10780	18370	-1.797	-0.3417	Yes
168	CNN2	19953 3391	18391	-1.835	-0.3082	Yes
169	LASP1	4986 4985 1248	18546	-2.918	-0.2615	Yes
170	ARPC5	12580 7487	18561	-3.137	-0.2031	Yes
171	NUSAP1	2956 4250	18603	-5.121	-0.1087	Yes
172	RAN	5356 9691	18611	-5.795	0.0003	Yes