DatasetSet_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls
#transDMpreB_versus_WTpreB
Phenotypephenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in classtransDMpreB
GeneSetCELLULAR_BIOSYNTHETIC_PROCESS
Enrichment Score (ES)0.6221774
Normalized Enrichment Score (NES)1.5377442
Nominal p-value0.0
FDR q-value0.117190845
FWER p-Value0.881
Table: GSEA Results Summary



Fig 1: Enrichment plot: CELLULAR_BIOSYNTHETIC_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RPL3812562 20606 747508.8610.0742Yes
2RPL29974194.7120.1133Yes
3PABPC410510 2418 2548174.1600.1478Yes
4CTPS2514 15772672.9400.1697Yes
5MIF9387732.8900.1937Yes
6IL1014145 1510 1553 229021482.2480.2085Yes
7RPL27A11181 6467 181301652.1980.2260Yes
8MRPL33116 193351712.1390.2437Yes
9KARS187382431.8510.2553Yes
10PRG3149712611.7960.2694Yes
11EIF2B3161182641.7870.2843Yes
12PPAT60812711.7640.2987Yes
13NACA9444 51472951.6680.3115Yes
14UMPS22606 17603371.5980.3226Yes
15EIF5A11345 20379 65903541.5740.3349Yes
16CHST7243723901.5260.3458Yes
17DARS10375 138464031.5050.3578Yes
18ABCF122996 10329 58974141.4960.3698Yes
19EIF557364251.4810.3816Yes
20HRSP129123 9122 4870 96384321.4640.3936Yes
21RARS204964391.4600.4055Yes
22PTGES37101 121024651.4160.4160Yes
23GUK1204324741.3950.4272Yes
24EIF1235634981.3530.4373Yes
25PAICS168205521.2620.4450Yes
26FARSB139096251.1670.4509Yes
27RPL47499 194116321.1620.4603Yes
28ETF1234676531.1330.4687Yes
29GMDS214966881.0910.4760Yes
30MRPL55208647461.0340.4815Yes
31RRBP18176 144117561.0240.4896Yes
32PET112L1824 15563 18198430.9370.4928Yes
33MRPL2397388770.9120.4986Yes
34HSD3B741588950.8970.5052Yes
35EIF2B116368 34589090.8850.5119Yes
36RPL14192679170.8810.5189Yes
37TUFM106089650.8370.5234Yes
38UPF19718 188559680.8360.5303Yes
39GCLM90199700.8320.5372Yes
40COPS54117 140029780.8230.5437Yes
41GMPS155789960.8100.5496Yes
42RPS2927910090.8000.5556Yes
43COX102040810670.7560.5588Yes
44SCYE1889711380.7110.5610Yes
45HPRT12655 24339 40811870.6810.5641Yes
46EIF2B51719 2282212060.6700.5687Yes
47EEF1A138 38 887912390.6540.5725Yes
48LTA4H19906 337412670.6340.5763Yes
49EIF4A3964713400.6020.5774Yes
50RPL219737 16624 539114580.5440.5756Yes
51RPL311426714690.5410.5796Yes
52RPL6974715090.5250.5819Yes
53RPS19539815650.5050.5831Yes
54EIF4B13279 797915740.5010.5869Yes
55RPL30974215760.5010.5910Yes
56MRPS72059515800.4990.5950Yes
57ACN91292016260.4820.5966Yes
58HSP90AB14880 9130 488116640.4650.5985Yes
59UROS17588 122717000.4540.6004Yes
60EIF4G31051717410.4410.6019Yes
61EIF2B41657417520.4370.6050Yes
62SOD1984617690.4310.6078Yes
63RPL7A1131217800.4270.6108Yes
64ADM1812518020.4130.6131Yes
65METAP11515418230.4040.6154Yes
66BCAT11042 443418460.3960.6175Yes
67WARS2085 2098419270.3670.6162Yes
68HS6ST11427419560.3580.6177Yes
69APOA28615 404420740.3210.6140Yes
70RPL23A1119320880.3160.6160Yes
71MAST2942321300.3030.6163Yes
72AP3D11969021700.2920.6166Yes
73DGAT21774821890.2840.6180Yes
74MRPL102068122000.2800.6198Yes
75TSTA32225322170.2760.6212Yes
76MRPS241226222550.2650.6214Yes
77MRPL5112361 730122820.2570.6222Yes
78SARS2523540.2390.6203No
79EIF4H1635224370.2170.6177No
80RPS3A975524420.2150.6193No
81PYCR12011125480.1860.6151No
82DPH14375 8580 858125790.1780.6149No
83PDSS11510625860.1760.6161No
84TLR72400425990.1730.6169No
85BRCA12021326060.1720.6180No
86RPL26973926690.1620.6160No
87SPR1709126950.1570.6159No
88COASY1295327120.1550.6164No
89MTIF21335427980.1390.6129No
90RPS17975329330.1170.6066No
91RPL31133030170.1050.6029No
92RPL241266430300.1030.6032No
93RPL82243730420.1010.6034No
94EBI32319330720.0970.6026No
95AARS10630 615130830.0960.6029No
96RPL391249631510.0880.6000No
97DHPS381532600.0770.5947No
98RPL5974633130.0730.5925No
99TGFB2574333820.0680.5894No
100RPL18A1335834020.0660.5889No
101RPL411261134590.0620.5864No
102RPS36549 1129534740.0610.5861No
103FOXP39804 542635490.0560.5826No
104SLC5A72293835510.0560.5830No
105TLR42329 10191 577035780.0550.5820No
106RPL131128436150.0530.5805No
107GAMT1969836950.0490.5766No
108GHSR1810 1562538500.0430.5686No
109PEX719808 330539050.0410.5660No
110PNPLA32240639100.0410.5661No
111IL4917439330.0400.5653No
112YARS1607139860.0380.5627No
113PAIP12155641650.0330.5533No
114AK5604241950.0320.5520No
115AKT1856842020.0320.5520No
116TSC1723542730.0300.5484No
117RPL28539243390.0290.5451No
118PTGS12726 5316 1502843830.0280.5430No
119CHST111992144020.0270.5422No
120HPGD486745980.0240.5318No
121CYP39A11538 2323247740.0220.5225No
122UCN21030848450.0210.5188No
123RPL3712502 7421 2252149260.0200.5146No
124MTRF13413 2194949800.0190.5119No
125SPN452 549351450.0170.5031No
126SFTPD2186751550.0170.5028No
127ALDH18A12368252420.0160.4982No
128RPL18450 539052600.0160.4974No
129COX15593154700.0140.4862No
130HSD11B2487255510.0140.4819No
131CD2814239 409255910.0130.4799No
132ADORA2A855756660.0130.4760No
133YBX22081858500.0120.4661No
134IL61689561310.0100.4510No
135TLR8930865020.0090.4309No
136AKR1D11748365710.0080.4272No
137EREG4679 1679766510.0080.4230No
138GCK2053567320.0080.4187No
139IL271763667660.0080.4170No
140PTGDS1465867950.0070.4155No
141NDST123430 488568490.0070.4127No
142TNFRSF82373 578468770.0070.4113No
143COQ31626271300.0060.3976No
144DEFB103A1866575370.0050.3755No
145BBOX15010 929076070.0050.3718No
146DCT4603 2172378620.0040.3580No
147RPS51839180300.0040.3489No
148PLCE11315683770.0030.3301No
149RPL221597986090.0020.3176No
150IL92144487170.0020.3117No
151GLA436287880.0020.3080No
152DAZL2294488520.0020.3045No
153GLMN16452 356289040.0010.3018No
154IL12B2091889110.0010.3015No
155UGDH1024990020.0010.2966No
156IL17F1399290800.0010.2924No
157GPR1432422492180.0010.2849No
158CYP27B18831 342692310.0010.2843No
159ALDH9A11406494020.0000.2750No
160CDO1873194120.0000.2745No
161EIF2AK4149099577-0.0000.2656No
162ABCA1158819836-0.0010.2515No
163GLCE135269847-0.0010.2510No
164CYP11A145809887-0.0010.2489No
165SAMD4A1321110236-0.0020.2300No
166TLR31888410303-0.0020.2264No
167PDZD31915310568-0.0030.2120No
168TLR919331 312710575-0.0030.2117No
169CPOX1740 878010639-0.0030.2083No
170GRM8480510700-0.0030.2051No
171BMP6865910915-0.0040.1934No
172NQO118754 383611018-0.0040.1879No
173CYP11B22457411168-0.0040.1798No
174ADK3302 3454 855511260-0.0050.1749No
175HSPB1487911515-0.0050.1611No
176PPOX13761 410411558-0.0050.1589No
177EIF2C11067211650-0.0060.1540No
178ELA211925 889311842-0.0060.1436No
179PAH1991111947-0.0070.1380No
180GHRL1183 1704012030-0.0070.1336No
181CHST9772712173-0.0080.1259No
182CHST81275412214-0.0080.1238No
183HBS1L20076 12127 711912284-0.0080.1201No
184DHRS96308 288712391-0.0090.1144No
185EEF2K1810112795-0.0110.0926No
186HSD3B11522712902-0.0110.0869No
187INHA1421412940-0.0110.0850No
188INHBB1385813234-0.0130.0691No
189TYR1776313346-0.0140.0632No
190GATM1445113445-0.0150.0580No
191CYP7B11537313472-0.0150.0567No
192PMM21670 1666 1707 22863 175613639-0.0170.0478No
193NR5A11459713788-0.0190.0399No
194PFKFB1955214068-0.0230.0249No
195FADS2712714081-0.0230.0244No
196BOLL796014218-0.0250.0172No
197HS3ST3B1705414422-0.0290.0064No
198ALAD1586614467-0.0300.0043No
199RPS6KB2719814583-0.033-0.0017No
200BACE21738 22687 169514594-0.033-0.0020No
201EIF4G21908 889214640-0.035-0.0041No
202HSP90AA14883 4882 913114678-0.036-0.0059No
203SLC25A10657214714-0.037-0.0075No
204MAT2B20494 143114780-0.039-0.0107No
205DMD24295 264714851-0.041-0.0141No
206EIF2B22120414944-0.045-0.0188No
207FECH1975 23419 196414998-0.047-0.0213No
208TNIP112192 20450 132015147-0.053-0.0289No
209EGFR1329 2094415177-0.055-0.0300No
210RPS101246415187-0.055-0.0300No
211RPS271218315287-0.061-0.0349No
212BCL3865415460-0.074-0.0437No
213AGPAT2266415510-0.079-0.0457No
214CHST121664215515-0.080-0.0452No
215RPL151235515606-0.087-0.0494No
216NDUFA13740015666-0.092-0.0518No
217GCLC1937415672-0.093-0.0513No
218FURIN953815674-0.093-0.0506No
219RPL351236015718-0.097-0.0521No
220DDX251918415726-0.097-0.0517No
221RPL19973615770-0.103-0.0532No
222NFE2L1945715839-0.111-0.0560No
223AGPAT12327515868-0.116-0.0565No
224ALAS22422915878-0.117-0.0560No
225RPL7974815898-0.119-0.0561No
226PTS1912615999-0.139-0.0603No
227PPARGC1A1653316024-0.143-0.0605No
228RPL111245016025-0.143-0.0593No
229PLOD11567916029-0.144-0.0582No
230MRPL522201916065-0.152-0.0588No
231EIF2AK1486916076-0.157-0.0581No
232ALAS11901316096-0.162-0.0577No
233TYMS5810 5809 3606 359816248-0.195-0.0643No
234RPS111131716274-0.200-0.0640No
235ADCY78552 44816369-0.222-0.0673No
236ATF422417 223916400-0.229-0.0670No
237FARS22166616410-0.232-0.0655No
238COQ71766416540-0.268-0.0703No
239MOCS22155816694-0.314-0.0760No
240FADS12393316826-0.363-0.0801No
241EXT12229716951-0.412-0.0834No
242DEGS1885016993-0.430-0.0821No
243ARPP-191937917164-0.493-0.0872No
244EIF2AK31742117301-0.547-0.0900No
245APBB11770517379-0.584-0.0893No
246TLR11019017408-0.600-0.0858No
247DDAH22326317410-0.601-0.0808No
248OAZ1949817484-0.645-0.0794No
249RPL3L2335417976-1.044-0.0974No
250PAIP21259318038-1.127-0.0913No
251BCL101539718079-1.187-0.0835No
252TSPO2204 2240818133-1.252-0.0759No
253IRF42167918386-1.823-0.0743No
254EIF4A24660 1679 164518400-1.854-0.0595No
255CHST31976018426-1.960-0.0445No
256LTB2325918432-1.982-0.0281No
257GCH19008 476218472-2.236-0.0115No
258TLR6215 1652818484-2.3040.0072No
Table: GSEA details [plain text format]



Fig 2: CELLULAR_BIOSYNTHETIC_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CELLULAR_BIOSYNTHETIC_PROCESS: Random ES distribution   
Gene set null distribution of ES for CELLULAR_BIOSYNTHETIC_PROCESS