Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	transDMpreB
GeneSet	V$E2F_02
Enrichment Score (ES)	0.56863976
Normalized Enrichment Score (NES)	1.3457674
Nominal p-value	0.016759777
FDR q-value	0.5571349
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CLSPN	16079 11256 6530	94	2.627	0.0349	Yes
2	EIF4A1	8889 23719	122	2.399	0.0699	Yes
3	MCM7	9372 3568	178	2.099	0.0989	Yes
4	NCL	5153 13899	191	2.049	0.1294	Yes
5	RRM2	5401 5400	222	1.924	0.1570	Yes
6	DNMT1	19217	226	1.914	0.1860	Yes
7	NOLC1	7704	300	1.658	0.2073	Yes
8	FANCD2	17326 464	435	1.463	0.2223	Yes
9	SYNCRIP	3078 3035 3107	496	1.355	0.2396	Yes
10	SNRPD1	23622	497	1.354	0.2602	Yes
11	CDCA7	12437	536	1.297	0.2779	Yes
12	NASP	2383 2387 6955	545	1.283	0.2970	Yes
13	UNG	10257 16744	556	1.255	0.3155	Yes
14	MSH2	23138	676	1.101	0.3258	Yes
15	FKBP5	23051	693	1.087	0.3415	Yes
16	GSPT1	9046	730	1.047	0.3555	Yes
17	MCM3	13991	755	1.026	0.3698	Yes
18	CDC25A	8721	763	1.018	0.3849	Yes
19	RQCD1	12205	782	0.999	0.3991	Yes
20	MCM2	17074	826	0.958	0.4114	Yes
21	ACBD6	14089	1019	0.792	0.4130	Yes
22	PHF5A	22194	1022	0.790	0.4249	Yes
23	HMGA1	23323	1108	0.730	0.4314	Yes
24	POLD3	17742	1142	0.708	0.4404	Yes
25	GMNN	21513	1145	0.706	0.4511	Yes
26	PRPS1	24233	1205	0.671	0.4581	Yes
27	PCNA	9535	1278	0.629	0.4638	Yes
28	MAP3K7	16255	1281	0.628	0.4732	Yes
29	PRPS2	24003	1351	0.594	0.4785	Yes
30	AP1S1	3500 3453 16335	1382	0.578	0.4857	Yes
31	HIRA	4852 9090	1386	0.577	0.4943	Yes
32	ACO2	8527	1389	0.575	0.5029	Yes
33	MRPL40	22641	1397	0.571	0.5112	Yes
34	NUP62	9497	1427	0.558	0.5182	Yes
35	SMAD6	19083	1493	0.533	0.5227	Yes
36	ILF3	3110 3030 9176	1627	0.481	0.5229	Yes
37	EED	17759	1632	0.478	0.5299	Yes
38	E2F3	21500 8874	1639	0.476	0.5368	Yes
39	SUMO1	5826 3943 10247	1708	0.452	0.5400	Yes
40	CDC5L	7746 7745 7744	1766	0.431	0.5435	Yes
41	SUV39H1	24194	1774	0.430	0.5497	Yes
42	BRPF1	17332	1872	0.385	0.5503	Yes
43	HTF9C	4886 1678	1908	0.374	0.5541	Yes
44	TRIM39	22994	2080	0.319	0.5497	Yes
45	STMN1	9261	2099	0.313	0.5534	Yes
46	SFRS1	8492	2114	0.308	0.5574	Yes
47	ZCCHC8	3570 7696	2176	0.290	0.5585	Yes
48	E2F1	14384	2208	0.278	0.5610	Yes
49	PHC1	17013	2312	0.251	0.5593	Yes
50	E2F7	19884	2314	0.251	0.5630	Yes
51	USP37	13923	2377	0.233	0.5632	Yes
52	BRMS1L	21268	2399	0.227	0.5655	Yes
53	FHOD1	18772	2406	0.226	0.5686	Yes
54	FANCC	4712	2628	0.168	0.5592	No
55	POLR2A	5394	2747	0.149	0.5551	No
56	SFRS7	22889	2839	0.130	0.5522	No
57	USP52	3397 19841	2840	0.130	0.5541	No
58	NR6A1	14596	2857	0.128	0.5552	No
59	PTMA	9657	2964	0.111	0.5512	No
60	PRKDC	9617 22847	3163	0.086	0.5418	No
61	ASXL2	7957	3226	0.080	0.5396	No
62	MAPT	9420 1347	3342	0.071	0.5345	No
63	GATA1	24196	3343	0.071	0.5355	No
64	MAZ	1327 17623	3923	0.040	0.5048	No
65	SEMA6A	23439 9802	3967	0.039	0.5031	No
66	CDC6	6221 6220	4092	0.035	0.4969	No
67	PAQR4	23105	4294	0.030	0.4864	No
68	FBXO5	19830	4790	0.021	0.4600	No
69	KCNA6	664 16990 665 4938	5017	0.019	0.4480	No
70	PHF15	20467 8050	5286	0.016	0.4337	No
71	FANCG	15904	5739	0.012	0.4094	No
72	RANBP1	9692 5357	5795	0.012	0.4066	No
73	YBX2	20818	5850	0.012	0.4039	No
74	ARID4A	2080 6215	5859	0.012	0.4036	No
75	GLRA3	18617	5871	0.012	0.4032	No
76	HNRPUL1	6118 17923 1608 10577 1345	5900	0.011	0.4019	No
77	ATAD2	2268 2256	6043	0.011	0.3943	No
78	POU4F1	21727	6064	0.011	0.3934	No
79	IPO7	6130	6752	0.008	0.3563	No
80	STAG1	5520 9905 2987	7004	0.007	0.3428	No
81	KCNS2	4949 2232	7008	0.007	0.3428	No
82	GRIA4	19249	7080	0.006	0.3390	No
83	SLCO3A1	17796 4237 8430	7124	0.006	0.3368	No
84	MYH10	8077	7678	0.005	0.3069	No
85	STK35	14851	7679	0.005	0.3070	No
86	POLE2	21053	7815	0.004	0.2997	No
87	NELL2	12006 7020 22151	7997	0.004	0.2900	No
88	ZBTB4	13267	8020	0.004	0.2888	No
89	SFRS10	9818 1722 5441	8050	0.004	0.2873	No
90	PCSK1	21600	8126	0.003	0.2833	No
91	HNRPA2B1	1187 7001 7000 1040	8229	0.003	0.2778	No
92	GABRB3	4747	8279	0.003	0.2752	No
93	HOXC10	22342	8431	0.003	0.2671	No
94	PODN	15811	8681	0.002	0.2536	No
95	TYRO3	5811	8858	0.002	0.2441	No
96	ADAMTS2	5706 20899 1356	8974	0.001	0.2379	No
97	HNRPD	8645	9217	0.001	0.2248	No
98	DNAJC9	21912	9225	0.001	0.2245	No
99	FMO4	13786	9537	-0.000	0.2076	No
100	NRK	6559	9713	-0.001	0.1981	No
101	PAX6	5223	10181	-0.002	0.1729	No
102	PRPF4B	3208 5295	10398	-0.002	0.1612	No
103	RPS6KA5	2076 21005	10489	-0.002	0.1564	No
104	TOPBP1	10659	10535	-0.003	0.1540	No
105	EPHB1	19024	10967	-0.004	0.1307	No
106	SP3	5483	11020	-0.004	0.1279	No
107	RET	17028	11047	-0.004	0.1266	No
108	CBX3	8705 4484	11398	-0.005	0.1077	No
109	CASP8AP2	16253	11426	-0.005	0.1063	No
110	HCN3	4843 1763	11506	-0.005	0.1021	No
111	PLAGL1	10372 3414	11760	-0.006	0.0885	No
112	EZH2	1092 17163	12637	-0.010	0.0412	No
113	TBX6	1993 18075	12820	-0.011	0.0315	No
114	ARHGAP6	24207	12924	-0.011	0.0261	No
115	HS6ST3	21933	13035	-0.012	0.0203	No
116	PEG3	5240	13221	-0.013	0.0105	No
117	SYNGR4	17825	13761	-0.018	-0.0184	No
118	HNRPR	13196 7909 2500	13777	-0.019	-0.0189	No
119	GPRC5B	17662	14171	-0.024	-0.0398	No
120	RBL1	14373	14215	-0.025	-0.0418	No
121	TLE3	5767 19416	14511	-0.031	-0.0573	No
122	MCM8	14834	14573	-0.033	-0.0601	No
123	DMD	24295 2647	14851	-0.041	-0.0745	No
124	MYC	22465 9435	14956	-0.045	-0.0794	No
125	MAPK6	19062	15200	-0.056	-0.0917	No
126	EFNA5	4655 8884	15286	-0.061	-0.0954	No
127	AP4M1	3499 16656	15591	-0.085	-0.1106	No
128	ATF5	17843	15646	-0.090	-0.1121	No
129	MCM6	4000 13845 4119	15695	-0.095	-0.1133	No
130	RPS20	7438	15729	-0.098	-0.1136	No
131	MSH5	23010 1599	15846	-0.112	-0.1182	No
132	CORT	15669 2539	15867	-0.115	-0.1175	No
133	H2AFZ	6957	16059	-0.151	-0.1255	No
134	TMPO	5778	16117	-0.167	-0.1261	No
135	UGCGL1	6721	16136	-0.170	-0.1245	No
136	STAG2	5521	16171	-0.178	-0.1236	No
137	HIST1H2AH	11414	16657	-0.302	-0.1453	No
138	ING3	17514 1019	16687	-0.312	-0.1421	No
139	POLD1	17847	16839	-0.368	-0.1447	No
140	SLC9A7	24177	16886	-0.389	-0.1413	No
141	ALDH6A1	21025	16900	-0.394	-0.1360	No
142	AK2	8563 2479 16073	16960	-0.419	-0.1328	No
143	CCNT1	22140 11607	17006	-0.435	-0.1286	No
144	PIM1	23308	17073	-0.461	-0.1252	No
145	POLE4	12441	17279	-0.536	-0.1281	No
146	MCM4	22655 1708	17543	-0.687	-0.1319	No
147	SOAT1	13797	17857	-0.911	-0.1350	No
148	H2AFV	1273 20531	17960	-1.024	-0.1250	No
149	DCK	16808	17984	-1.054	-0.1102	No
150	PPM1D	20721	18030	-1.116	-0.0957	No
151	MXD3	21455	18151	-1.270	-0.0828	No
152	HIST1H2BK	11423	18232	-1.432	-0.0654	No
153	HIST1H4A	11590	18396	-1.845	-0.0461	No
154	IL4I1	8971	18580	-3.813	0.0020	No