DatasetSet_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls
#transDMpreB_versus_WTpreB
Phenotypephenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in classtransDMpreB
GeneSetV$E2F1_Q6_01
Enrichment Score (ES)0.6029071
Normalized Enrichment Score (NES)1.425545
Nominal p-value0.006980803
FDR q-value0.51271576
FWER p-Value0.996
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$E2F1_Q6_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CLSPN16079 11256 6530942.6270.0414Yes
2MCM79372 35681782.0990.0740Yes
3PPRC1238081792.0970.1111Yes
4NCL5153 138991912.0490.1467Yes
5DNMT1192172261.9140.1788Yes
6NOLC177043001.6580.2041Yes
7SYNCRIP3078 3035 31074961.3550.2175Yes
8CDCA7124375361.2970.2384Yes
9NASP2383 2387 69555451.2830.2606Yes
10UNG10257 167445561.2550.2823Yes
11MSH2231386761.1010.2953Yes
12FKBP5230516931.0870.3137Yes
13GSPT190467301.0470.3302Yes
14MCM3139917551.0260.3471Yes
15CDC25A87217631.0180.3647Yes
16POLA2239887811.0010.3815Yes
17RQCD1122057820.9990.3992Yes
18MCM2170748260.9580.4138Yes
19ACBD61408910190.7920.4174Yes
20PHF5A2219410220.7900.4313Yes
21ATP5G21261010790.7510.4415Yes
22POLD31774211420.7080.4507Yes
23GMNN2151311450.7060.4630Yes
24PRPS12423312050.6710.4717Yes
25PCNA953512780.6290.4790Yes
26AP1S13500 3453 1633513820.5780.4836Yes
27HIRA4852 909013860.5770.4936Yes
28ACO2852713890.5750.5037Yes
29MRPL402264113970.5710.5134Yes
30INSM11481514820.5370.5184Yes
31RPS19539815650.5050.5229Yes
32ILF33110 3030 917616270.4810.5281Yes
33EED1775916320.4780.5363Yes
34E2F321500 887416390.4760.5444Yes
35NUMA11816716930.4550.5496Yes
36SUMO15826 3943 1024717080.4520.5568Yes
37CDC5L7746 7745 774417660.4310.5614Yes
38SUV39H12419417740.4300.5686Yes
39PPP1R81573019040.3750.5682Yes
40HTF9C4886 167819080.3740.5747Yes
41SIN3A544220580.3250.5723Yes
42TRIM392299420800.3190.5769Yes
43AMD1858320950.3140.5816Yes
44STMN1926120990.3130.5870Yes
45SFRS1849221140.3080.5917Yes
46E2F11438422080.2780.5916Yes
47DNAJC112486 606823620.2370.5875Yes
48USP371392323770.2330.5909Yes
49BRMS1L2126823990.2270.5937Yes
50FHOD11877224060.2260.5974Yes
51SFRS29807 2013624320.2180.5999Yes
52SLC25A12264524470.2120.6029Yes
53FANCC471226280.1680.5961No
54USP523397 1984128400.1300.5870No
55PTMA965729640.1110.5823No
56PRKDC9617 2284731630.0860.5731No
57ASXL2795732260.0800.5712No
58GATA12419633430.0710.5661No
59USP219480 3052 304335170.0590.5578No
60WEE11812735280.0570.5583No
61DDB22721 2878 14525 266138700.0420.5405No
62MAZ1327 1762339230.0400.5384No
63PAQR42310542940.0300.5189No
64TNFRSF19L11498 6727 672643230.0290.5179No
65NCOA62876 1438243880.0280.5149No
66HMGA24857 9098 3341 344444890.0260.5100No
67CNOT36112 10565 611344960.0260.5101No
68HR3622 911946120.0240.5043No
69FAF12508 16137 895147410.0220.4978No
70FBXO51983047900.0210.4955No
71RAD512897 1490350530.0180.4817No
72RPL18450 539052600.0160.4708No
73PHF1520467 805052860.0160.4697No
74REPS22401855800.0130.4541No
75SYT613437 7042 1204056230.0130.4520No
76FANCG1590457390.0120.4460No
77RANBP19692 535757950.0120.4433No
78YBX22081858500.0120.4405No
79HNRPUL16118 17923 1608 10577 134559000.0110.4381No
80ATAD22268 225660430.0110.4306No
81CDC45L22642 175265720.0080.4021No
82IPO7613067520.0080.3926No
83STAG15520 9905 298770040.0070.3791No
84KCNS24949 223270080.0070.3790No
85MYH10807776780.0050.3429No
86STK351485176790.0050.3430No
87POLE22105378150.0040.3357No
88PCSK12160081260.0030.3190No
89NPAT19452 635682670.0030.3114No
90HOXC102234284310.0030.3027No
91PODN1581186810.0020.2892No
92PCDH105227 9534 189386920.0020.2887No
93TYRO3581188580.0020.2798No
94ADAMTS25706 20899 135689740.0010.2736No
95ERBB2IP3232 1223490660.0010.2687No
96ATM2976 1911591620.0010.2635No
97HNRPD864592170.0010.2606No
98DNAJC92191292250.0010.2603No
99RB1CC14486 1429994270.0000.2494No
100FZD11692394290.0000.2493No
101BMP2148339956-0.0010.2208No
102IRX3187939964-0.0010.2205No
103PAX6522310181-0.0020.2088No
104MTSS15585 2228510467-0.0020.1934No
105DHH462910519-0.0030.1907No
106TOPBP11065910535-0.0030.1899No
107CASP2869211132-0.0040.1577No
108SPHK21217 1806 1215511207-0.0040.1538No
109CASP8AP21625311426-0.0050.1421No
110CBX522108 448511480-0.0050.1393No
111HCN34843 176311506-0.0050.1380No
112GNG42170611517-0.0050.1376No
113UXT5837 1026712291-0.0080.0958No
114EZH21092 1716312637-0.0100.0773No
115TNF2300412661-0.0100.0763No
116TBX61993 1807512820-0.0110.0679No
117MGAT22125612849-0.0110.0666No
118ARHGAP62420712924-0.0110.0628No
119SYNGR41782513761-0.0180.0178No
120HNRPR13196 7909 250013777-0.0190.0173No
121GPRC5B1766214171-0.024-0.0035No
122RBL11437314215-0.025-0.0054No
123MCM81483414573-0.033-0.0242No
124KLF5445614590-0.033-0.0245No
125ACTN323967 854014766-0.038-0.0333No
126ERF4680 891414901-0.043-0.0398No
127POU2F15275 3989 4065 401014921-0.044-0.0400No
128MYC22465 943514956-0.045-0.0411No
129SP1985215014-0.048-0.0433No
130SMARCA12416515209-0.057-0.0528No
131EFNA54655 888415286-0.061-0.0559No
132LRP1928415413-0.071-0.0615No
133JPH11399415540-0.081-0.0669No
134AP4M13499 1665615591-0.085-0.0681No
135MCM64000 13845 411915695-0.095-0.0720No
136ORC1L327 1614415713-0.097-0.0712No
137ENPP11980415742-0.101-0.0709No
138PHF131565915744-0.101-0.0692No
139TMPO577816117-0.167-0.0864No
140STAG2552116171-0.178-0.0861No
141HMGN2909516174-0.179-0.0830No
142UFD1L2282516340-0.214-0.0882No
143PIK3CD956316512-0.261-0.0928No
144CHD48418 17281 422516588-0.283-0.0919No
145CTCF1849016654-0.300-0.0901No
146HIST1H2AH1141416657-0.302-0.0849No
147MAP4K11831316669-0.306-0.0801No
148GADD45B1993516715-0.321-0.0769No
149ATE1388 1760216725-0.325-0.0716No
150SLC9A72417716886-0.389-0.0734No
151AK28563 2479 1607316960-0.419-0.0699No
152CCNT122140 1160717006-0.435-0.0647No
153MCM422655 170817543-0.687-0.0816No
154RAB11B967617688-0.781-0.0756No
155PPM1D2072118030-1.116-0.0743No
156MXD32145518151-1.270-0.0583No
157HIST1H2BK1142318232-1.432-0.0373No
158FLI1472918239-1.444-0.0121No
159HNRPA19103 486018392-1.8370.0121No
Table: GSEA details [plain text format]



Fig 2: V$E2F1_Q6_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$E2F1_Q6_01: Random ES distribution   
Gene set null distribution of ES for V$E2F1_Q6_01