Details for gene set HSA05211_RENAL_CELL

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls #transDMpreB_versus_WTpreB
Phenotype	phenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	HSA05211_RENAL_CELL_CARCINOMA
Enrichment Score (ES)	-0.6962382
Normalized Enrichment Score (NES)	-1.4841192
Nominal p-value	0.008830022
FDR q-value	0.30564806
FWER p-Value	0.957

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	VEGFB	23800	785	0.996	0.0000	No
2	PIK3CB	19030	882	0.909	0.0335	No
3	PIK3R3	5248	1045	0.772	0.0576	No
4	VEGFA	22969	2056	0.325	0.0170	No
5	EGLN1	8504 18707 4298	2266	0.262	0.0169	No
6	MAP2K1	19082	2640	0.166	0.0038	No
7	TCEB2	12563 23102 7476	2914	0.120	-0.0058	No
8	RBX1	12130 7123	3227	0.080	-0.0192	No
9	MAP2K2	19933	3325	0.072	-0.0214	No
10	TGFB2	5743	3382	0.068	-0.0215	No
11	ETS1	10715 6230 3135	3448	0.063	-0.0223	No
12	TCEB1	13995	3748	0.047	-0.0365	No
13	PAK4	17909	3804	0.045	-0.0375	No
14	RAPGEF1	4218 2860	3945	0.040	-0.0434	No
15	AKT1	8568	4202	0.032	-0.0558	No
16	PIK3R2	18850	4225	0.031	-0.0557	No
17	FIGF	24212	4264	0.031	-0.0564	No
18	PAK1	9527	4349	0.029	-0.0597	No
19	PGF	21020	4681	0.023	-0.0766	No
20	HRAS	4868	4722	0.022	-0.0778	No
21	PIK3R5	11507	6232	0.010	-0.1587	No
22	HIF1A	4850	7024	0.007	-0.2011	No
23	RAP1A	8467	7144	0.006	-0.2072	No
24	CDC42	4503 8722 4504 2465	7364	0.005	-0.2188	No
25	PAK3	9528	7456	0.005	-0.2235	No
26	PDGFB	22199 2311	8288	0.003	-0.2681	No
27	AKT2	4365 4366	8328	0.003	-0.2701	No
28	EPAS1	23144	9522	-0.000	-0.3344	No
29	PAK7	14417	9892	-0.001	-0.3542	No
30	ARNT2	17769	10142	-0.002	-0.3676	No
31	NRAS	5191	10314	-0.002	-0.3767	No
32	HGF	16916	10749	-0.003	-0.4000	No
33	SOS1	5476	10751	-0.003	-0.3999	No
34	PIK3R1	3170	11690	-0.006	-0.4502	No
35	PTPN11	5326 16391 9660	12084	-0.007	-0.4711	No
36	TGFA	17381	12677	-0.010	-0.5025	No
37	MET	17520	13603	-0.017	-0.5517	No
38	CRK	4559 1249	13772	-0.019	-0.5600	No
39	PIK3CA	9562	13925	-0.021	-0.5673	No
40	CUL2	23630	14065	-0.023	-0.5738	No
41	ARAF	24367	14795	-0.039	-0.6114	No
42	TGFB3	10161	15910	-0.122	-0.6663	No
43	ARNT	4413 1857	16467	-0.246	-0.6858	Yes
44	RAF1	17035	16474	-0.248	-0.6756	Yes
45	PIK3CD	9563	16512	-0.261	-0.6665	Yes
46	PAK2	10310 5875	16516	-0.263	-0.6555	Yes
47	VEGFC	10286	16726	-0.325	-0.6529	Yes
48	SOS2	21049	16783	-0.343	-0.6413	Yes
49	GRB2	20149	16888	-0.389	-0.6304	Yes
50	MAPK3	6458 11170	17011	-0.437	-0.6184	Yes
51	RAC1	16302	17052	-0.451	-0.6014	Yes
52	AKT3	13739 982	17220	-0.514	-0.5885	Yes
53	SLC2A1	16107	17251	-0.524	-0.5679	Yes
54	CREBBP	22682 8783	17641	-0.746	-0.5571	Yes
55	JUN	15832	17701	-0.791	-0.5267	Yes
56	CRKL	4560	17704	-0.794	-0.4930	Yes
57	RAP1B	10083	17748	-0.823	-0.4604	Yes
58	EGLN3	8505	17831	-0.891	-0.4269	Yes
59	GAB1	18828	18157	-1.275	-0.3902	Yes
60	KRAS	9247	18298	-1.598	-0.3299	Yes
61	TGFB1	18332	18387	-1.827	-0.2569	Yes
62	PIK3CG	6635	18517	-2.540	-0.1559	Yes
63	MAPK1	1642 11167	18579	-3.793	0.0020	Yes