Details for gene set V$CP2

Table: GSEA Results Summary

Dataset	Set_04_transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB.phenotype_transDMpreB_versus_DMpreB.cls #transDMpreB_versus_DMpreB_repos
Phenotype	phenotype_transDMpreB_versus_DMpreB.cls#transDMpreB_versus_DMpreB_repos
Upregulated in class	transDMpreB
GeneSet	V$CP2_01
Enrichment Score (ES)	0.6366802
Normalized Enrichment Score (NES)	1.5677769
Nominal p-value	0.0
FDR q-value	0.3577199
FWER p-Value	0.749

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP2A3	20795 1314	0	6.225	0.2815	Yes
2	BZRAP1	9882	41	1.594	0.3514	Yes
3	DMTF1	887 3662 16928 3530	46	1.574	0.4223	Yes
4	BRE	3640 4226 16879	209	0.780	0.4488	Yes
5	HSD3B7	4158	279	0.666	0.4752	Yes
6	GNAS	9025 2963 2752	376	0.559	0.4952	Yes
7	GLG1	5421	385	0.554	0.5199	Yes
8	DOCK9	8369	401	0.537	0.5433	Yes
9	CEBPB	8733	751	0.341	0.5398	Yes
10	STX1A	16679	841	0.310	0.5490	Yes
11	UBE4B	2433 15672	894	0.294	0.5595	Yes
12	PPP1R12A	3354 19886	936	0.281	0.5700	Yes
13	RHOG	17727	938	0.280	0.5826	Yes
14	SATB1	5408	961	0.272	0.5937	Yes
15	RASGRP2	9693	1028	0.254	0.6016	Yes
16	VAMP2	20826	1082	0.237	0.6094	Yes
17	DCTN1	1100 17392	1228	0.206	0.6108	Yes
18	EPC1	2039 8907 2033	1241	0.204	0.6194	Yes
19	MAPK3	6458 11170	1268	0.198	0.6269	Yes
20	ASB2	20996	1409	0.173	0.6272	Yes
21	NLGN2	10117	1424	0.171	0.6341	Yes
22	SEMA4A	15289	1509	0.157	0.6367	Yes
23	EED	17759	1850	0.111	0.6233	No
24	DBP	18242	2274	0.069	0.6035	No
25	ETV3	11294	2322	0.066	0.6039	No
26	CRMP1	16860	2353	0.065	0.6052	No
27	GPD1	22361	2391	0.063	0.6060	No
28	PDE2A	18170	2528	0.055	0.6011	No
29	SLC23A2	14421	2681	0.047	0.5950	No
30	CDH2	1963 8727 8726 4508	2780	0.044	0.5917	No
31	RNF111	13555 8218 13556	2802	0.043	0.5925	No
32	RBM6	9707 3095 3063 2995	3019	0.036	0.5824	No
33	TNKS1BP1	14970	3189	0.032	0.5747	No
34	GATA1	24196	3273	0.030	0.5715	No
35	CDK8	6455 6456 3585 3542	3308	0.029	0.5710	No
36	VAPA	22908	3345	0.028	0.5703	No
37	HOXB9	20689	3366	0.028	0.5704	No
38	SALL1	18796 12207	3456	0.026	0.5668	No
39	SPOCK2	13585	3657	0.023	0.5569	No
40	PHF16	11795 6901	3715	0.022	0.5548	No
41	EFEMP2	23781	3725	0.021	0.5553	No
42	PMP22	9594 1312	3741	0.021	0.5555	No
43	HIPK2	17180	3832	0.020	0.5515	No
44	ARF3	22137	4073	0.017	0.5393	No
45	FOXA2	14405 2889	4181	0.016	0.5342	No
46	CITED1	24091	4212	0.016	0.5333	No
47	TIMELESS	10177	4231	0.016	0.5330	No
48	RHOQ	23142	4237	0.015	0.5334	No
49	RTN2	9764	4290	0.015	0.5313	No
50	MDFI	22950	4360	0.014	0.5282	No
51	FGD4	10306 5870 1717 1669 1700	4433	0.014	0.5249	No
52	BCOR	12934 2561	4585	0.013	0.5173	No
53	RPL41	12611	4883	0.011	0.5017	No
54	CREB3L2	17182	4934	0.011	0.4995	No
55	HR	3622 9119	5128	0.010	0.4894	No
56	GRM7	17338	5514	0.008	0.4689	No
57	RORC	9732	5600	0.008	0.4647	No
58	SOD3	16848	5706	0.007	0.4593	No
59	SPATS2	13044	5884	0.007	0.4500	No
60	ALOX12	20372	5900	0.007	0.4495	No
61	TNXB	1557 8174 878 8175	5971	0.006	0.4460	No
62	BTBD14B	7344 7343	6123	0.006	0.4380	No
63	EHF	4657	6135	0.006	0.4377	No
64	DLL4	7040	6155	0.006	0.4370	No
65	ATF3	13720	6232	0.006	0.4331	No
66	TJP2	5761 3699	6336	0.005	0.4277	No
67	IL11	17981	6556	0.005	0.4161	No
68	RHOA	8624 4409 4410	6567	0.005	0.4157	No
69	SYT6	13437 7042 12040	6621	0.005	0.4131	No
70	SOX10	22211	6685	0.004	0.4099	No
71	BMF	5074	6826	0.004	0.4024	No
72	CLSTN2	19033	7257	0.003	0.3793	No
73	CALD1	4273 8463	7286	0.003	0.3779	No
74	CAV3	17336	7287	0.003	0.3780	No
75	LTBP3	5008 23785 9288	7352	0.003	0.3746	No
76	LRCH4	10544 6090	7362	0.003	0.3743	No
77	DAB2IP	12808 2692	7511	0.002	0.3664	No
78	USP1	10497 10498 6051	7548	0.002	0.3645	No
79	TGFB1I1	5742 10159	7673	0.002	0.3579	No
80	SUMO2	1293 9319	7838	0.002	0.3491	No
81	COL1A1	8771	7861	0.002	0.3479	No
82	TUFT1	1847 15253	8001	0.001	0.3405	No
83	ESM1	21560	8099	0.001	0.3352	No
84	CSF2	20454	8345	0.001	0.3220	No
85	RKHD3	18199	8478	0.000	0.3149	No
86	LY6H	6244 22256 10732	8586	0.000	0.3091	No
87	HIF3A	11989 3784 2303	8606	0.000	0.3080	No
88	KCTD15	17864	9012	-0.001	0.2861	No
89	RTN1	4177 2099	9134	-0.001	0.2796	No
90	COX8C	21175	9198	-0.001	0.2762	No
91	HDAC9	21084 2131	9290	-0.001	0.2713	No
92	FBXO24	12918 3649	9423	-0.002	0.2643	No
93	SLITRK5	21939	9587	-0.002	0.2555	No
94	FOXN1	20337	10052	-0.003	0.2305	No
95	ZIC2	21927	10130	-0.003	0.2264	No
96	PAX6	5223	10163	-0.003	0.2249	No
97	D4ST1	14907	10206	-0.003	0.2227	No
98	TCF7L2	10048 5646	10213	-0.003	0.2226	No
99	NOPE	19407	10414	-0.004	0.2119	No
100	LIN28	15723	10416	-0.004	0.2120	No
101	B4GALT2	11990	10453	-0.004	0.2103	No
102	DDR1	1625 23000	10510	-0.004	0.2074	No
103	CALM3	8682	10582	-0.004	0.2038	No
104	COL1A2	8772	10779	-0.005	0.1933	No
105	PRELP	13833	10987	-0.005	0.1824	No
106	NNAT	2764 5180	10991	-0.005	0.1824	No
107	GUCA2B	15773	11071	-0.006	0.1784	No
108	CNN1	8759	11209	-0.006	0.1713	No
109	SLC41A1	8269	11260	-0.006	0.1688	No
110	LIM2	18282	11353	-0.006	0.1641	No
111	NGFB	15476	11384	-0.006	0.1628	No
112	PSMA5	6464	11691	-0.007	0.1465	No
113	RGMA	18213	11888	-0.008	0.1363	No
114	DHH	4629	11950	-0.008	0.1333	No
115	HEBP2	19812	11977	-0.008	0.1323	No
116	CDK5R2	14220	11986	-0.009	0.1323	No
117	VCP	11254	12000	-0.009	0.1319	No
118	EGFL6	24006	12051	-0.009	0.1296	No
119	KIF1C	4951	12162	-0.009	0.1241	No
120	IGFBP6	9161	12243	-0.010	0.1202	No
121	HOXC5	22340	12284	-0.010	0.1185	No
122	ODC1	9500	12373	-0.010	0.1141	No
123	GREM1	14485	12374	-0.010	0.1146	No
124	ELAVL2	15839	12384	-0.010	0.1146	No
125	DHRS3	15997	12392	-0.010	0.1147	No
126	DSG3	8866	12496	-0.011	0.1096	No
127	GPC3	24151	12569	-0.011	0.1062	No
128	IRS4	9183 4926	12643	-0.012	0.1027	No
129	ATP6V1E2	22880	12759	-0.012	0.0971	No
130	MAP1A	5124	12820	-0.013	0.0944	No
131	GATA3	9004	12840	-0.013	0.0939	No
132	BAP1	22057	13161	-0.015	0.0772	No
133	ITGB1BP2	24275	13356	-0.016	0.0674	No
134	STAG2	5521	13520	-0.018	0.0594	No
135	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	13549	-0.018	0.0587	No
136	WNT3	20635	13575	-0.018	0.0582	No
137	VKORC1L1	102 7625	13600	-0.018	0.0577	No
138	SLC8A3	2065 4293	13601	-0.018	0.0585	No
139	CRTAC1	23673	13883	-0.021	0.0442	No
140	ACBD5	15105 2751	13913	-0.022	0.0436	No
141	DAB1	4594 8834	14112	-0.024	0.0340	No
142	ETV5	22630	14115	-0.024	0.0350	No
143	JPH2	14364 7210	14127	-0.024	0.0355	No
144	SMOX	10455 2940 2737 2952	14261	-0.026	0.0294	No
145	RGS3	2434 2474 6937 11935 2374 2332 2445 2390	14351	-0.027	0.0258	No
146	KIF5A	9222	14389	-0.028	0.0251	No
147	COL11A2	23286	14435	-0.029	0.0240	No
148	KCNN2	8933 1949	14570	-0.031	0.0181	No
149	ANXA8	22046	14765	-0.035	0.0092	No
150	NCDN	15756 2487 6471	14856	-0.038	0.0060	No
151	HOXC8	4865	14911	-0.039	0.0049	No
152	NOL4	2028 11432	14919	-0.039	0.0063	No
153	TENC1	22349 9927	14944	-0.040	0.0068	No
154	DDIT4	19762	14950	-0.040	0.0083	No
155	SOCS1	4522	14964	-0.040	0.0094	No
156	ICAM4	19544	15053	-0.042	0.0065	No
157	PRDM13	15933	15162	-0.045	0.0027	No
158	SOX12	5478	15278	-0.049	-0.0013	No
159	SORT1	15452 5475 9847	15411	-0.053	-0.0061	No
160	MYBPC3	9434	15420	-0.053	-0.0041	No
161	ABHD4	22021	15511	-0.057	-0.0064	No
162	LAMB2	9265	15724	-0.066	-0.0149	No
163	CABP1	16412	15725	-0.066	-0.0119	No
164	SFRS7	22889	16140	-0.088	-0.0304	No
165	FKBP2	8972	16221	-0.093	-0.0305	No
166	PTOV1	13522	16345	-0.101	-0.0326	No
167	ARF6	21252	16656	-0.127	-0.0436	No
168	PAK2	10310 5875	16761	-0.137	-0.0431	No
169	RBKS	16568	17144	-0.180	-0.0557	No
170	PANK2	14838	17269	-0.194	-0.0537	No
171	PHF7	21890	17559	-0.232	-0.0588	No
172	NDUFS4	9452 5157 3173	17574	-0.235	-0.0490	No
173	MAPKAP1	15030 5993	17841	-0.284	-0.0505	No
174	CHCHD4	17067	17857	-0.289	-0.0383	No
175	PPP6C	7491	18000	-0.323	-0.0314	No
176	CHD4	8418 17281 4225	18201	-0.422	-0.0231	No
177	ENO1	8903	18309	-0.494	-0.0066	No
178	RAB10	2090 21119	18334	-0.514	0.0153	No