Details for gene set V$DR1

Table: GSEA Results Summary

Dataset	Set_04_DMproB_versus_LMproB.phenotype_DMproB_versus_LMproB.cls #DMproB_versus_LMproB
Phenotype	phenotype_DMproB_versus_LMproB.cls#DMproB_versus_LMproB
Upregulated in class	LMproB
GeneSet	V$DR1_Q3
Enrichment Score (ES)	-0.6097337
Normalized Enrichment Score (NES)	-1.4651071
Nominal p-value	0.013422819
FDR q-value	1.0
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NEDD9	3206 21483	320	0.441	0.0064	No
2	ESRRA	23802	527	0.299	0.0114	No
3	SEPX1	1600 23353	570	0.281	0.0243	No
4	GTF3C2	7749	585	0.276	0.0384	No
5	LAMP2	9267 2653	590	0.274	0.0530	No
6	TMEM24	19150	591	0.274	0.0678	No
7	VCL	22083	701	0.238	0.0748	No
8	MARK2	8899	741	0.226	0.0849	No
9	SATB1	5408	886	0.195	0.0876	No
10	PGF	21020	1215	0.143	0.0775	No
11	AGPS	14979	1272	0.136	0.0818	No
12	EIF4G1	22818	1424	0.118	0.0800	No
13	NPHP4	15978	1563	0.104	0.0782	No
14	USP52	3397 19841	1642	0.098	0.0792	No
15	DMD	24295 2647	1698	0.093	0.0813	No
16	RBBP6	5365	1823	0.084	0.0791	No
17	PCTK1	24369	1891	0.080	0.0798	No
18	TLK2	20628	1926	0.078	0.0821	No
19	BIN3	21969	1951	0.076	0.0849	No
20	ZSWIM3	14733	2024	0.071	0.0848	No
21	MAP3K11	11163	2083	0.067	0.0853	No
22	RBMS1	14580	2099	0.065	0.0880	No
23	NR2F1	7015 21401	2269	0.057	0.0819	No
24	RBKS	16568	2284	0.057	0.0843	No
25	LRP1	9284	2391	0.052	0.0813	No
26	CLDN15	16667 3572	2403	0.051	0.0835	No
27	SOX5	9850 1044 5480 16937	2527	0.046	0.0793	No
28	RASAL1	16719	2712	0.039	0.0714	No
29	HSD17B8	9061	2760	0.038	0.0709	No
30	SMTN	20551 1446	2840	0.035	0.0685	No
31	RQCD1	12205	2973	0.032	0.0631	No
32	SFRS6	14751	3050	0.031	0.0606	No
33	SYT4	5566	3186	0.028	0.0548	No
34	HIP2	3626 3485 16838	3260	0.026	0.0523	No
35	BAALC	4407 2201	3347	0.025	0.0489	No
36	SS18	6506 6505 2030	3378	0.024	0.0486	No
37	NCDN	15756 2487 6471	3455	0.023	0.0457	No
38	SELM	20967	3558	0.021	0.0414	No
39	PRRX2	15047	3588	0.021	0.0409	No
40	SNAP25	5466	3833	0.018	0.0287	No
41	CLDN10	21935 2785 2601 2720 7188	3853	0.018	0.0286	No
42	TIMELESS	10177	3901	0.017	0.0270	No
43	DNMT3A	2167 21330	4045	0.016	0.0201	No
44	PRODH2	1854 18300	4207	0.014	0.0121	No
45	PDZK1	15490	4536	0.012	-0.0050	No
46	HOXB3	20685	4603	0.012	-0.0080	No
47	HSPE1	9133	4607	0.012	-0.0075	No
48	LMX1B	14616	4634	0.012	-0.0083	No
49	UBE2R2	16240	4685	0.011	-0.0104	No
50	ZIC4	5992	4761	0.011	-0.0138	No
51	OVOL1	23983	4802	0.011	-0.0154	No
52	YBX2	20818	4848	0.010	-0.0173	No
53	GDPD2	24280	4893	0.010	-0.0191	No
54	PLEC1	2273 2198 2205 2178 2230 22247 2213 2231 2295 2172 5263 2266	5498	0.008	-0.0515	No
55	FGFR3	8969 3566	5865	0.007	-0.0709	No
56	PLA2G2F	15700	6062	0.006	-0.0812	No
57	ADAMTS19	23544	6366	0.005	-0.0974	No
58	NR2F2	8619 409	6497	0.005	-0.1042	No
59	FBLN1	4716 2208	6671	0.004	-0.1133	No
60	REST	16818	6743	0.004	-0.1169	No
61	TOMM70A	6608	6756	0.004	-0.1174	No
62	PPP1R14D	14471	6770	0.004	-0.1178	No
63	CKAP4	19663	6856	0.004	-0.1222	No
64	STMN2	15638	6864	0.004	-0.1224	No
65	PRDM16	12893	6904	0.004	-0.1243	No
66	GOLGA4	12022	7030	0.004	-0.1309	No
67	CNTFR	2515 15906	7282	0.003	-0.1443	No
68	INHBC	19603	7430	0.003	-0.1521	No
69	PIPOX	20340	7535	0.003	-0.1576	No
70	PCDH7	7029 3460	7582	0.003	-0.1600	No
71	SLC7A9	18291 1766	7607	0.003	-0.1611	No
72	GDNF	22514 2275	7937	0.002	-0.1789	No
73	NRAP	23642	8325	0.001	-0.1998	No
74	HS6ST2	6939 2646	8333	0.001	-0.2001	No
75	TOM1L2	10115	8337	0.001	-0.2002	No
76	NR4A3	9473 16212 5183	8351	0.001	-0.2009	No
77	MAP2K3	20856	8519	0.001	-0.2099	No
78	NEUROG2	15426	8524	0.001	-0.2100	No
79	PRDM1	19775 3337	8528	0.001	-0.2102	No
80	PTPRG	22097 3151	8637	0.001	-0.2160	No
81	TCF1	16416	8741	0.000	-0.2215	No
82	LMOD3	17059	8871	0.000	-0.2285	No
83	CRABP2	15554	8886	0.000	-0.2293	No
84	HMGCS2	15483	9161	-0.000	-0.2441	No
85	CLCNKA	15690	9164	-0.000	-0.2442	No
86	NFE2L2	2898 14557	9171	-0.000	-0.2445	No
87	HOXD3	9115	9206	-0.000	-0.2463	No
88	PAPLN	9301	9416	-0.001	-0.2576	No
89	KCNE1L	24044	9501	-0.001	-0.2621	No
90	TNNI1	14116	9558	-0.001	-0.2651	No
91	DUSP3	1358 13022	9566	-0.001	-0.2654	No
92	ARHGEF7	3823	9605	-0.001	-0.2674	No
93	EFNB3	20391	9703	-0.001	-0.2726	No
94	CDX1	23429	9719	-0.001	-0.2734	No
95	NR2C1	10215	9908	-0.001	-0.2835	No
96	POU5F1	1547 23255	10092	-0.002	-0.2933	No
97	DNAJA2	12133 18806	10432	-0.002	-0.3116	No
98	NR4A1	9099	10437	-0.002	-0.3116	No
99	TNRC4	15514	10496	-0.003	-0.3146	No
100	F12	3260 21453	10610	-0.003	-0.3206	No
101	BNIP3	17581	10612	-0.003	-0.3205	No
102	CSF2	20454	10990	-0.003	-0.3408	No
103	TREX1	10219 3111	11032	-0.004	-0.3428	No
104	MOSPD2	24009	11083	-0.004	-0.3453	No
105	PDLIM7	7434	11156	-0.004	-0.3490	No
106	HOXA3	9108 1075	11197	-0.004	-0.3510	No
107	CLCN2	22637	11483	-0.004	-0.3662	No
108	USP12	5825 5824	11532	-0.005	-0.3685	No
109	NFE2L3	17446	11581	-0.005	-0.3709	No
110	GPR124	18643 918	11601	-0.005	-0.3717	No
111	TTYH2	8585 4382 20605	11724	-0.005	-0.3780	No
112	HOXB6	20688	11908	-0.005	-0.3876	No
113	NDUFS1	13940	12045	-0.006	-0.3947	No
114	PAK1IP1	21660	12066	-0.006	-0.3954	No
115	INSR	18950	12083	-0.006	-0.3960	No
116	PAX7	15697	12415	-0.007	-0.4136	No
117	SLC7A7	21837 2911	12523	-0.007	-0.4190	No
118	LRRN1	17343	12551	-0.007	-0.4201	No
119	SLC39A5	3364 19596	12606	-0.007	-0.4226	No
120	EFEMP1	20937	12642	-0.007	-0.4241	No
121	SOD1	9846	12914	-0.008	-0.4383	No
122	CALM1	21184	12968	-0.008	-0.4408	No
123	FGF9	8966	13102	-0.009	-0.4475	No
124	HOXC13	22344	13107	-0.009	-0.4472	No
125	PLCD4	9587	13282	-0.010	-0.4561	No
126	RTN4	7569 1328 1343 1442	13433	-0.010	-0.4637	No
127	ERBB2	8913	13586	-0.011	-0.4714	No
128	TTYH1	2496 7176	13685	-0.012	-0.4760	No
129	GRPEL1	16863	13752	-0.012	-0.4790	No
130	MASP2	2547	14009	-0.014	-0.4921	No
131	SLC23A3	10367	14760	-0.020	-0.5317	No
132	TCN2	20550	15022	-0.023	-0.5446	No
133	PTHR1	5318 18985	15137	-0.025	-0.5494	No
134	DPF3	7659 12853	15325	-0.028	-0.5580	No
135	MOSPD1	12868 12869 7672	15826	-0.041	-0.5829	No
136	LGI4	18296	15841	-0.041	-0.5815	No
137	ARFGEF2	14728	15861	-0.042	-0.5803	No
138	ATP5O	22539	16134	-0.052	-0.5922	No
139	MCART1	10492	16237	-0.057	-0.5946	No
140	NR2F6	4651 8876 18848 8912	16411	-0.065	-0.6005	Yes
141	SSH2	6202	16461	-0.067	-0.5996	Yes
142	PPARGC1A	16533	16471	-0.068	-0.5964	Yes
143	AOC2	20658 1256	16513	-0.070	-0.5949	Yes
144	NET1	7100	16555	-0.072	-0.5932	Yes
145	MYH10	8077	16669	-0.079	-0.5951	Yes
146	SMYD5	17386	16682	-0.081	-0.5914	Yes
147	GBL	23091 1612	16757	-0.086	-0.5907	Yes
148	STOML2	15902	16775	-0.088	-0.5869	Yes
149	PAK4	17909	16798	-0.090	-0.5832	Yes
150	MAGMAS	1677 22678	16871	-0.094	-0.5820	Yes
151	USP37	13923	16997	-0.104	-0.5832	Yes
152	DCTN1	1100 17392	17316	-0.135	-0.5931	Yes
153	POLR2H	10888	17623	-0.171	-0.6005	Yes
154	PSMF1	6009	17687	-0.178	-0.5943	Yes
155	PFN1	9555	17745	-0.186	-0.5873	Yes
156	HSPD1	4078 9129	17794	-0.194	-0.5794	Yes
157	AP1B1	8599	17866	-0.206	-0.5722	Yes
158	MRPL11	23774	17898	-0.214	-0.5623	Yes
159	FKBP5	23051	17911	-0.216	-0.5513	Yes
160	EEF1B2	4131 12063	17949	-0.226	-0.5411	Yes
161	BRE	3640 4226 16879	17959	-0.228	-0.5293	Yes
162	ZBTB12	23268	18198	-0.321	-0.5249	Yes
163	PCBP4	12235	18219	-0.328	-0.5083	Yes
164	SLC25A1	22645	18264	-0.364	-0.4910	Yes
165	HIBADH	17144	18270	-0.367	-0.4715	Yes
166	TP53	20822	18592	-2.086	-0.3763	Yes
167	BOK	11953 14174	18608	-3.285	-0.1998	Yes
168	DCTN2	7635 12812	18611	-3.709	0.0003	Yes