Details for gene set NETPATH

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NETPATH_TCR
Enrichment Score (ES)	-0.68321925
Normalized Enrichment Score (NES)	-1.5859181
Nominal p-value	0.0
FDR q-value	0.047241885
FWER p-Value	0.529

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	22271	48	3.276	0.0783	No
2	YWHAQ	10369	828	0.997	0.0608	No
3	NCL	5153 13899	1013	0.835	0.0715	No
4	CEBPB	8733	1369	0.609	0.0673	No
5	TUBA4A	10232	2784	0.146	-0.0054	No
6	VASP	5847	2991	0.112	-0.0138	No
7	DLG1	22793 1672	3114	0.096	-0.0180	No
8	VAV3	1774 1848 15443	3728	0.051	-0.0499	No
9	STK39	14570	3778	0.049	-0.0513	No
10	CD3D	19473	3844	0.046	-0.0537	No
11	PIK3R2	18850	3916	0.043	-0.0565	No
12	SHC1	9813 9812 5430	3966	0.042	-0.0581	No
13	AKT1	8568	4238	0.034	-0.0719	No
14	DUSP3	1358 13022	4409	0.030	-0.0803	No
15	FYN	3375 3395 20052	5080	0.020	-0.1160	No
16	ITK	4934	5203	0.019	-0.1221	No
17	CD5	23741	5237	0.019	-0.1235	No
18	CD4	16999	5257	0.018	-0.1240	No
19	TXK	16513	5596	0.015	-0.1419	No
20	SRC	5507	5732	0.014	-0.1489	No
21	RAP1A	8467	6033	0.012	-0.1648	No
22	GRAP2	5113 9398	6108	0.012	-0.1685	No
23	STAT5B	20222	7328	0.007	-0.2342	No
24	SHB	10493	7716	0.005	-0.2549	No
25	NCK1	9447 5152	7822	0.005	-0.2605	No
26	CD3E	8714	8078	0.004	-0.2741	No
27	PTPN3	9661	8117	0.004	-0.2761	No
28	CD247	4498 8715	9037	0.002	-0.3257	No
29	ACP1	4317	9230	0.002	-0.3360	No
30	PTPN11	5326 16391 9660	9360	0.001	-0.3429	No
31	CD2AP	22975	10173	-0.001	-0.3868	No
32	CDC42	4503 8722 4504 2465	10407	-0.001	-0.3994	No
33	LYN	16281	10463	-0.001	-0.4023	No
34	SKAP2	17153	10553	-0.001	-0.4071	No
35	FYB	10717	10678	-0.002	-0.4137	No
36	INSL3	9181	10755	-0.002	-0.4178	No
37	PAG1	15376	11376	-0.004	-0.4512	No
38	CD3G	19139	11521	-0.004	-0.4589	No
39	TUBB2A	21493	11571	-0.004	-0.4614	No
40	NFATC2	5168 2866	11816	-0.005	-0.4745	No
41	ARHGEF7	3823	12085	-0.006	-0.4888	No
42	PIK3R1	3170	12501	-0.008	-0.5110	No
43	RIPK2	2528 15935	12516	-0.008	-0.5116	No
44	GAB2	1821 18184 2025	12547	-0.008	-0.5130	No
45	PLCG1	14753	12673	-0.009	-0.5195	No
46	PTPRH	11861	12912	-0.010	-0.5322	No
47	SOS1	5476	13043	-0.010	-0.5389	No
48	ABL1	2693 4301 2794	14038	-0.020	-0.5921	No
49	CRK	4559 1249	14123	-0.021	-0.5962	No
50	PTPN12	16597 3502 3586 3665	14152	-0.022	-0.5971	No
51	LAT	17643	14161	-0.022	-0.5970	No
52	CREB1	3990 8782 4558 4093	14348	-0.026	-0.6065	No
53	LCP2	4988 9268	14492	-0.028	-0.6135	No
54	ZAP70	14271 4042	14520	-0.029	-0.6142	No
55	CBL	19154	14583	-0.031	-0.6168	No
56	FOS	21202	14780	-0.038	-0.6265	No
57	PRKCQ	2873 2831	14804	-0.038	-0.6268	No
58	UNC119	20758	14934	-0.043	-0.6327	No
59	ENAH	4665 8901	15016	-0.046	-0.6359	No
60	STAT5A	20664	15080	-0.050	-0.6381	No
61	RAPGEF1	4218 2860	15195	-0.056	-0.6429	No
62	PTPN22	1775 15470	15214	-0.057	-0.6424	No
63	MAP2K1	19082	15278	-0.061	-0.6443	No
64	PTPRC	5327 9662	15526	-0.080	-0.6557	No
65	ARHGEF6	13297 13104	15877	-0.125	-0.6715	No
66	KHDRBS1	5405 9778	15928	-0.131	-0.6710	No
67	SH2D3C	2864	15941	-0.134	-0.6683	No
68	DEF6	23319	16218	-0.195	-0.6784	Yes
69	JAK3	9198 4936	16236	-0.199	-0.6744	Yes
70	PTPRJ	9664	16260	-0.207	-0.6706	Yes
71	DOCK2	8243	16268	-0.208	-0.6658	Yes
72	LCK	15746	16281	-0.210	-0.6613	Yes
73	ARHGDIB	16950	16436	-0.256	-0.6633	Yes
74	MAP4K1	18313	16615	-0.312	-0.6652	Yes
75	GRAP	20851	16686	-0.336	-0.6607	Yes
76	HOMER3	18590	16711	-0.343	-0.6535	Yes
77	RASA1	10174	16776	-0.365	-0.6479	Yes
78	SLA	5449	16936	-0.420	-0.6462	Yes
79	EVL	21156	16968	-0.430	-0.6372	Yes
80	CISH	8743	17015	-0.450	-0.6286	Yes
81	SH2D2A	6569	17090	-0.481	-0.6207	Yes
82	SOS2	21049	17109	-0.492	-0.6096	Yes
83	DTX1	16396	17166	-0.515	-0.5999	Yes
84	DBNL	20954	17191	-0.523	-0.5883	Yes
85	CARD11	8436	17271	-0.561	-0.5787	Yes
86	CRKL	4560	17368	-0.613	-0.5687	Yes
87	GRB2	20149	17370	-0.613	-0.5537	Yes
88	PSTPIP1	19437	17427	-0.656	-0.5405	Yes
89	SH3BP2	16874	17428	-0.656	-0.5243	Yes
90	JUN	15832	17458	-0.677	-0.5092	Yes
91	GIT2	11174 6462	17866	-0.975	-0.5071	Yes
92	SYK	21636	17870	-0.978	-0.4831	Yes
93	BCL10	15397	17878	-0.984	-0.4592	Yes
94	WIPF1	14560	17884	-0.991	-0.4350	Yes
95	VAV1	23173	17925	-1.033	-0.4117	Yes
96	WAS	24193	17956	-1.065	-0.3870	Yes
97	ABI1	4300	17981	-1.087	-0.3615	Yes
98	CBLB	5531 22734	18038	-1.159	-0.3359	Yes
99	PTK2B	21776	18118	-1.260	-0.3091	Yes
100	CREBBP	22682 8783	18124	-1.271	-0.2780	Yes
101	DNM2	4635 3103	18366	-1.824	-0.2460	Yes
102	WASF2	6326	18391	-1.916	-0.2000	Yes
103	NEDD9	3206 21483	18496	-2.487	-0.1442	Yes
104	PTPN6	17002	18512	-2.552	-0.0820	Yes
105	MAPK1	1642 11167	18573	-3.548	0.0023	Yes