Details for gene set V$MYOD

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch.phenotype_truncNotch_versus_wtNotch.cls #wtNotch_versus_truncNotch_repos
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#wtNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	V$MYOD_Q6
Enrichment Score (ES)	-0.53597873
Normalized Enrichment Score (NES)	-1.3711029
Nominal p-value	0.018957347
FDR q-value	0.7166681
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SPOP	450035	364	0.722	0.0097	No
2	NEDD4L	6380368	661	0.535	0.0155	No
3	ATP1B1	3130594	766	0.483	0.0296	No
4	MAP3K7IP2	2340242	775	0.481	0.0488	No
5	GALNT2	2260279 4060239	1140	0.351	0.0434	No
6	H2AFZ	1470168	1209	0.332	0.0532	No
7	OSR1	1500025	1264	0.319	0.0633	No
8	TLK2	1170161	1288	0.312	0.0748	No
9	PLAGL2	1770148	1306	0.305	0.0863	No
10	TMEM24	5860039	1346	0.295	0.0962	No
11	KCNH2	1170451	1437	0.268	0.1023	No
12	MMP11	1980619	2474	0.108	0.0505	No
13	WNT6	4570364	2497	0.106	0.0537	No
14	CHRNB1	1190671	2664	0.092	0.0484	No
15	ACADSB	520170	2765	0.084	0.0464	No
16	STRN3	1450093 6200685	2806	0.081	0.0476	No
17	PKP4	3710400 5890097	2809	0.081	0.0508	No
18	STK3	7100427	2932	0.072	0.0471	No
19	SMARCA5	6620050	2938	0.072	0.0498	No
20	GALR3	4850113	3182	0.056	0.0389	No
21	ADAM11	1050008 3130494	3259	0.052	0.0369	No
22	ZIC4	1500082	3443	0.044	0.0288	No
23	BLR1	1500300 5420017	3445	0.044	0.0305	No
24	NRF1	2650195	3507	0.042	0.0289	No
25	RIN1	510593	3517	0.041	0.0301	No
26	NLK	2030010 2450041	3545	0.040	0.0303	No
27	HS6ST3	5910138	3701	0.034	0.0233	No
28	LCN9	5050450	3845	0.030	0.0168	No
29	FBXO32	110037 610750	3896	0.029	0.0153	No
30	HTR7	2680176	3897	0.029	0.0164	No
31	EIF2C1	6900551	3904	0.029	0.0173	No
32	SSH2	360056	4096	0.024	0.0079	No
33	TRIM3	5570156	4213	0.022	0.0026	No
34	ASB14	5860427	4240	0.022	0.0020	No
35	MID1	4070114 4760458	4285	0.021	0.0005	No
36	CER1	840102	4379	0.020	-0.0037	No
37	PLCB1	2570050 7100102	4422	0.019	-0.0052	No
38	FGF17	3130022	4490	0.018	-0.0081	No
39	SREBF2	3390692	4495	0.018	-0.0076	No
40	USP15	610592 3520504	4508	0.018	-0.0075	No
41	COL4A4	1050541	4520	0.018	-0.0074	No
42	RHOBTB1	1410010	4528	0.018	-0.0070	No
43	TJP1	6350184	4547	0.017	-0.0073	No
44	ITGA6	3830129	4560	0.017	-0.0073	No
45	PPARGC1A	4670040	4653	0.016	-0.0116	No
46	VKORC1L1	110220 1400050	4817	0.014	-0.0199	No
47	KCNE1L	4670092	4877	0.014	-0.0225	No
48	KCNN3	6520600 6420138	5093	0.012	-0.0337	No
49	HR	2690095 6200300	5150	0.011	-0.0362	No
50	FUT8	1340068 2340056	5196	0.011	-0.0382	No
51	SEMA4C	1980315	5227	0.011	-0.0394	No
52	DSCAM	1780050 2450731 2810438	5269	0.011	-0.0412	No
53	EMX1	6130537	5285	0.010	-0.0416	No
54	DSCAML1	1850403 5550079	5653	0.008	-0.0611	No
55	DCT	1090347 3840494	5754	0.008	-0.0663	No
56	ANKRD2	6590427	5790	0.007	-0.0679	No
57	STARD13	540722	5793	0.007	-0.0677	No
58	LIN28	6590672	5827	0.007	-0.0692	No
59	GRID2	2680242	6135	0.006	-0.0856	No
60	KCNQ4	3800438 7050400	6238	0.005	-0.0909	No
61	TREX2	4920707	6535	0.004	-0.1067	No
62	NPEPPS	2630731	6563	0.004	-0.1080	No
63	COL4A3	5910075	6607	0.004	-0.1102	No
64	NEB	580735	6693	0.004	-0.1147	No
65	NBL1	2480021	6734	0.003	-0.1167	No
66	B3GALT2	430136	6876	0.003	-0.1242	No
67	GUCY1A3	110253 2640735 4070037	6919	0.003	-0.1264	No
68	SLC12A5	1980692	6961	0.003	-0.1285	No
69	CHRNG	5860273	7035	0.002	-0.1323	No
70	NHLH1	6100452	7193	0.002	-0.1408	No
71	FBXW11	6450632	7459	0.001	-0.1551	No
72	RASGRF2	1990047	7574	0.001	-0.1612	No
73	PTPRJ	4010707	7635	0.001	-0.1645	No
74	CHCHD3	4200044	7675	0.001	-0.1665	No
75	CCNL2	6520167	7961	-0.000	-0.1820	No
76	EFNA1	3840672	8028	-0.000	-0.1855	No
77	DPF3	2650128 2970168	8043	-0.000	-0.1863	No
78	FOXI1	3710095 6620195	8372	-0.001	-0.2040	No
79	CHRND	840403 2260670	8515	-0.002	-0.2116	No
80	ASB15	450563	8636	-0.002	-0.2180	No
81	MTUS1	780348 4920609	8638	-0.002	-0.2180	No
82	ABL2	580021	8680	-0.002	-0.2201	No
83	SOST	1170195	8793	-0.003	-0.2261	No
84	ARL4A	6290091	8931	-0.003	-0.2334	No
85	TAC4	4730070	9070	-0.003	-0.2408	No
86	TRPV3	540341	9289	-0.004	-0.2524	No
87	USF1	4280156 4610114 6370113	9354	-0.004	-0.2557	No
88	MAP3K13	3190017	9570	-0.005	-0.2672	No
89	PAK3	4210136	9648	-0.005	-0.2711	No
90	GATA2	6590280	9658	-0.005	-0.2714	No
91	ELAVL3	2850014	9961	-0.006	-0.2875	No
92	HDAC9	1990010 2260133	10013	-0.006	-0.2901	No
93	ARHGEF2	3360577	10082	-0.006	-0.2935	No
94	TTN	2320161 4670056 6550026	10134	-0.007	-0.2960	No
95	TGM1	1090500	10251	-0.007	-0.3020	No
96	INHA	6100102	10271	-0.007	-0.3027	No
97	CMYA1	6900632	10404	-0.008	-0.3096	No
98	ATOH7	5550121	10460	-0.008	-0.3122	No
99	LRAT	5130603	10743	-0.009	-0.3271	No
100	ALG6	4060131	10752	-0.009	-0.3272	No
101	MYOZ3	1990138	10895	-0.010	-0.3345	No
102	ANK2	6510546	10963	-0.010	-0.3377	No
103	HSD11B2	5900053	10970	-0.010	-0.3377	No
104	CDON	540204	10987	-0.010	-0.3381	No
105	KAZALD1	380603	11091	-0.011	-0.3433	No
106	ERBB4	4610400 4810017	11308	-0.012	-0.3545	No
107	BEX2	5670433	11569	-0.013	-0.3681	No
108	ERBB3	5890372	11878	-0.015	-0.3842	No
109	CASQ1	6290035 7000707	11953	-0.015	-0.3875	No
110	CYP26A1	380022 2690600	12057	-0.016	-0.3925	No
111	POU3F3	6400047	12323	-0.018	-0.4061	No
112	AP4S1	4730292	12481	-0.020	-0.4138	No
113	FSCN2	1230039	12490	-0.020	-0.4134	No
114	NPPC	2320647	12504	-0.020	-0.4133	No
115	RIMS2	670725	12541	-0.020	-0.4145	No
116	CUGBP1	450292 510022 7050176 7050215	13251	-0.028	-0.4517	No
117	NOL4	5050446 5360519	13315	-0.029	-0.4540	No
118	PROX1	4210193	13362	-0.030	-0.4553	No
119	MLLT6	3870168	13426	-0.031	-0.4574	No
120	CASKIN2	2030113	13732	-0.036	-0.4725	No
121	HN1	3360156	13757	-0.036	-0.4723	No
122	SYNGR1	5130452 6650056	13763	-0.036	-0.4711	No
123	PRKAG2	2340100	13820	-0.037	-0.4726	No
124	GGN	1410528 4210082 5290170	14054	-0.042	-0.4835	No
125	RND1	5080300	14147	-0.045	-0.4867	No
126	NKX6-2	2450332 3120333	14168	-0.045	-0.4859	No
127	MDGA1	1170139	14197	-0.046	-0.4856	No
128	PHACTR3	3850435 5900445	14303	-0.048	-0.4893	No
129	TBR1	5130053	14393	-0.050	-0.4921	No
130	CRAT	540020 2060364 3520148	14478	-0.053	-0.4945	No
131	SCG2	5670438 130671	14639	-0.058	-0.5007	No
132	POFUT1	1570458	14707	-0.060	-0.5019	No
133	NR2E1	4730288	14740	-0.061	-0.5012	No
134	USP2	1190292 1240253 4850035	14758	-0.062	-0.4996	No
135	ELAVL4	50735 3360086 5220167	14810	-0.064	-0.4997	No
136	PDGFB	3060440 6370008	14969	-0.070	-0.5054	No
137	SYT4	5080193	15095	-0.076	-0.5091	No
138	ACTN3	3140541 6480598	15137	-0.078	-0.5081	No
139	ITGB4	1740021 3840482	15402	-0.093	-0.5187	No
140	TNFRSF21	6380100	15441	-0.096	-0.5168	No
141	ITPR3	4010632	15594	-0.105	-0.5208	No
142	INVS	4200632 6620528	15703	-0.113	-0.5220	Yes
143	SIPA1	5220687	15726	-0.115	-0.5185	Yes
144	NCKIPSD	2940156	15787	-0.120	-0.5168	Yes
145	SPI1	1410397	15838	-0.125	-0.5144	Yes
146	CDH1	1940736	15952	-0.136	-0.5150	Yes
147	DEF6	840593	16024	-0.144	-0.5130	Yes
148	TEC	1400576	16025	-0.144	-0.5071	Yes
149	BCL9	7100112	16185	-0.161	-0.5092	Yes
150	CRELD1	2060253	16307	-0.176	-0.5086	Yes
151	PPP2R4	670280 2900097	16595	-0.213	-0.5154	Yes
152	ARID5A	2450133	16789	-0.242	-0.5161	Yes
153	TAGAP	3290433	16791	-0.242	-0.5062	Yes
154	PSTPIP1	3190156	17111	-0.293	-0.5116	Yes
155	HMGA1	6580408	17390	-0.349	-0.5124	Yes
156	PRKACA	2640731 4050048	17826	-0.471	-0.5168	Yes
157	GFRA1	3610152	17836	-0.478	-0.4977	Yes
158	ELOVL1	2450019 4760138 5340685	17838	-0.478	-0.4783	Yes
159	SELL	1190500	17938	-0.519	-0.4625	Yes
160	POLD4	2320082	18150	-0.660	-0.4470	Yes
161	GMPR	3990022	18346	-0.933	-0.4196	Yes
162	HEYL	5860528	18352	-0.937	-0.3816	Yes
163	TUFT1	540047 2370010	18473	-1.181	-0.3400	Yes
164	HES6	540411 6550504	18520	-1.504	-0.2812	Yes
165	CKM	1450524	18536	-1.575	-0.2177	Yes
166	IGF2	6510020	18590	-2.564	-0.1161	Yes
167	GNAS	630441 1850373 4050152	18597	-2.879	0.0010	Yes