Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.5567144
Normalized Enrichment Score (NES)	1.365518
Nominal p-value	0.016447369
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PABPC1	2650180 2690253 6020632 1990270	6	5.043	0.0789	Yes
2	TIMM10	610070 1450019	20	4.600	0.1505	Yes
3	PABPC4	1990170 6760270 5390138	33	3.900	0.2111	Yes
4	HMOX1	1740687	92	2.622	0.2492	Yes
5	ENO3	5270136	302	1.532	0.2619	Yes
6	AKAP12	1450739	321	1.471	0.2840	Yes
7	ABCB6	6350138	409	1.281	0.2994	Yes
8	SH3KBP1	670102 2850458 7000309	415	1.267	0.3191	Yes
9	IPO4	5050619	419	1.251	0.3386	Yes
10	FBL	5130020	420	1.249	0.3582	Yes
11	LYAR	7000402	461	1.171	0.3744	Yes
12	G6PC3	1580487 5390253	540	1.061	0.3869	Yes
13	RPS19	5860066	672	0.943	0.3946	Yes
14	EXOSC5	3370671	686	0.933	0.4085	Yes
15	PFDN2	4230156	738	0.895	0.4198	Yes
16	PPAT	1980019	740	0.895	0.4338	Yes
17	PA2G4	2030463	742	0.894	0.4478	Yes
18	EXOSC2	6900471	832	0.827	0.4560	Yes
19	GTF2H1	2570746 2650148	855	0.811	0.4676	Yes
20	NUDC	4780025	986	0.691	0.4714	Yes
21	HYAL2	1500152	1034	0.665	0.4793	Yes
22	SDC1	3440471 6350408	1070	0.645	0.4875	Yes
23	OPRS1	6130128 6290717	1100	0.628	0.4958	Yes
24	FKBP11	3170575	1126	0.610	0.5040	Yes
25	HMGN2	3140091	1250	0.558	0.5061	Yes
26	EIF4B	5390563 5270577	1274	0.548	0.5135	Yes
27	EIF2C2	770451	1325	0.528	0.5191	Yes
28	GPD1	2480095	1435	0.484	0.5208	Yes
29	PAICS	610142	1511	0.452	0.5238	Yes
30	HSPE1	3170438	1661	0.403	0.5220	Yes
31	RPL22	4070070	1675	0.397	0.5276	Yes
32	IVNS1ABP	4760601 6520113	1688	0.393	0.5331	Yes
33	MORF4L2	6450133	1725	0.384	0.5372	Yes
34	PSMB3	4280594	1768	0.372	0.5407	Yes
35	SRP72	3990427	1789	0.367	0.5454	Yes
36	POLR3E	380152	1855	0.347	0.5473	Yes
37	HERPUD1	7100440	1881	0.340	0.5513	Yes
38	ANXA6	2190014	1991	0.311	0.5503	Yes
39	EIF4G1	4070446	2065	0.292	0.5509	Yes
40	FHOD1	2680279	2097	0.283	0.5537	Yes
41	BCL9L	6940053	2123	0.279	0.5567	Yes
42	MYOHD1	1410520	2220	0.256	0.5555	No
43	POLR2H	5890242	2477	0.201	0.5448	No
44	SLC39A7	5570131	2659	0.171	0.5377	No
45	MPP3	1400056 4480411 6770168	2743	0.159	0.5357	No
46	MYST3	5270500	2753	0.158	0.5377	No
47	STMN1	1990717	2854	0.145	0.5345	No
48	CACNA1D	1740315 4730731	2891	0.140	0.5348	No
49	PSEN2	130382	2901	0.139	0.5364	No
50	PPARGC1B	3290114	2930	0.136	0.5371	No
51	CDC14A	4050132	2962	0.133	0.5375	No
52	B4GALT2	780037	3150	0.115	0.5291	No
53	UBE1	4150139 7050463	3187	0.112	0.5290	No
54	TIMM9	2450484	3376	0.094	0.5202	No
55	CNNM1	2190433	3649	0.074	0.5066	No
56	RUNX2	1400193 4230215	3699	0.070	0.5051	No
57	FARP1	5290102 7100341	3744	0.067	0.5038	No
58	AMPD2	630093 1170070	3769	0.066	0.5035	No
59	HSPH1	1690017	3981	0.055	0.4929	No
60	SLC26A2	2360278	4005	0.054	0.4925	No
61	SYT3	6380017	4014	0.053	0.4929	No
62	TNFRSF21	6380100	4046	0.052	0.4921	No
63	ARRDC3	4610390	4077	0.051	0.4912	No
64	BHLHB2	7040603	4158	0.048	0.4876	No
65	TIAL1	4150048 6510605	4191	0.046	0.4866	No
66	NLN	1450576 5870575	4277	0.044	0.4827	No
67	UBXD3	5050193	4291	0.043	0.4827	No
68	SUCLG2	5340397 5700270	4316	0.042	0.4820	No
69	CAMK4	1690091	4383	0.041	0.4791	No
70	EFNB1	2970433	4415	0.040	0.4780	No
71	SOCS5	3830398 7100093	4649	0.034	0.4659	No
72	ALDH3B1	4210010 6940403	4764	0.032	0.4603	No
73	AVP	2100113	4766	0.032	0.4607	No
74	DAZAP1	5890563	4812	0.031	0.4587	No
75	NR1D1	2360471 770746 6590204	5178	0.025	0.4393	No
76	GTF2A1	4120138 4920524 5390110 1230397	5284	0.024	0.4340	No
77	HOXA3	3610632 6020358	5425	0.022	0.4267	No
78	GPRC5C	1580372	5556	0.020	0.4200	No
79	SYT6	2510280 3850128 4540064	5610	0.020	0.4175	No
80	SEMA7A	2630239 5050593	5620	0.020	0.4173	No
81	HS3ST3A1	2230497	6008	0.016	0.3965	No
82	XRN2	130603 1230113 4230309	6018	0.016	0.3963	No
83	RUSC1	6450093 6980575	6079	0.016	0.3933	No
84	COL2A1	460446 3940500	6245	0.014	0.3846	No
85	PIGW	4810072	6396	0.013	0.3766	No
86	SC5DL	6650390	6468	0.013	0.3730	No
87	TBX4	3060008	6471	0.013	0.3731	No
88	LTBR	2450341	6494	0.013	0.3721	No
89	NXPH1	3870546	6751	0.011	0.3584	No
90	SGTB	460170	6903	0.010	0.3503	No
91	FGF14	2630390 3520075 6770048	7022	0.010	0.3441	No
92	ELOVL4	5220333	7027	0.010	0.3440	No
93	KIAA0427	1690435	7079	0.009	0.3414	No
94	DNAJB9	460114	7148	0.009	0.3378	No
95	BMP4	380113	7150	0.009	0.3379	No
96	ETV1	70735 2940603 5080463	7354	0.008	0.3270	No
97	PLA2G4A	6380364	7420	0.008	0.3236	No
98	DRD1	430025	7424	0.008	0.3236	No
99	RHEBL1	2810576	7552	0.007	0.3168	No
100	LIN28	6590672	7554	0.007	0.3169	No
101	SLC12A5	1980692	7708	0.007	0.3087	No
102	DNMT3A	4050068 4810717	7784	0.006	0.3047	No
103	POGK	5290315	7932	0.006	0.2968	No
104	SATB2	2470181	7962	0.006	0.2954	No
105	HOXC12	5270411	8110	0.005	0.2875	No
106	HOXC13	4070722	8182	0.005	0.2837	No
107	BMP2K	60541 5570504	8205	0.005	0.2826	No
108	GRIN2A	6550538	8554	0.004	0.2637	No
109	CGN	5890139 6370167 6400537	8556	0.004	0.2637	No
110	FGF11	840292	8843	0.003	0.2483	No
111	CHRM1	4280619	9256	0.001	0.2259	No
112	TLL1	2680315	9310	0.001	0.2231	No
113	SNX5	1570021 6860609	9427	0.001	0.2168	No
114	LAP3	2570064	9786	-0.000	0.1974	No
115	CTSF	6100021	9893	-0.001	0.1916	No
116	LRP8	3610746 5360035	9894	-0.001	0.1916	No
117	SIRT1	1190731	10151	-0.001	0.1778	No
118	ARX	6900504	10554	-0.003	0.1560	No
119	MTHFD1	5900398 6520427	10571	-0.003	0.1552	No
120	NKX2-3	1990736 6940088	10777	-0.003	0.1441	No
121	LHX9	2350112	10869	-0.004	0.1392	No
122	ABCA1	6290156	10872	-0.004	0.1392	No
123	FADS3	3120079	10916	-0.004	0.1369	No
124	ENPP6	110524 580563	10940	-0.004	0.1357	No
125	MAX	5220021	11143	-0.005	0.1248	No
126	PRKCE	5700053	11223	-0.005	0.1206	No
127	PAX6	1190025	11545	-0.006	0.1033	No
128	SLC6A15	5290176 6040017	11555	-0.006	0.1029	No
129	EIF3S1	6130368 6770044	11678	-0.006	0.0964	No
130	HPCA	6860010	11854	-0.007	0.0870	No
131	NPM1	4730427	11860	-0.007	0.0868	No
132	FLT3	2640487	12159	-0.009	0.0708	No
133	SET	6650286	12420	-0.010	0.0569	No
134	TDRD1	4230301 6110750	12534	-0.011	0.0509	No
135	SCFD2	2480504	12596	-0.011	0.0478	No
136	WEE1	3390070	13018	-0.014	0.0251	No
137	EEF1E1	4540711	13040	-0.014	0.0242	No
138	IPO13	3870088	13106	-0.014	0.0209	No
139	HPCAL4	2600484	13147	-0.015	0.0190	No
140	DAZL	4050082	13199	-0.015	0.0164	No
141	NPTX1	3710736	13341	-0.017	0.0091	No
142	HHIP	6940438	13385	-0.017	0.0070	No
143	ADAMTS17	6510739	13463	-0.018	0.0031	No
144	SNCAIP	4010551	13516	-0.018	0.0006	No
145	CHST11	6760546	13531	-0.018	0.0001	No
146	ETV4	2450605	13983	-0.025	-0.0240	No
147	CNOT4	2320242 6760706	14178	-0.028	-0.0341	No
148	MCM8	6130743	14349	-0.032	-0.0428	No
149	CLCN2	1940021	14536	-0.036	-0.0523	No
150	ADCY3	2350347 3440242	14619	-0.039	-0.0562	No
151	RPL13A	2680519 5700142	14717	-0.042	-0.0608	No
152	PER1	3290315	14719	-0.042	-0.0602	No
153	HOXA4	940152	15336	-0.075	-0.0924	No
154	SLC31A2	1450577	15445	-0.085	-0.0969	No
155	PTMA	5570148	15567	-0.096	-0.1020	No
156	BCKDHA	50189	15686	-0.108	-0.1067	No
157	CRMP1	4810014	15890	-0.132	-0.1156	No
158	GRK6	1500053	15906	-0.135	-0.1143	No
159	MNT	4920575	16026	-0.150	-0.1184	No
160	EIF4E	1580403 70133 6380215	16200	-0.177	-0.1250	No
161	RXRB	1780040 5340438	16248	-0.183	-0.1247	No
162	HSPA4	1050170 3450309	16253	-0.185	-0.1220	No
163	RPL19	5550592	16277	-0.188	-0.1203	No
164	MAT2A	4070026 4730079 6020280	16421	-0.215	-0.1247	No
165	GPX1	4150093	16538	-0.236	-0.1273	No
166	USP2	1190292 1240253 4850035	16553	-0.238	-0.1243	No
167	PDK2	2690017	16570	-0.243	-0.1213	No
168	MXD4	4810113	16630	-0.252	-0.1206	No
169	GNA13	4590102	16639	-0.254	-0.1170	No
170	CENTB5	5690128	16650	-0.255	-0.1135	No
171	ARF6	3520026	16734	-0.270	-0.1138	No
172	H3F3A	2900086	16916	-0.317	-0.1186	No
173	PFN1	6130132	17047	-0.354	-0.1201	No
174	SLC20A1	6420014	17083	-0.367	-0.1163	No
175	EIF5A	1500059 5290022 6370026	17168	-0.397	-0.1146	No
176	BCAS3	4050647	17388	-0.496	-0.1187	No
177	FCHSD2	5720092	17525	-0.558	-0.1173	No
178	TEF	1050050 3120397 4060487	17678	-0.631	-0.1156	No
179	ACVR2B	1660546	17778	-0.700	-0.1100	No
180	HSPBAP1	4060022	17865	-0.763	-0.1026	No
181	GABARAP	1450286	17920	-0.802	-0.0930	No
182	DIABLO	2360170	17935	-0.815	-0.0809	No
183	PPP1R9B	3130619	18215	-1.187	-0.0774	No
184	WBP2	3170128	18224	-1.201	-0.0590	No
185	RORC	1740121	18449	-1.922	-0.0409	No
186	BCL6	940100	18581	-3.177	0.0019	No