Details for gene set V$NMYC

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$NMYC_01
Enrichment Score (ES)	0.6228385
Normalized Enrichment Score (NES)	1.5124308
Nominal p-value	0.0
FDR q-value	0.5035021
FWER p-Value	0.824

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PABPC1	2650180 2690253 6020632 1990270	6	5.043	0.0864	Yes
2	TIMM10	610070 1450019	20	4.600	0.1647	Yes
3	PABPC4	1990170 6760270 5390138	33	3.900	0.2311	Yes
4	HMOX1	1740687	92	2.622	0.2731	Yes
5	VARS2	1410017 3800114 4210270	252	1.705	0.2937	Yes
6	CEBPB	2970019	282	1.602	0.3197	Yes
7	ATAD3A	4050288	328	1.448	0.3422	Yes
8	HSPD1	60097 2030451	334	1.441	0.3667	Yes
9	SH3KBP1	670102 2850458 7000309	415	1.267	0.3841	Yes
10	IPO4	5050619	419	1.251	0.4055	Yes
11	FBL	5130020	420	1.249	0.4269	Yes
12	PRDX4	3800039	440	1.206	0.4466	Yes
13	G6PC3	1580487 5390253	540	1.061	0.4595	Yes
14	VPS16	430064 3390041 6860301	630	0.976	0.4715	Yes
15	DLX1	360168	662	0.950	0.4861	Yes
16	ATP5G1	5290019	729	0.902	0.4980	Yes
17	PPAT	1980019	740	0.895	0.5129	Yes
18	PA2G4	2030463	742	0.894	0.5282	Yes
19	BCL7C	460050	895	0.776	0.5333	Yes
20	FKBP5	2190048	952	0.716	0.5426	Yes
21	HYAL2	1500152	1034	0.665	0.5496	Yes
22	HMGN2	3140091	1250	0.558	0.5475	Yes
23	EIF4B	5390563 5270577	1274	0.548	0.5557	Yes
24	LMNB1	5890292 6020008	1375	0.508	0.5590	Yes
25	NOL5A	5570139	1376	0.507	0.5677	Yes
26	GPD1	2480095	1435	0.484	0.5729	Yes
27	HSPE1	3170438	1661	0.403	0.5676	Yes
28	COPS7A	3940458 7000022	1668	0.401	0.5742	Yes
29	RPL22	4070070	1675	0.397	0.5807	Yes
30	PES1	2470427	1731	0.382	0.5843	Yes
31	FKBP10	1340706	1733	0.381	0.5908	Yes
32	SRP72	3990427	1789	0.367	0.5941	Yes
33	ELOVL6	5340746	1814	0.358	0.5989	Yes
34	POLR3E	380152	1855	0.347	0.6027	Yes
35	LIG3	2940300	1864	0.344	0.6082	Yes
36	GTPBP1	2230541 4560528	1879	0.340	0.6133	Yes
37	ZCCHC7	6510592	1934	0.326	0.6160	Yes
38	ANXA6	2190014	1991	0.311	0.6183	Yes
39	EIF4G1	4070446	2065	0.292	0.6193	Yes
40	FHOD1	2680279	2097	0.283	0.6225	Yes
41	KRTCAP2	5220040	2177	0.267	0.6228	Yes
42	GADD45G	2510142	2606	0.179	0.6027	No
43	MYST3	5270500	2753	0.158	0.5975	No
44	TLE3	580040 4730121	2826	0.149	0.5962	No
45	RAMP2	6860037	2851	0.146	0.5974	No
46	CACNA1D	1740315 4730731	2891	0.140	0.5976	No
47	PSEN2	130382	2901	0.139	0.5995	No
48	PPARGC1B	3290114	2930	0.136	0.6004	No
49	CDC14A	4050132	2962	0.133	0.6010	No
50	B4GALT2	780037	3150	0.115	0.5928	No
51	DUSP4	2690044 2850593	3175	0.113	0.5935	No
52	UBE1	4150139 7050463	3187	0.112	0.5948	No
53	RBBP6	2320129	3332	0.098	0.5887	No
54	MAPKAPK3	630520	3350	0.097	0.5894	No
55	TIMM9	2450484	3376	0.094	0.5897	No
56	NR5A1	70707	3404	0.092	0.5898	No
57	KCNK5	4590504 6860687	3589	0.078	0.5812	No
58	RUNX2	1400193 4230215	3699	0.070	0.5765	No
59	AMPD2	630093 1170070	3769	0.066	0.5738	No
60	BAI2	380632 630113 6650170	3902	0.059	0.5677	No
61	CTBP2	430309 3710079	3917	0.059	0.5680	No
62	ARRDC3	4610390	4077	0.051	0.5602	No
63	RAD9A	110300 1940632 3990390 6040014	4082	0.050	0.5609	No
64	PANK3	3060687	4092	0.050	0.5612	No
65	TIAL1	4150048 6510605	4191	0.046	0.5567	No
66	SOX12	1780037	4369	0.041	0.5478	No
67	ADPRHL1	4150133 6650300	4516	0.037	0.5405	No
68	RCL1	1980408 2680008 3800176	4561	0.036	0.5388	No
69	SOCS5	3830398 7100093	4649	0.034	0.5346	No
70	NR1D1	2360471 770746 6590204	5178	0.025	0.5064	No
71	NRXN1	460408 5340270 6370066	5179	0.025	0.5069	No
72	ANGPT2	1230458 5720706 6040605	5242	0.024	0.5039	No
73	TESK2	6520524	5352	0.023	0.4984	No
74	SEMA7A	2630239 5050593	5620	0.020	0.4843	No
75	GPC3	6180735	5671	0.019	0.4819	No
76	HS3ST3A1	2230497	6008	0.016	0.4639	No
77	XRN2	130603 1230113 4230309	6018	0.016	0.4637	No
78	COL2A1	460446 3940500	6245	0.014	0.4517	No
79	SC5DL	6650390	6468	0.013	0.4399	No
80	TPM2	520735 3870390	6735	0.011	0.4257	No
81	NXPH1	3870546	6751	0.011	0.4250	No
82	RTN4RL2	6450609	6893	0.010	0.4176	No
83	SGTB	460170	6903	0.010	0.4172	No
84	EN2	7000368	6984	0.010	0.4131	No
85	KIAA0427	1690435	7079	0.009	0.4081	No
86	DNAJB9	460114	7148	0.009	0.4046	No
87	ETV1	70735 2940603 5080463	7354	0.008	0.3936	No
88	PLA2G4A	6380364	7420	0.008	0.3902	No
89	LIN28	6590672	7554	0.007	0.3832	No
90	AKAP10	2630504 5910577	7651	0.007	0.3781	No
91	SLC12A5	1980692	7708	0.007	0.3751	No
92	DNMT3A	4050068 4810717	7784	0.006	0.3712	No
93	RNF128	1230300 5670273	7817	0.006	0.3696	No
94	POGK	5290315	7932	0.006	0.3635	No
95	SLC38A5	540093	8155	0.005	0.3515	No
96	HOXC13	4070722	8182	0.005	0.3502	No
97	BMP2K	60541 5570504	8205	0.005	0.3491	No
98	NRAS	6900577	8451	0.004	0.3359	No
99	GRIN2A	6550538	8554	0.004	0.3304	No
100	NKX2-2	4150731	8820	0.003	0.3161	No
101	FGF11	840292	8843	0.003	0.3149	No
102	ADAM10	3780156	8850	0.003	0.3147	No
103	PCDHA10	3830725	8977	0.002	0.3079	No
104	B3GALT2	430136	9020	0.002	0.3056	No
105	NUP153	7000452	9036	0.002	0.3048	No
106	SLC17A2	870593 2810035	9153	0.002	0.2986	No
107	CHRM1	4280619	9256	0.001	0.2931	No
108	LAP3	2570064	9786	-0.000	0.2644	No
109	CTSF	6100021	9893	-0.001	0.2586	No
110	MTHFD1	5900398 6520427	10571	-0.003	0.2220	No
111	ALX4	3870019	10656	-0.003	0.2175	No
112	GPS1	2470037 4760315 6200528 7100040	10659	-0.003	0.2174	No
113	STMN4	2900091	10727	-0.003	0.2138	No
114	LHX9	2350112	10869	-0.004	0.2062	No
115	ABCA1	6290156	10872	-0.004	0.2062	No
116	ENPP6	110524 580563	10940	-0.004	0.2026	No
117	BARHL1	4210113	11107	-0.004	0.1937	No
118	MAX	5220021	11143	-0.005	0.1919	No
119	PRKCE	5700053	11223	-0.005	0.1877	No
120	APOA5	6130471	11405	-0.006	0.1780	No
121	EIF3S1	6130368 6770044	11678	-0.006	0.1633	No
122	NEUROD2	5290097	11795	-0.007	0.1571	No
123	SEPT3	3830022 5290079	11806	-0.007	0.1567	No
124	HPCA	6860010	11854	-0.007	0.1543	No
125	NPM1	4730427	11860	-0.007	0.1542	No
126	FLT3	2640487	12159	-0.009	0.1381	No
127	SFXN2	2650563 3140095 3830762 3870398	12362	-0.010	0.1273	No
128	NEUROD6	4670731	12492	-0.010	0.1205	No
129	SCFD2	2480504	12596	-0.011	0.1151	No
130	NDUFS1	2650253	12667	-0.011	0.1115	No
131	PLAG1	1450142 3870139 6520039	12912	-0.013	0.0985	No
132	WEE1	3390070	13018	-0.014	0.0931	No
133	IPO13	3870088	13106	-0.014	0.0886	No
134	POU3F1	3710022	13314	-0.016	0.0776	No
135	HHIP	6940438	13385	-0.017	0.0741	No
136	ADAMTS17	6510739	13463	-0.018	0.0703	No
137	SNCAIP	4010551	13516	-0.018	0.0678	No
138	CHST11	6760546	13531	-0.018	0.0673	No
139	PLAGL1	3190082 6200193	13618	-0.019	0.0630	No
140	ZZZ3	780133 2320239 2640452 5080706 6550341	13796	-0.022	0.0538	No
141	CUGBP1	450292 510022 7050176 7050215	13867	-0.023	0.0504	No
142	DLC1	1090632 6450594	13911	-0.024	0.0484	No
143	JPH1	610739	14329	-0.032	0.0264	No
144	MCM8	6130743	14349	-0.032	0.0259	No
145	HRH3	6180040	14504	-0.035	0.0181	No
146	CLCN2	1940021	14536	-0.036	0.0171	No
147	HOXB7	4540706 4610358	14570	-0.037	0.0159	No
148	ADCY3	2350347 3440242	14619	-0.039	0.0140	No
149	RPL13A	2680519 5700142	14717	-0.042	0.0095	No
150	ZHX2	2900452	14917	-0.051	-0.0005	No
151	U2AF2	450600 4670128 5420292	15431	-0.084	-0.0268	No
152	SEMA3F	5420601 6770731	15538	-0.093	-0.0310	No
153	SCYL1	5050717	15861	-0.129	-0.0462	No
154	GRK6	1500053	15906	-0.135	-0.0463	No
155	MNT	4920575	16026	-0.150	-0.0502	No
156	RXRB	1780040 5340438	16248	-0.183	-0.0590	No
157	HRSP12	610136 2510133 4280561 2760047	16262	-0.186	-0.0565	No
158	ATP6V0B	2810112	16367	-0.204	-0.0586	No
159	PFKFB3	630706	16409	-0.212	-0.0572	No
160	TOP1	770471 4060632 6650324	16424	-0.215	-0.0543	No
161	USP2	1190292 1240253 4850035	16553	-0.238	-0.0571	No
162	PDK2	2690017	16570	-0.243	-0.0538	No
163	MXD4	4810113	16630	-0.252	-0.0527	No
164	GNA13	4590102	16639	-0.254	-0.0487	No
165	BCL2	730132 1570736 2470138 3800044 4810037 5690068 5860504 6650164	16684	-0.261	-0.0466	No
166	GADD45B	2350408	16698	-0.265	-0.0428	No
167	ARF6	3520026	16734	-0.270	-0.0400	No
168	RBM3	2360739 5700167	16766	-0.277	-0.0370	No
169	PFN1	6130132	17047	-0.354	-0.0461	No
170	SLC20A1	6420014	17083	-0.367	-0.0416	No
171	HTF9C	3190048 4120132	17477	-0.533	-0.0538	No
172	TEF	1050050 3120397 4060487	17678	-0.631	-0.0538	No
173	AP1GBP1	2510372	17744	-0.677	-0.0457	No
174	GJA1	5220731	17809	-0.725	-0.0367	No
175	STAT3	460040 3710341	17921	-0.802	-0.0289	No
176	RPIA	780079	17995	-0.863	-0.0180	No
177	WBP2	3170128	18224	-1.201	-0.0097	No
178	HBP1	2510102 3130010 4210619	18428	-1.800	0.0102	No