Details for gene set V$NKX61

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$NKX61_01
Enrichment Score (ES)	-0.6083646
Normalized Enrichment Score (NES)	-1.5580044
Nominal p-value	0.0
FDR q-value	0.13336867
FWER p-Value	0.513

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LMNA	520471 1500075 3190167 4210020	279	1.616	0.0289	No
2	WNT8B	4560301	438	1.211	0.0534	No
3	CUL3	1850520	579	1.029	0.0739	No
4	ATP2A2	1090075 3990279	812	0.849	0.0845	No
5	CXCL13	6290402	919	0.751	0.0992	No
6	MBNL2	3450707	1669	0.400	0.0695	No
7	TCF4	520021	2331	0.231	0.0400	No
8	VAMP3	7100050	2425	0.212	0.0408	No
9	TYRO3	3130193	2599	0.180	0.0363	No
10	NTNG2	1770438 6380408	2611	0.179	0.0406	No
11	ZADH2	520438	2797	0.153	0.0347	No
12	DTNA	1340600 1780731 2340278 2850132	2919	0.137	0.0319	No
13	STOML2	1940487	3023	0.128	0.0298	No
14	PLRG1	4480735	3027	0.128	0.0331	No
15	PRKAG1	6450091	3107	0.120	0.0321	No
16	CDC2L2	1400671 5290168	3224	0.109	0.0288	No
17	HOXC6	3850133 4920736	3257	0.106	0.0299	No
18	TBXAS1	5050053 6900286	3397	0.092	0.0249	No
19	RNF4	580286 1400152	3474	0.087	0.0232	No
20	EN1	5360168 7050025	3548	0.082	0.0215	No
21	NSD1	4560519 4780672	3560	0.081	0.0231	No
22	AMMECR1	3800435	3568	0.080	0.0249	No
23	NCOR1	3710132	3703	0.070	0.0195	No
24	SESN3	110687	3813	0.063	0.0153	No
25	SSBP3	870717 1050377 7040551	3872	0.061	0.0139	No
26	HESX1	4050746	3890	0.060	0.0146	No
27	ERG	50154 1770739	3953	0.057	0.0127	No
28	NR2F1	4120528 360402	3999	0.054	0.0118	No
29	DSG4	3990605 6400736	4045	0.052	0.0108	No
30	A2BP1	2370390 4590593 5550014	4218	0.046	0.0027	No
31	AOC2	520348 3120008	4230	0.045	0.0033	No
32	HABP2	5360541 6350273	4307	0.043	0.0004	No
33	FOXP2	3520561 4150372 4760524	4495	0.038	-0.0087	No
34	MID1	4070114 4760458	4520	0.037	-0.0090	No
35	ERMAP	780156	4723	0.033	-0.0191	No
36	ZRANB1	510373 4540278	4738	0.032	-0.0190	No
37	PDGFRA	2940332	5037	0.027	-0.0344	No
38	UBE2C	6130017	5140	0.025	-0.0392	No
39	OTP	2630070	5153	0.025	-0.0392	No
40	ANGPT2	1230458 5720706 6040605	5242	0.024	-0.0433	No
41	PLCB1	2570050 7100102	5484	0.021	-0.0557	No
42	ANXA10	4050750	5666	0.019	-0.0650	No
43	SLITRK3	5910041	5731	0.019	-0.0680	No
44	HOXC4	1940193	5751	0.018	-0.0685	No
45	CHCHD7	6620692	5873	0.017	-0.0746	No
46	MYF6	2690576	5913	0.017	-0.0762	No
47	CLOCK	1410070 2940292 3390075	5935	0.017	-0.0769	No
48	PPARGC1A	4670040	5938	0.017	-0.0766	No
49	MAN1C1	730133 870398 2340044	6087	0.015	-0.0842	No
50	GAD2	1400088	6372	0.013	-0.0992	No
51	HOXB8	3710450	6441	0.013	-0.1025	No
52	PRRX1	4120193 4480390	6452	0.013	-0.1027	No
53	HOXC10	5360170	6580	0.012	-0.1093	No
54	USF2	3870368 5570348 6940039	6621	0.012	-0.1111	No
55	LMO1	3170528	6765	0.011	-0.1186	No
56	FGFR2	4670601 5570402 6940377	6899	0.010	-0.1255	No
57	NHLH2	6200021	6946	0.010	-0.1277	No
58	PURA	3870156	7035	0.010	-0.1322	No
59	ODZ1	5050731	7113	0.009	-0.1361	No
60	PTPN22	1690647 7100239	7187	0.009	-0.1398	No
61	PHOX2B	5270075	7225	0.009	-0.1416	No
62	SLC26A7	1850398 3830377	7313	0.008	-0.1461	No
63	EYA1	1450278 5220390	7336	0.008	-0.1471	No
64	ESRRG	4010181	7440	0.008	-0.1524	No
65	SOX18	2320086	7491	0.008	-0.1549	No
66	ELP4	1230576	7809	0.006	-0.1719	No
67	SATB2	2470181	7962	0.006	-0.1800	No
68	IRX4	1980102	8269	0.005	-0.1965	No
69	NPR3	1580239	8419	0.004	-0.2044	No
70	RAB3C	5420072	8431	0.004	-0.2049	No
71	NEUROG1	380341	8583	0.004	-0.2130	No
72	MYT1	6770524	8692	0.003	-0.2187	No
73	LGI1	1850020	8832	0.003	-0.2262	No
74	ZFPM2	460072	9005	0.002	-0.2355	No
75	SDPR	3360292	9186	0.002	-0.2452	No
76	ELF4	4850193	9326	0.001	-0.2527	No
77	FGF7	5390484	9370	0.001	-0.2550	No
78	GNAT2	2450433	9412	0.001	-0.2572	No
79	LRRTM1	1690324	9435	0.001	-0.2583	No
80	BAI3	940692	9500	0.001	-0.2618	No
81	LHX6	2360731 3360397	9697	-0.000	-0.2724	No
82	HOXD8	3710156	9722	-0.000	-0.2737	No
83	C1QTNF7	2970619	9734	-0.000	-0.2743	No
84	CDKL5	2450070	10136	-0.001	-0.2960	No
85	FGF12	1740446 2360037	10144	-0.001	-0.2963	No
86	HSD17B2	3800541	10220	-0.002	-0.3004	No
87	BOC	5270348	10255	-0.002	-0.3022	No
88	P518	3610435	10461	-0.002	-0.3132	No
89	ARX	6900504	10554	-0.003	-0.3181	No
90	ACMSD	1450538	10649	-0.003	-0.3231	No
91	HSN2	610180	10691	-0.003	-0.3253	No
92	GABRB2	870059	10764	-0.003	-0.3291	No
93	WNT7A	1170315	10769	-0.003	-0.3292	No
94	KCNIP2	60088 1780324	10844	-0.004	-0.3331	No
95	PTPRD	520008 3120097	10876	-0.004	-0.3347	No
96	HOXA11	6980133	11187	-0.005	-0.3514	No
97	MLSTD1	3710184	11209	-0.005	-0.3524	No
98	NR4A3	2900021 5860095 5910039	11354	-0.005	-0.3600	No
99	SLC6A15	5290176 6040017	11555	-0.006	-0.3707	No
100	CREB5	2320368	11672	-0.006	-0.3768	No
101	COL11A2	5130341	11700	-0.007	-0.3781	No
102	TBX5	2900132 6370484	11744	-0.007	-0.3802	No
103	KCNJ16	4780273	11750	-0.007	-0.3803	No
104	NEUROD2	5290097	11795	-0.007	-0.3825	No
105	RARB	430139 1410138	12049	-0.008	-0.3960	No
106	GK2	6510736	12171	-0.009	-0.4023	No
107	CGA	630403	12431	-0.010	-0.4161	No
108	NEUROD6	4670731	12492	-0.010	-0.4191	No
109	FUT11	6040692	12546	-0.011	-0.4216	No
110	KLF15	4230164	12771	-0.012	-0.4334	No
111	DMP1	4760398	12790	-0.012	-0.4341	No
112	TCL1A	3420367	12860	-0.013	-0.4375	No
113	SV2A	1450039 5570685	12866	-0.013	-0.4374	No
114	RIMS2	670725	13108	-0.014	-0.4501	No
115	ALDH1A2	2320301	13576	-0.019	-0.4749	No
116	SLC6A4	2230372	13655	-0.020	-0.4785	No
117	ITGA7	1230739	13958	-0.024	-0.4942	No
118	PLCD4	6450040	14008	-0.025	-0.4962	No
119	PRDM13	1430022	14065	-0.026	-0.4985	No
120	POU3F4	870274	14290	-0.031	-0.5098	No
121	SOX5	2370576 2900167 3190128 5050528	14297	-0.031	-0.5093	No
122	PCSK2	360017 430528 5900619	14369	-0.032	-0.5123	No
123	APOBEC2	1690520	14394	-0.033	-0.5127	No
124	AP3M2	6370474	14556	-0.037	-0.5204	No
125	RHOBTB3	4010687	14925	-0.051	-0.5389	No
126	MDGA1	1170139	15050	-0.057	-0.5441	No
127	FHL1	60278	15297	-0.073	-0.5554	No
128	MYO10	3830576 5570092	15344	-0.076	-0.5558	No
129	ZIC4	1500082	15644	-0.104	-0.5692	No
130	SLC12A6	610278 1980035 5340671	15685	-0.108	-0.5684	No
131	RAB5B	130397 1980273 6900731	16133	-0.168	-0.5881	No
132	KLHL5	3060484 6400292	16186	-0.175	-0.5861	No
133	PPP3CB	6020156	16598	-0.248	-0.6016	Yes
134	FOXP3	940707 1850692	16687	-0.262	-0.5992	Yes
135	FLI1	3990142	16746	-0.273	-0.5949	Yes
136	LARGE	6940068	16862	-0.304	-0.5929	Yes
137	KCNN3	6520600 6420138	16898	-0.313	-0.5862	Yes
138	CHD2	4070039	16974	-0.332	-0.5812	Yes
139	MARCKS	7040450	16986	-0.336	-0.5727	Yes
140	SLC20A1	6420014	17083	-0.367	-0.5679	Yes
141	NDUFA4	6860364	17112	-0.377	-0.5591	Yes
142	RPA3	5700136	17431	-0.515	-0.5623	Yes
143	TRIM8	6130441	17475	-0.533	-0.5501	Yes
144	HNRPA0	2680048	17550	-0.569	-0.5386	Yes
145	GATA3	6130068	17582	-0.581	-0.5244	Yes
146	ARID5A	2450133	17697	-0.643	-0.5131	Yes
147	HOXA7	5910152	17729	-0.661	-0.4967	Yes
148	SOX4	2260091	17765	-0.693	-0.4797	Yes
149	TOB1	4150138	17791	-0.710	-0.4617	Yes
150	CLK2	510079 2630736	17817	-0.730	-0.4432	Yes
151	SH3BGRL3	1850750	18299	-1.376	-0.4317	Yes
152	HSD11B1	450066 5550408	18314	-1.402	-0.3942	Yes
153	ZFP36L1	2510138 4120048	18471	-2.052	-0.3467	Yes
154	ETS2	360451	18475	-2.094	-0.2898	Yes
155	DUSP6	5910286 7100070	18498	-2.291	-0.2285	Yes
156	CCND2	5340167	18548	-2.713	-0.1572	Yes
157	TLE4	1450064 1500519	18549	-2.720	-0.0831	Yes
158	BCL6	940100	18581	-3.177	0.0019	Yes