Details for gene set V$LEF1

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$LEF1_Q2
Enrichment Score (ES)	0.5944158
Normalized Enrichment Score (NES)	1.4275038
Nominal p-value	0.008361204
FDR q-value	1.0
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARID1A	2630022 1690551 4810110	3	6.330	0.1338	Yes
2	SDHC	3140347 6100156	4	5.878	0.2581	Yes
3	TIMM10	610070 1450019	20	4.600	0.3546	Yes
4	SLC6A9	2470520	204	1.842	0.3837	Yes
5	CD160	4210377	371	1.347	0.4032	Yes
6	SMYD2	5050026	413	1.270	0.4278	Yes
7	SYTL1	510487	427	1.224	0.4530	Yes
8	WNT8B	4560301	438	1.211	0.4781	Yes
9	NDUFS3	1690136 5340528	777	0.874	0.4783	Yes
10	BMI1	3830026 2630204	842	0.820	0.4922	Yes
11	UBE4B	780008 3610154	852	0.812	0.5089	Yes
12	PRKRIR	2370402	910	0.758	0.5218	Yes
13	GLUD1	4210372	938	0.730	0.5358	Yes
14	DHCR24	840600 1050672 6290097	1007	0.680	0.5465	Yes
15	CNR2	2760398	1025	0.669	0.5598	Yes
16	ELOVL1	2450019 4760138 5340685	1153	0.598	0.5656	Yes
17	DYRK3	1090014	1263	0.555	0.5714	Yes
18	RRM1	4150433	1302	0.536	0.5807	Yes
19	RPA2	2760301 5420195	1374	0.508	0.5876	Yes
20	SYT13	5910110	1438	0.484	0.5944	Yes
21	AHCYL1	540609	1939	0.325	0.5742	No
22	SEMA4G	5890026	1955	0.321	0.5802	No
23	EIF4G2	3800575 6860184	2335	0.229	0.5645	No
24	YARS	70739	2440	0.209	0.5633	No
25	BSCL2	2680671	2495	0.199	0.5646	No
26	EFNA4	4280309 6550576	2545	0.189	0.5660	No
27	NDUFC2	580075	2909	0.138	0.5492	No
28	NCDN	50040 1980739 3520603	3043	0.126	0.5447	No
29	RUNX3	3800546	3117	0.119	0.5433	No
30	TRIM33	580619 2230280 3990433 6200747	3420	0.091	0.5288	No
31	RNF11	3990068 5080458	3436	0.090	0.5299	No
32	PDC	3140400 3780184	3559	0.081	0.5250	No
33	SLC25A28	6590600	3580	0.079	0.5256	No
34	AMPD3	610369 3360528	3755	0.067	0.5176	No
35	MOV10	50673 430577 3870280	3774	0.066	0.5180	No
36	TMEM9	130039	3845	0.062	0.5155	No
37	BAI2	380632 630113 6650170	3902	0.059	0.5138	No
38	DUSP10	2850673 3360064	4142	0.048	0.5019	No
39	MMP21	4480673	4184	0.047	0.5006	No
40	TIAL1	4150048 6510605	4191	0.046	0.5013	No
41	HABP2	5360541 6350273	4307	0.043	0.4960	No
42	SOX6	2940458 4070601 6840717	4414	0.040	0.4911	No
43	DDR2	7050273	4518	0.037	0.4863	No
44	HNRPR	2320440 2900601 4610008	4750	0.032	0.4744	No
45	SCUBE2	2850315 5130040	4825	0.031	0.4711	No
46	GRK5	1940348 4670053	4939	0.029	0.4656	No
47	COL13A1	4120079	4976	0.028	0.4642	No
48	ELF5	3140156 5220020	5112	0.026	0.4575	No
49	RERE	3940279	5188	0.025	0.4539	No
50	VAX1	6660750	5235	0.024	0.4519	No
51	CLCNKA	1740050	5519	0.021	0.4371	No
52	PTCH2	2900092	5694	0.019	0.4280	No
53	RGL1	1500097 6900450	5824	0.018	0.4214	No
54	CACNB2	1500095 7330707	5868	0.017	0.4195	No
55	MRVI1	4810338 4850601 5900441	6362	0.014	0.3931	No
56	MPZ	1990333	6432	0.013	0.3896	No
57	PRRX1	4120193 4480390	6452	0.013	0.3888	No
58	DKK1	1940215	6485	0.013	0.3874	No
59	MFN2	2260195 6100164	6501	0.012	0.3868	No
60	ANK3	1500161 2900435 4210154 6400100	6673	0.012	0.3778	No
61	LMO1	3170528	6765	0.011	0.3731	No
62	HIAT1	1580176	6838	0.011	0.3694	No
63	PTPRJ	4010707	6845	0.010	0.3693	No
64	NEUROG3	6980451	6935	0.010	0.3647	No
65	SORCS1	60411 5890373	6942	0.010	0.3646	No
66	NHLH2	6200021	6946	0.010	0.3647	No
67	PLA2G4A	6380364	7420	0.008	0.3392	No
68	ESRRG	4010181	7440	0.008	0.3384	No
69	PHTF1	7050441	7530	0.007	0.3337	No
70	LIN28	6590672	7554	0.007	0.3326	No
71	IL20	4850647	7930	0.006	0.3125	No
72	SH2D4B	670204	8165	0.005	0.2999	No
73	PVRL4	2340048 6220195	8338	0.004	0.2907	No
74	TCERG1L	3360707	8365	0.004	0.2894	No
75	RCN1	2480041	8405	0.004	0.2873	No
76	DPYD	6110095	8479	0.004	0.2835	No
77	SLC17A6	4210576	8483	0.004	0.2834	No
78	TLL2	6220040	8524	0.004	0.2813	No
79	CGN	5890139 6370167 6400537	8556	0.004	0.2797	No
80	IL19	6040142	8766	0.003	0.2684	No
81	CUBN	630338	8779	0.003	0.2679	No
82	AP4B1	2900300	8845	0.003	0.2644	No
83	SPOCK2	6650369	9522	0.001	0.2278	No
84	GAB2	1410280 2340520 4280040	9538	0.000	0.2270	No
85	LRP8	3610746 5360035	9894	-0.001	0.2078	No
86	GNG3	6980397	10097	-0.001	0.1969	No
87	NEXN	1240017 5290047	10118	-0.001	0.1958	No
88	SLC22A8	3520204	10157	-0.001	0.1938	No
89	SERPINC1	1780717	10444	-0.002	0.1784	No
90	UBE2D1	1850400	10639	-0.003	0.1679	No
91	LRRTM3	4210021	11334	-0.005	0.1305	No
92	COL11A1	2100300 2810136 4200706 4810524	11436	-0.006	0.1251	No
93	PAX6	1190025	11545	-0.006	0.1194	No
94	LPHN2	4480010	11649	-0.006	0.1140	No
95	PROX1	4210193	11969	-0.008	0.0968	No
96	SFXN2	2650563 3140095 3830762 3870398	12362	-0.010	0.0758	No
97	NEK7	4540026	12718	-0.012	0.0569	No
98	BSND	1780041	12737	-0.012	0.0561	No
99	SV2A	1450039 5570685	12866	-0.013	0.0495	No
100	ASB13	1090070	12897	-0.013	0.0481	No
101	ZFYVE9	6980288 7100017	13163	-0.015	0.0341	No
102	PAK1	4540315	13205	-0.015	0.0322	No
103	RET	3850746	13211	-0.015	0.0322	No
104	WNT9A	3830711	13234	-0.015	0.0314	No
105	EPHA2	5890056	13415	-0.017	0.0220	No
106	KBTBD4	70465 3840093	13485	-0.018	0.0186	No
107	LHX4	6940551	13625	-0.020	0.0115	No
108	LEMD1	3990132 5720187	13747	-0.021	0.0054	No
109	NPPA	6550328	13790	-0.022	0.0036	No
110	OVOL1	1690131	13918	-0.024	-0.0027	No
111	DGAT2	5130685	13930	-0.024	-0.0028	No
112	SLC26A9	3440722 5340088 7510093	14227	-0.029	-0.0182	No
113	NAV1	4210519 6620129	14317	-0.032	-0.0224	No
114	CYP2E1	4480209	14353	-0.032	-0.0236	No
115	ARNT	1170672 5670711	14409	-0.033	-0.0259	No
116	ADAM12	3390132 4070347	15187	-0.066	-0.0666	No
117	UAP1	3060093	15443	-0.085	-0.0786	No
118	SLC16A9	6220497	15505	-0.091	-0.0799	No
119	GFRA1	3610152	15534	-0.093	-0.0795	No
120	ENTPD7	1980601	15595	-0.099	-0.0806	No
121	CNTF	450128 870253 1780068 6520195	15639	-0.104	-0.0808	No
122	ELAVL4	50735 3360086 5220167	15832	-0.126	-0.0885	No
123	S100A3	6400563	15916	-0.136	-0.0901	No
124	TCF7L2	2190348 5220113	15948	-0.141	-0.0888	No
125	ACTR1A	5860070	15965	-0.143	-0.0867	No
126	FRAG1	1050504 1170152 2030092	16093	-0.161	-0.0901	No
127	PANK1	670091 6220605	16261	-0.186	-0.0953	No
128	CREM	840156 6380438 6660041 6660168	16364	-0.204	-0.0965	No
129	TACSTD2	6660341	16465	-0.223	-0.0972	No
130	SIPA1	5220687	16478	-0.225	-0.0931	No
131	ADD3	4150739 5390600	16573	-0.243	-0.0930	No
132	CEPT1	1940047	16642	-0.255	-0.0913	No
133	DCLRE1B	540070 4730373 5550176	16672	-0.260	-0.0874	No
134	ADRBK1	1340333	16790	-0.283	-0.0877	No
135	ARL3	5690725	16973	-0.331	-0.0906	No
136	TSG101	770148	17252	-0.435	-0.0964	No
137	PTPN7	3450110	17336	-0.473	-0.0909	No
138	PRDM2	780278 1940692	17488	-0.538	-0.0877	No
139	SCAMP3	2360707	17732	-0.662	-0.0869	No
140	EIF4EBP2	5670279	17798	-0.716	-0.0752	No
141	SLC43A3	430168 5220400	17910	-0.794	-0.0645	No
142	UCP2	2190050 4070711	18091	-0.994	-0.0532	No
143	GADD45A	2900717	18099	-1.001	-0.0324	No
144	HSD11B1	450066 5550408	18314	-1.402	-0.0143	No
145	CAP1	2650278	18327	-1.446	0.0156	No