Details for gene set V$GFI1

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	V$GFI1_01
Enrichment Score (ES)	-0.61404014
Normalized Enrichment Score (NES)	-1.5796858
Nominal p-value	0.0
FDR q-value	0.1394209
FWER p-Value	0.397

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP5G2	840068	684	0.934	-0.0194	No
2	ABCF2	630040 3140035 6450601	714	0.919	-0.0035	No
3	SREBF2	3390692	723	0.908	0.0133	No
4	CSAD	770215	728	0.903	0.0303	No
5	MBNL1	2640762 7100048	822	0.837	0.0411	No
6	HMGA1	6580408	824	0.834	0.0569	No
7	MCTS1	6130133	995	0.688	0.0608	No
8	EXOC7	3060037	1184	0.587	0.0617	No
9	USP5	4850017	1252	0.557	0.0687	No
10	MYO1C	3190398	1679	0.396	0.0531	No
11	TMPRSS2	2970279	1694	0.392	0.0598	No
12	SFRS2	50707 380593	1912	0.330	0.0542	No
13	BCL9L	6940053	2123	0.279	0.0481	No
14	TRAF4	3060041 4920528 6980286	2176	0.267	0.0504	No
15	TCF4	520021	2331	0.231	0.0464	No
16	PPP2R2A	2900014 5700575	2484	0.200	0.0420	No
17	XPO5	2850286	2744	0.159	0.0309	No
18	STMN1	1990717	2854	0.145	0.0278	No
19	GPR17	5890671	2917	0.137	0.0270	No
20	PPARGC1B	3290114	2930	0.136	0.0290	No
21	MYH10	2640673	2949	0.134	0.0305	No
22	TRIM23	580168 6510672	2984	0.132	0.0312	No
23	PRKAG1	6450091	3107	0.120	0.0268	No
24	PRIMA1	1500673 6760671	3533	0.082	0.0053	No
25	PDC	3140400 3780184	3559	0.081	0.0055	No
26	TLK1	7100605	3570	0.080	0.0065	No
27	MTMR4	4540524	3746	0.067	-0.0017	No
28	ETS1	5270278 6450717 6620465	3819	0.063	-0.0044	No
29	WDR23	2030372	3881	0.060	-0.0066	No
30	GPRC5D	4760021	3906	0.059	-0.0068	No
31	PDE4D	2470528 6660014	3914	0.059	-0.0060	No
32	NR2F2	3170609 3310577	4149	0.048	-0.0178	No
33	DNAJB4	380195 2760372 3940735	4224	0.045	-0.0210	No
34	CNTN6	2630711	4370	0.041	-0.0281	No
35	RPS6KB1	1450427 5080110 6200563	4372	0.041	-0.0274	No
36	DPF3	2650128 2970168	4445	0.039	-0.0305	No
37	CNKSR1	730528 3390672	4449	0.039	-0.0299	No
38	HOXC8	6220050	4452	0.039	-0.0293	No
39	FOXP2	3520561 4150372 4760524	4495	0.038	-0.0309	No
40	DDR2	7050273	4518	0.037	-0.0314	No
41	HOXA9	610494 4730040 5130601	4660	0.034	-0.0384	No
42	GAS2	1340082	4711	0.033	-0.0405	No
43	AVP	2100113	4766	0.032	-0.0428	No
44	ICAM5	2350647	4809	0.031	-0.0445	No
45	DSG3	3940014	4970	0.028	-0.0526	No
46	CRYZL1	730022 2320044	4991	0.028	-0.0532	No
47	HIVEP3	3990551	5026	0.027	-0.0545	No
48	OTP	2630070	5153	0.025	-0.0609	No
49	HOXA3	3610632 6020358	5425	0.022	-0.0752	No
50	HOXB6	4210739	5445	0.022	-0.0758	No
51	HOXB3	520292	5473	0.021	-0.0769	No
52	ZIC1	670113	5539	0.021	-0.0800	No
53	ASB4	2100064 3060059	5633	0.020	-0.0847	No
54	ANGPT1	3990368 5130288 6770035	5684	0.019	-0.0870	No
55	HOXC4	1940193	5751	0.018	-0.0902	No
56	MAP2K7	2260086	5805	0.018	-0.0928	No
57	CACNB2	1500095 7330707	5868	0.017	-0.0958	No
58	PPARGC1A	4670040	5938	0.017	-0.0992	No
59	HIST1H1E	6980706	6027	0.016	-0.1037	No
60	SOSTDC1	6760017	6029	0.016	-0.1035	No
61	SOX9	5720681	6113	0.015	-0.1077	No
62	NFIA	2760129 5860278	6439	0.013	-0.1251	No
63	HOXB8	3710450	6441	0.013	-0.1249	No
64	HOXA10	6110397 7100458	6442	0.013	-0.1246	No
65	SP8	4060576	6627	0.012	-0.1344	No
66	PHF8	70722	6718	0.011	-0.1391	No
67	RKHD3	6180471	6720	0.011	-0.1389	No
68	PURA	3870156	7035	0.010	-0.1558	No
69	HIST1H1T	130632	7125	0.009	-0.1604	No
70	BMP4	380113	7150	0.009	-0.1616	No
71	CALN1	3610722	7423	0.008	-0.1762	No
72	JPH4	780020	7568	0.007	-0.1839	No
73	EBF2	940324	7877	0.006	-0.2005	No
74	MSR1	940538	7891	0.006	-0.2010	No
75	DSPP	5890403	7934	0.006	-0.2032	No
76	CLMN	1340446 1660433 2940670	7984	0.006	-0.2058	No
77	BDNF	2940128 3520368	8004	0.006	-0.2067	No
78	HOXD11	2260242	8020	0.006	-0.2074	No
79	NGEF	3190538	8032	0.006	-0.2079	No
80	GPR20	6620601	8109	0.005	-0.2119	No
81	PROCR	4920687	8374	0.004	-0.2262	No
82	GRPR	6020170	8433	0.004	-0.2292	No
83	SOX15	2470603	8506	0.004	-0.2331	No
84	PCDH8	2360047 4200452	8537	0.004	-0.2346	No
85	CGN	5890139 6370167 6400537	8556	0.004	-0.2355	No
86	CAMK2D	2370685	8562	0.004	-0.2357	No
87	HOXD10	6100039	8634	0.003	-0.2395	No
88	ITSN1	2640577	8639	0.003	-0.2397	No
89	SLC26A3	380750	8851	0.003	-0.2511	No
90	ZFPM2	460072	9005	0.002	-0.2593	No
91	CDH6	4730541	9043	0.002	-0.2613	No
92	CHRM1	4280619	9256	0.001	-0.2728	No
93	DCX	130075 5360025 7050673	9306	0.001	-0.2754	No
94	BAI3	940692	9500	0.001	-0.2859	No
95	PHYHIP	1170377	9728	-0.000	-0.2982	No
96	CACNG3	520093	9732	-0.000	-0.2984	No
97	C1QTNF7	2970619	9734	-0.000	-0.2984	No
98	EDN1	1770047	9775	-0.000	-0.3006	No
99	PBX1	6660301	9823	-0.000	-0.3031	No
100	PTHLH	5290739	9842	-0.000	-0.3041	No
101	NEXN	1240017 5290047	10118	-0.001	-0.3190	No
102	YWHAE	5310435	10135	-0.001	-0.3199	No
103	NKX2-8	50022	10186	-0.001	-0.3225	No
104	SGK2	1850070	10306	-0.002	-0.3290	No
105	ZIC3	380020	10740	-0.003	-0.3524	No
106	NRXN3	1400546 3360471	10911	-0.004	-0.3616	No
107	CDH13	5130368 5340114	10944	-0.004	-0.3632	No
108	ICAM4	6770053	10978	-0.004	-0.3649	No
109	DEPDC2	5220102	11266	-0.005	-0.3804	No
110	DSCR1L1	940438	11352	-0.005	-0.3849	No
111	TFEC	1170722	11489	-0.006	-0.3922	No
112	PI15	3840133	11541	-0.006	-0.3949	No
113	CREB5	2320368	11672	-0.006	-0.4018	No
114	SLC25A18	4540047	11911	-0.007	-0.4146	No
115	CDON	540204	11918	-0.008	-0.4148	No
116	MRGPRF	4780746	11966	-0.008	-0.4172	No
117	RARB	430139 1410138	12049	-0.008	-0.4215	No
118	GFRA3	6510609	12069	-0.008	-0.4223	No
119	BNC2	4810603	12209	-0.009	-0.4297	No
120	GREM1	3940180	12219	-0.009	-0.4300	No
121	JMJD1C	940575 2120025	12357	-0.010	-0.4373	No
122	MEF2C	670025 780338	12418	-0.010	-0.4403	No
123	TLR1	1410524	12692	-0.011	-0.4549	No
124	CPEB3	3940164	12700	-0.011	-0.4551	No
125	KLF15	4230164	12771	-0.012	-0.4587	No
126	TPBG	630161	13069	-0.014	-0.4745	No
127	SPAG7	4560524	13072	-0.014	-0.4744	No
128	TSGA10	450594 3130435 4920093	13139	-0.015	-0.4777	No
129	POU3F1	3710022	13314	-0.016	-0.4868	No
130	ARHGEF2	3360577	13426	-0.017	-0.4925	No
131	KLF12	1660095 4810288 5340546 6520286	13474	-0.018	-0.4947	No
132	MEIS1	1400575	13595	-0.019	-0.5009	No
133	SH3BGRL2	1780239	13606	-0.019	-0.5010	No
134	HOXA6	2340333	13812	-0.022	-0.5117	No
135	PHACTR3	3850435 5900445	13954	-0.024	-0.5189	No
136	PLCD4	6450040	14008	-0.025	-0.5213	No
137	RAB6B	5860121	14163	-0.028	-0.5292	No
138	TRDN	1580411	14202	-0.029	-0.5307	No
139	TBR1	5130053	14207	-0.029	-0.5303	No
140	SOX5	2370576 2900167 3190128 5050528	14297	-0.031	-0.5346	No
141	NCAM1	3140026	14373	-0.033	-0.5380	No
142	IRX3	4200112	14498	-0.035	-0.5441	No
143	LUZP1	940075 4280458 6180070	14608	-0.038	-0.5493	No
144	CDX2	3850349	14621	-0.039	-0.5492	No
145	ELMO3	110372 2640019	14691	-0.041	-0.5522	No
146	BCL9	7100112	14784	-0.045	-0.5563	No
147	ITGA10	6330438	15171	-0.065	-0.5760	No
148	LAMA3	1190131 5290239	15380	-0.078	-0.5858	No
149	TCF1	5390022	15393	-0.079	-0.5850	No
150	BPGM	5080520	15423	-0.083	-0.5850	No
151	ZIC4	1500082	15644	-0.104	-0.5949	No
152	ATF2	2260348 2480441	15731	-0.113	-0.5974	No
153	RKHD1	6860577	15745	-0.114	-0.5960	No
154	SLC4A7	2370056	15772	-0.118	-0.5951	No
155	ELAVL4	50735 3360086 5220167	15832	-0.126	-0.5960	No
156	GRK6	1500053	15906	-0.135	-0.5974	No
157	RORA	380164 5220215	15921	-0.137	-0.5955	No
158	TFB1M	2190110	15968	-0.143	-0.5953	No
159	MAP2K5	2030440	16064	-0.156	-0.5975	No
160	PDLIM1	450100	16117	-0.165	-0.5972	No
161	PANK1	670091 6220605	16261	-0.186	-0.6014	No
162	BRUNOL4	4490452 5080451	16269	-0.187	-0.5982	No
163	CREM	840156 6380438 6660041 6660168	16364	-0.204	-0.5995	No
164	TOP1	770471 4060632 6650324	16424	-0.215	-0.5986	No
165	SERTAD4	130593	16514	-0.230	-0.5990	No
166	ADD3	4150739 5390600	16573	-0.243	-0.5976	No
167	MAP4K3	5390551	16794	-0.284	-0.6041	No
168	PEA15	4590685	16911	-0.315	-0.6044	No
169	PTEN	3390064	17072	-0.362	-0.6062	Yes
170	TCTA	2680687	17217	-0.420	-0.6061	Yes
171	TCF12	3610324 7000156	17226	-0.423	-0.5985	Yes
172	POLH	2690528	17311	-0.459	-0.5943	Yes
173	HNRPA0	2680048	17550	-0.569	-0.5964	Yes
174	HOXA7	5910152	17729	-0.661	-0.5935	Yes
175	SOX4	2260091	17765	-0.693	-0.5822	Yes
176	PREP	6220292	17848	-0.750	-0.5724	Yes
177	IRF2BP1	3170019	17851	-0.753	-0.5582	Yes
178	AGPAT4	6040079	17883	-0.777	-0.5452	Yes
179	GABARAP	1450286	17920	-0.802	-0.5319	Yes
180	BRD2	1450300 5340484 6100605	18040	-0.926	-0.5207	Yes
181	GADD45A	2900717	18099	-1.001	-0.5049	Yes
182	MAP3K3	610685	18205	-1.159	-0.4885	Yes
183	EVA1	5690538	18228	-1.211	-0.4667	Yes
184	HSD11B1	450066 5550408	18314	-1.402	-0.4447	Yes
185	CTLA4	6590537	18369	-1.563	-0.4179	Yes
186	MAP4K2	4200037	18375	-1.598	-0.3878	Yes
187	HBP1	2510102 3130010 4210619	18428	-1.800	-0.3565	Yes
188	IL16	3850168	18515	-2.441	-0.3148	Yes
189	CCR7	2060687	18568	-3.010	-0.2604	Yes
190	BCL6	940100	18581	-3.177	-0.2007	Yes
191	BTG1	4200735 6040131 6200133	18610	-4.873	-0.1096	Yes
192	RHOA	580142 5900131 5340450	18614	-5.784	0.0001	Yes