Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$E2F_Q3
Enrichment Score (ES)	0.5448863
Normalized Enrichment Score (NES)	1.292469
Nominal p-value	0.0464
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPA1	4670398 5050687	57	3.108	0.0636	Yes
2	TFRC	4050551	123	2.289	0.1092	Yes
3	MCM6	60092 540181 6510110	127	2.248	0.1573	Yes
4	CDC6	4570296 5360600	153	2.049	0.1999	Yes
5	DPYSL2	2100427 3130112 5700324	166	1.977	0.2417	Yes
6	GCH1	670364 6550358	170	1.958	0.2835	Yes
7	NCL	2360463 4540279	341	1.422	0.3048	Yes
8	MCM4	2760673 5420711	342	1.420	0.3353	Yes
9	TCP1	2450100 5130524	431	1.221	0.3567	Yes
10	SHMT1	5900132	683	0.936	0.3632	Yes
11	ABCF2	630040 3140035 6450601	714	0.919	0.3813	Yes
12	RBBP7	430113 450450 2370309	786	0.864	0.3960	Yes
13	SLC25A3	670112	850	0.814	0.4101	Yes
14	IMPDH2	5220138	874	0.797	0.4259	Yes
15	RFC1	1190673	882	0.785	0.4424	Yes
16	UNG	3130110 6100364	1073	0.643	0.4459	Yes
17	APRIN	2810050	1166	0.595	0.4537	Yes
18	HIST1H2BK	6130433	1182	0.587	0.4655	Yes
19	HMGN2	3140091	1250	0.558	0.4738	Yes
20	PRPS1	6350129	1321	0.529	0.4814	Yes
21	PIAS1	5340301	1436	0.484	0.4856	Yes
22	E2F1	5360093	1439	0.484	0.4959	Yes
23	DLST	2320722	1488	0.461	0.5032	Yes
24	OLFML3	7100463	1630	0.413	0.5044	Yes
25	NASP	2260139 2940369 5130707	1657	0.404	0.5117	Yes
26	LIG1	1980438 4540112 5570609	1700	0.391	0.5178	Yes
27	ZCCHC8	2260332 2350487	1808	0.360	0.5197	Yes
28	DNAJC11	360465 3390215	1866	0.344	0.5240	Yes
29	BAT3	1990594	1907	0.332	0.5289	Yes
30	SFRS2	50707 380593	1912	0.330	0.5358	Yes
31	PPP1R8	6290292	1965	0.318	0.5398	Yes
32	MCM3	5570068	2036	0.300	0.5425	Yes
33	SLC38A1	520465	2110	0.281	0.5445	Yes
34	TBX6	4730139 6840647	2295	0.237	0.5397	Yes
35	POLA2	940519	2355	0.226	0.5413	Yes
36	DNMT1	2260097	2456	0.205	0.5403	Yes
37	RBBP4	6650528	2589	0.182	0.5371	Yes
38	MCM7	3290292 5220056	2682	0.168	0.5357	Yes
39	GMNN	2630148	2742	0.159	0.5359	Yes
40	EPHB2	1090288 1410377 2100541	2761	0.157	0.5383	Yes
41	STMN1	1990717	2854	0.145	0.5365	Yes
42	RANBP1	430215 1090180	2860	0.145	0.5393	Yes
43	CLTA	450010	2911	0.138	0.5395	Yes
44	KCNA1	2030594	2948	0.135	0.5405	Yes
45	PHF15	6550066 6860673	2960	0.133	0.5427	Yes
46	CPNE5	6380673	2974	0.133	0.5449	Yes
47	KPNB1	1690138	3047	0.126	0.5437	No
48	MCM2	5050139	3131	0.118	0.5417	No
49	SNPH	2680484	3475	0.087	0.5250	No
50	NDUFA11	3780333	3489	0.086	0.5262	No
51	ERBB2IP	580253 1090672	3517	0.084	0.5265	No
52	PAPOLG	2470400	3539	0.082	0.5271	No
53	STAG2	4540132	3554	0.081	0.5281	No
54	CDC25A	3800184	3629	0.076	0.5257	No
55	ADAMTS2	2650025 6370133 6840670	3752	0.067	0.5206	No
56	LASP1	1690528 2190341 6420341	3803	0.064	0.5192	No
57	SSBP3	870717 1050377 7040551	3872	0.061	0.5168	No
58	CNOT3	130519 4480292 1990609	3985	0.055	0.5120	No
59	CDCA7	3060097	4164	0.047	0.5033	No
60	RAD51	6110450 6980280	4169	0.047	0.5041	No
61	KCND2	1170128 2100112	4285	0.043	0.4988	No
62	KLF4	1850022 3830239 5570750	4373	0.041	0.4950	No
63	AP4M1	70609 3440128	4493	0.038	0.4894	No
64	RHD	4050168	4643	0.034	0.4820	No
65	CDC45L	70537 3130114	4662	0.034	0.4818	No
66	PRKDC	1400072 4230541	4834	0.030	0.4732	No
67	HS6ST3	5910138	4851	0.030	0.4730	No
68	ATRX	2340039 3610132 4210373	4867	0.030	0.4728	No
69	PAQR4	730736	4916	0.029	0.4708	No
70	SEMA5A	6200110 6520435	4968	0.028	0.4687	No
71	E2F3	50162 460180	5098	0.026	0.4622	No
72	ARID4A	520156 1050707	5122	0.026	0.4615	No
73	GRIK2	4610164	5344	0.023	0.4501	No
74	CTDSP1	6650215 6940731	5626	0.020	0.4353	No
75	SALL1	5420020 7050195	5642	0.020	0.4349	No
76	NRP2	4070400 5860041 6650446	6000	0.016	0.4159	No
77	FBXO5	2630551	6593	0.012	0.3841	No
78	STK35	2360121	6695	0.011	0.3789	No
79	MRPL18	6560341	6911	0.010	0.3675	No
80	HNRPD	4120021	7164	0.009	0.3540	No
81	ARHGAP6	2060121	7460	0.008	0.3382	No
82	TOPBP1	6020333	7521	0.007	0.3351	No
83	UFD1L	870020	7546	0.007	0.3340	No
84	HIST1H1D	3440446	7974	0.006	0.3110	No
85	POLE2	6110041	8218	0.005	0.2979	No
86	NPR3	1580239	8419	0.004	0.2872	No
87	PODN	3710068	8511	0.004	0.2823	No
88	NUP153	7000452	9036	0.002	0.2540	No
89	ONECUT1	6450136	9341	0.001	0.2376	No
90	AP1S2	780279 4280707	9355	0.001	0.2369	No
91	TREX2	4920707	9473	0.001	0.2306	No
92	TBX3	2570672	10327	-0.002	0.1844	No
93	SEZ6	3450722	10344	-0.002	0.1836	No
94	PCSK1	2350148	10601	-0.003	0.1698	No
95	IPO7	2190746	10678	-0.003	0.1658	No
96	CACNA1G	3060161 4810706 5550722	10720	-0.003	0.1636	No
97	EPHB1	4610056	10898	-0.004	0.1541	No
98	BARHL1	4210113	11107	-0.004	0.1429	No
99	ORC1L	2370328 6110390	11186	-0.005	0.1388	No
100	FMO4	360735	11247	-0.005	0.1357	No
101	ASCL1	6650100	11377	-0.005	0.1288	No
102	PEG3	3710020	11485	-0.006	0.1231	No
103	SMAD6	870504	12013	-0.008	0.0948	No
104	CASP8AP2	5910593	12227	-0.009	0.0834	No
105	WEE1	3390070	13018	-0.014	0.0410	No
106	LHX5	2350097	13191	-0.015	0.0320	No
107	ADCY8	6760519	13215	-0.015	0.0310	No
108	DMD	1740041 3990332	13276	-0.016	0.0281	No
109	CBX5	3830072 6290167	13487	-0.018	0.0172	No
110	MEIS1	1400575	13595	-0.019	0.0118	No
111	SLC6A4	2230372	13655	-0.020	0.0090	No
112	DDB2	3520341 4610168 4850184 4920717	13836	-0.023	-0.0003	No
113	NOL4	5050446 5360519	13842	-0.023	-0.0000	No
114	TRIM47	5080717	14111	-0.027	-0.0140	No
115	UXT	110019 5080066	14276	-0.031	-0.0222	No
116	JPH1	610739	14329	-0.032	-0.0243	No
117	MCM8	6130743	14349	-0.032	-0.0247	No
118	INSM1	3450671	14946	-0.053	-0.0558	No
119	MDGA1	1170139	15050	-0.057	-0.0602	No
120	ATAD2	870242 2260687	15205	-0.067	-0.0671	No
121	PVRL1	2570167 5220519 5890500 3190309	15320	-0.074	-0.0716	No
122	H2AFZ	1470168	15338	-0.075	-0.0709	No
123	HIST1H2AH	3710333	15718	-0.111	-0.0891	No
124	E2F7	4200056	15752	-0.115	-0.0884	No
125	ATE1	290491 6940722	15858	-0.128	-0.0913	No
126	ING3	110438 2060390	15975	-0.145	-0.0945	No
127	KLF5	3840348	16019	-0.150	-0.0936	No
128	PLK4	430162 5720110	16081	-0.159	-0.0935	No
129	EZH2	6130605 6380524	16236	-0.182	-0.0979	No
130	PCSK4	130687 670711 3170075 6400411	16358	-0.203	-0.1001	No
131	USP1	2760541 5690438 6220673	16388	-0.207	-0.0973	No
132	MAT2A	4070026 4730079 6020280	16421	-0.215	-0.0944	No
133	FLI1	3990142	16746	-0.273	-0.1061	No
134	CTCF	5340017	16777	-0.280	-0.1017	No
135	SFRS1	2360440	16829	-0.295	-0.0981	No
136	PCNA	940754	16965	-0.328	-0.0984	No
137	SLC25A14	4760180	17263	-0.438	-0.1051	No
138	PPP1CC	6380300 2510647	17334	-0.473	-0.0987	No
139	MAZ	3360121 6940750	17389	-0.497	-0.0910	No
140	HTF9C	3190048 4120132	17477	-0.533	-0.0842	No
141	PHF13	450435	17483	-0.535	-0.0730	No
142	PIM1	630047	17505	-0.548	-0.0624	No
143	PHF12	870400 3130687	17745	-0.678	-0.0608	No
144	RAB11B	3990609	17899	-0.786	-0.0522	No
145	MXD3	6220014	17936	-0.815	-0.0367	No
146	SYT11	630433	18118	-1.030	-0.0244	No
147	DCK	6900411	18512	-2.390	0.0056	No