Details for gene set V$AP4

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	wtNotch
GeneSet	V$AP4_Q6
Enrichment Score (ES)	0.5385428
Normalized Enrichment Score (NES)	1.2803847
Nominal p-value	0.05123967
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARID1A	2630022 1690551 4810110	3	6.330	0.1598	Yes
2	TPM3	670600 3170296 5670167 6650471	19	4.650	0.2766	Yes
3	INPPL1	110717 3120164	24	4.268	0.3842	Yes
4	UBTF	4210450 6840403	121	2.292	0.4369	Yes
5	PTPRS	510414 4010215 6400139 6770348	235	1.743	0.4749	Yes
6	SYTL1	510487	427	1.224	0.4955	Yes
7	PRKACA	2640731 4050048	889	0.782	0.4903	Yes
8	PRICKLE1	450671	1085	0.637	0.4958	Yes
9	PTK7	380315	1222	0.569	0.5029	Yes
10	HMGN2	3140091	1250	0.558	0.5155	Yes
11	RAB3A	3940288	1429	0.488	0.5182	Yes
12	ABHD4	6760450	1457	0.475	0.5288	Yes
13	TRAPPC3	2030176 6020609 6590373 6760019	1492	0.460	0.5385	Yes
14	VAT1	1050040	1827	0.355	0.5294	No
15	NDST2	6290711	1911	0.330	0.5333	No
16	TRAF4	3060041 4920528 6980286	2176	0.267	0.5257	No
17	VAMP3	7100050	2425	0.212	0.5177	No
18	BSCL2	2680671	2495	0.199	0.5190	No
19	RAMP2	6860037	2851	0.146	0.5034	No
20	STOML2	1940487	3023	0.128	0.4974	No
21	CNNM2	2650100	3124	0.118	0.4950	No
22	GAS7	2120358 6450494	3298	0.102	0.4882	No
23	TNFSF4	3940594	3805	0.064	0.4624	No
24	CREB3L1	2350687	4097	0.050	0.4479	No
25	GRIK3	6380592	4197	0.046	0.4437	No
26	EPOR	5290435	4271	0.044	0.4409	No
27	SOX12	1780037	4369	0.041	0.4367	No
28	RPS6KB1	1450427 5080110 6200563	4372	0.041	0.4376	No
29	INHA	6100102	4527	0.037	0.4302	No
30	TMOD3	840088	4664	0.034	0.4237	No
31	ERN1	2360403	4692	0.033	0.4231	No
32	ZRANB1	510373 4540278	4738	0.032	0.4215	No
33	FGF8	6350504	4756	0.032	0.4213	No
34	FRAS1	5080170 5670347	5236	0.024	0.3960	No
35	HAPLN2	2900647	5237	0.024	0.3966	No
36	CTDSP1	6650215 6940731	5626	0.020	0.3761	No
37	PALM2	4120068 7100398	5628	0.020	0.3766	No
38	PTCH2	2900092	5694	0.019	0.3735	No
39	HOXC4	1940193	5751	0.018	0.3710	No
40	RTKN	5910253 6380082	5765	0.018	0.3707	No
41	PITX3	3130162	5818	0.018	0.3684	No
42	CACNB2	1500095 7330707	5868	0.017	0.3662	No
43	PLXNB3	130008	5881	0.017	0.3659	No
44	KCNE1L	4670092	6052	0.016	0.3571	No
45	ANXA8	4780022	6064	0.016	0.3569	No
46	DLL3	4010093	6209	0.015	0.3495	No
47	TNNT2	2450364	6276	0.014	0.3463	No
48	DOCK4	5910102	6324	0.014	0.3441	No
49	PICALM	1940280	6478	0.013	0.3361	No
50	EMILIN3	5130181	6544	0.012	0.3329	No
51	NXPH3	5860292	6575	0.012	0.3316	No
52	SYTL2	580097 5390576 6770603	6613	0.012	0.3299	No
53	ABLIM1	580170 3710338 6520504	6741	0.011	0.3233	No
54	NEUROG3	6980451	6935	0.010	0.3131	No
55	GRIN2B	3800333	7052	0.010	0.3071	No
56	EYA1	1450278 5220390	7336	0.008	0.2920	No
57	OBSCN	3610129	7479	0.008	0.2845	No
58	ASB16	1940152	7758	0.007	0.2696	No
59	WNT4	4150619	7931	0.006	0.2604	No
60	CHRNG	5860273	7935	0.006	0.2604	No
61	HOXC12	5270411	8110	0.005	0.2511	No
62	TRPC4	6040022	8233	0.005	0.2446	No
63	TNRC4	4050156	8253	0.005	0.2437	No
64	STARD13	540722	8398	0.004	0.2360	No
65	MID2	4120309	8630	0.003	0.2236	No
66	FBXO24	1230132 4610121	8707	0.003	0.2196	No
67	PRKCQ	2260170 3870193	9203	0.001	0.1928	No
68	ASB5	2760575	9299	0.001	0.1877	No
69	LBX1	1300164 4060204	9304	0.001	0.1875	No
70	ELF4	4850193	9326	0.001	0.1864	No
71	GNB3	1230167	9402	0.001	0.1824	No
72	KCNMA1	1450402	9448	0.001	0.1800	No
73	PCDH12	5340044	9519	0.001	0.1762	No
74	SPOCK2	6650369	9522	0.001	0.1761	No
75	FOSL2	870044 1230427 6520433	9576	0.000	0.1732	No
76	MAP3K13	3190017	9941	-0.001	0.1536	No
77	SOST	1170195	10029	-0.001	0.1489	No
78	GNG3	6980397	10097	-0.001	0.1453	No
79	MYBPH	2190711	10110	-0.001	0.1447	No
80	SUV39H2	1450672 6370242	10128	-0.001	0.1438	No
81	FGF12	1740446 2360037	10144	-0.001	0.1430	No
82	PCYT1B	1780402	10241	-0.002	0.1378	No
83	CADPS	2320181	10562	-0.003	0.1206	No
84	NES	1190672 2450167	10581	-0.003	0.1197	No
85	KCNQ4	3800438 7050400	10648	-0.003	0.1162	No
86	CACNA1G	3060161 4810706 5550722	10720	-0.003	0.1124	No
87	PGF	4810593	10786	-0.003	0.1090	No
88	RGS7	3390044	11203	-0.005	0.0866	No
89	FOXD3	6550156	11353	-0.005	0.0786	No
90	PROK2	540538	11419	-0.006	0.0753	No
91	XPNPEP1	2640750 3850315 6200242	11493	-0.006	0.0715	No
92	KIRREL2	130168 3440097	11987	-0.008	0.0450	No
93	RBMS3	6110722	12095	-0.008	0.0394	No
94	RXRG	7040008	12323	-0.009	0.0273	No
95	JMJD1C	940575 2120025	12357	-0.010	0.0258	No
96	HOXB5	2900538	12487	-0.010	0.0191	No
97	CPEB3	3940164	12700	-0.011	0.0079	No
98	DHRS3	360609	12770	-0.012	0.0045	No
99	LOXL4	6520095	12795	-0.012	0.0035	No
100	MLLT7	4480707	13009	-0.014	-0.0077	No
101	FHL3	1090369 2650017	13142	-0.015	-0.0145	No
102	WNT9A	3830711	13234	-0.015	-0.0190	No
103	EPHA2	5890056	13415	-0.017	-0.0283	No
104	ARHGEF2	3360577	13426	-0.017	-0.0284	No
105	KCNN2	990025 3520524	13556	-0.019	-0.0350	No
106	PABPC5	2320408	13684	-0.020	-0.0413	No
107	FBXO40	2190286 5670253	13714	-0.021	-0.0424	No
108	NPPA	6550328	13790	-0.022	-0.0459	No
109	HOXA6	2340333	13812	-0.022	-0.0464	No
110	AKAP2	5550347	14090	-0.027	-0.0608	No
111	HFE2	2100138 3850148	14271	-0.030	-0.0697	No
112	ARNT	1170672 5670711	14409	-0.033	-0.0763	No
113	MYLK	4010600 7000364	14743	-0.043	-0.0932	No
114	PDE3A	380068	14901	-0.050	-0.1005	No
115	RASGRF2	1990047	14966	-0.053	-0.1026	No
116	AICDA	2340487 3800672	15077	-0.058	-0.1071	No
117	WNT2B	3130088 5960575	15115	-0.061	-0.1075	No
118	BCL2L2	2760692 6770739	15194	-0.066	-0.1101	No
119	NANOS1	1300402	15425	-0.083	-0.1204	No
120	TCF7	3800736 5390181	15467	-0.088	-0.1204	No
121	WDTC1	1690541	15489	-0.090	-0.1193	No
122	ZNF385	450176 4810358	15514	-0.092	-0.1183	No
123	SCAMP5	5550368 6290021	15724	-0.112	-0.1268	No
124	FMO5	4810725 5390086	15777	-0.119	-0.1266	No
125	ESRRA	6550242	16407	-0.211	-0.1553	No
126	LAT	3170025	16412	-0.213	-0.1501	No
127	EYA3	1580195 6510632	16438	-0.218	-0.1460	No
128	AMPH	2260338 3140576	16468	-0.223	-0.1419	No
129	TMOD4	2360021 4590722 5910520	16540	-0.236	-0.1397	No
130	COL7A1	1230168 2190072	16613	-0.250	-0.1373	No
131	ADRBK1	1340333	16790	-0.283	-0.1397	No
132	MESDC1	2030019	16939	-0.321	-0.1396	No
133	EMP3	1500722 1570039	16956	-0.325	-0.1323	No
134	PTPN7	3450110	17336	-0.473	-0.1408	No
135	LCK	3360142	17374	-0.493	-0.1304	No
136	RAB27A	450019	17437	-0.517	-0.1207	No
137	GATA3	6130068	17582	-0.581	-0.1138	No
138	BACH1	290195	17652	-0.618	-0.1019	No
139	RUNX1	3840711	17925	-0.807	-0.0962	No
140	ARHGAP24	540278 4540025	17942	-0.821	-0.0763	No
141	KLF13	4670563	18239	-1.228	-0.0613	No
142	HSD11B1	450066 5550408	18314	-1.402	-0.0299	No
143	BCL11B	2680673	18435	-1.828	0.0098	No