Details for gene set TTGCACT,MIR-130A,MIR-301,MIR-130B[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy.phenotype_wtNotch_versus_normalThy.cls #wtNotch_versus_normalThy_repos
Phenotype	phenotype_wtNotch_versus_normalThy.cls#wtNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TTGCACT,MIR-130A,MIR-301,MIR-130B
Enrichment Score (ES)	-0.573116
Normalized Enrichment Score (NES)	-1.5253388
Nominal p-value	0.0
FDR q-value	0.1394785
FWER p-Value	0.686

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DPYSL2	2100427 3130112 5700324	166	1.977	0.0181	No
2	TGFBR2	1780711 1980537 6550398	172	1.954	0.0447	No
3	CNOT7	2450338 5720397	193	1.856	0.0690	No
4	RAB34	770411	466	1.162	0.0702	No
5	CUL3	1850520	579	1.029	0.0782	No
6	INHBB	2680092	661	0.950	0.0869	No
7	SKP1A	2450102	805	0.852	0.0908	No
8	MBNL1	2640762 7100048	822	0.837	0.1014	No
9	ARHGAP21	2100168	865	0.802	0.1101	No
10	ABCB7	4150324	1022	0.672	0.1108	No
11	MID1IP1	2570739	1272	0.549	0.1048	No
12	YTHDF2	4060332 4610279	1346	0.519	0.1080	No
13	CHST1	50601	1499	0.457	0.1060	No
14	CYLD	6590079	1543	0.439	0.1096	No
15	SFMBT1	2360450 2370070	1577	0.432	0.1138	No
16	SNX2	2470068 3360364 6510064	1636	0.411	0.1163	No
17	SMOC2	1170170	1670	0.399	0.1199	No
18	RASSF1	2760364 4850725	2004	0.307	0.1060	No
19	HABP4	840487	2118	0.279	0.1037	No
20	SUV39H1	630112	2431	0.212	0.0896	No
21	BLCAP	3990253	2583	0.183	0.0839	No
22	MIB1	3800537	2730	0.161	0.0782	No
23	TIMP2	4780609	2754	0.158	0.0791	No
24	TPP1	3990446	2990	0.131	0.0681	No
25	RUNX3	3800546	3117	0.119	0.0628	No
26	TRPS1	870100	3123	0.118	0.0642	No
27	ACSL1	2900520	3195	0.112	0.0619	No
28	NME7	60170 1230551 2850333 4200102 4560411 5090647	3405	0.092	0.0517	No
29	EDA	6420441	3439	0.090	0.0512	No
30	SPG20	3360202	3470	0.087	0.0507	No
31	SNPH	2680484	3475	0.087	0.0517	No
32	ERBB2IP	580253 1090672	3517	0.084	0.0506	No
33	SPATA2	1230215 5910541	3542	0.082	0.0505	No
34	UBE2D2	4590671 6510446	3650	0.074	0.0456	No
35	TSC1	1850672	3660	0.073	0.0462	No
36	EPC2	2470095	3678	0.072	0.0462	No
37	RUNX2	1400193 4230215	3699	0.070	0.0461	No
38	BRWD1	3130048 3140168 6400601	3702	0.070	0.0470	No
39	PRKD3	5220520 5890519	3719	0.069	0.0470	No
40	STC1	360161	3750	0.067	0.0463	No
41	RAP2C	1690132	3929	0.058	0.0374	No
42	TARDBP	870390 2350093	4036	0.052	0.0324	No
43	ARRDC3	4610390	4077	0.051	0.0309	No
44	ITPK1	3360056	4106	0.049	0.0300	No
45	FASTK	2690053 4280288 4610551 6370292	4128	0.049	0.0296	No
46	LDLR	5670386	4258	0.044	0.0231	No
47	ACSL4	510020 1240041 3190050 4540500 5570463	4397	0.040	0.0162	No
48	CD69	380167 4730088	4401	0.040	0.0166	No
49	NPAT	3800594 4670026	4533	0.037	0.0099	No
50	SOCS5	3830398 7100093	4649	0.034	0.0041	No
51	EIF2C1	6900551	4693	0.033	0.0022	No
52	ATRX	2340039 3610132 4210373	4867	0.030	-0.0068	No
53	SOX21	1050110 4670041 6660338	4877	0.030	-0.0068	No
54	ARID4B	730754 6660026	4881	0.030	-0.0066	No
55	RASD1	2450463	4914	0.029	-0.0079	No
56	NRBF2	6110672	5000	0.027	-0.0122	No
57	PDGFRA	2940332	5037	0.027	-0.0138	No
58	QKI	5220093 6130044	5061	0.027	-0.0147	No
59	UCP3	4200128 4210148	5220	0.024	-0.0230	No
60	NEUROD1	3060619	5313	0.023	-0.0277	No
61	TESK2	6520524	5352	0.023	-0.0294	No
62	TRIM3	5570156	5397	0.022	-0.0315	No
63	HOXA3	3610632 6020358	5425	0.022	-0.0327	No
64	ESR1	4060372 5860193	5448	0.022	-0.0336	No
65	EIF2C4	2940577 5900563	5470	0.021	-0.0344	No
66	HOXB3	520292	5473	0.021	-0.0342	No
67	PLCB1	2570050 7100102	5484	0.021	-0.0345	No
68	FSTL5	770280	5515	0.021	-0.0358	No
69	ROBO2	450136	5592	0.020	-0.0397	No
70	WNT1	4780148	5605	0.020	-0.0401	No
71	RXRA	3800471	5735	0.019	-0.0469	No
72	CLTC	6590458	5772	0.018	-0.0486	No
73	PTPRG	2650524 1340022	5834	0.018	-0.0516	No
74	LRCH2	2900162	5877	0.017	-0.0537	No
75	CLOCK	1410070 2940292 3390075	5935	0.017	-0.0566	No
76	SULF1	430575	5945	0.017	-0.0568	No
77	NRP2	4070400 5860041 6650446	6000	0.016	-0.0596	No
78	USP33	780047	6047	0.016	-0.0618	No
79	HIVEP2	6520538	6148	0.015	-0.0671	No
80	PTPRM	6370136	6248	0.014	-0.0723	No
81	MAMDC1	3710129 4480075	6381	0.013	-0.0793	No
82	MLLT6	3870168	6398	0.013	-0.0800	No
83	BMPR2	5340066 6960328	6433	0.013	-0.0817	No
84	PTGFRN	4120524	6602	0.012	-0.0906	No
85	PRKAA1	510156	6608	0.012	-0.0908	No
86	ST8SIA3	6940427	6824	0.011	-0.1023	No
87	SCRT1	6760736	6833	0.011	-0.1026	No
88	DOCK3	3290273 3360497 2850068	6851	0.010	-0.1034	No
89	MAP3K9	3290707	6902	0.010	-0.1060	No
90	GDA	3290435	6913	0.010	-0.1064	No
91	ZNF3	1770193 2320047 2570273	6922	0.010	-0.1067	No
92	NHLH2	6200021	6946	0.010	-0.1078	No
93	EXOC5	7000711	7051	0.010	-0.1133	No
94	ZBTB4	6450441	7059	0.009	-0.1136	No
95	MAPRE3	7050504	7064	0.009	-0.1137	No
96	ASXL2	130670	7209	0.009	-0.1214	No
97	WDFY3	3610041 4560333 4570273	7235	0.009	-0.1226	No
98	RTN1	4150452 4850176	7339	0.008	-0.1281	No
99	AP1G1	2360671	7414	0.008	-0.1321	No
100	SLMAP	3120093 4760128 5390528	7739	0.007	-0.1496	No
101	EFNB2	5340136	7824	0.006	-0.1541	No
102	ARHGEF12	3990195	7948	0.006	-0.1607	No
103	ATRN	870735 3360390	8005	0.006	-0.1637	No
104	PLAA	60706 6370369	8028	0.006	-0.1648	No
105	EMX2	1660092	8041	0.005	-0.1654	No
106	ARHGAP12	1050181	8231	0.005	-0.1756	No
107	WDR20	1240373	8368	0.004	-0.1830	No
108	STARD13	540722	8398	0.004	-0.1845	No
109	CSF1	3120400	8407	0.004	-0.1849	No
110	ATP2B2	3780397	8446	0.004	-0.1869	No
111	PTP4A1	130692	8504	0.004	-0.1900	No
112	NEUROG1	380341	8583	0.004	-0.1942	No
113	ST18	5720537	8669	0.003	-0.1987	No
114	MYT1	6770524	8692	0.003	-0.1999	No
115	SHANK2	1500452	8693	0.003	-0.1998	No
116	BHLHB3	3450438	8705	0.003	-0.2004	No
117	PPARG	1990168 2680603 6130632	8795	0.003	-0.2052	No
118	NR3C2	2480324 6400093	8916	0.002	-0.2117	No
119	ZFPM2	460072	9005	0.002	-0.2165	No
120	TAF4	1450170	9006	0.002	-0.2165	No
121	AKAP1	110148 1740735 2260019 7000563	9168	0.002	-0.2252	No
122	GAP43	3130504	9391	0.001	-0.2373	No
123	MEOX2	6400288	9397	0.001	-0.2375	No
124	ADAMTS18	5690008	9409	0.001	-0.2381	No
125	SNX5	1570021 6860609	9427	0.001	-0.2390	No
126	BTBD3	1980041 2510577 3190053 4200746	9536	0.000	-0.2449	No
127	ACVR1	6840671	9671	0.000	-0.2522	No
128	SLC9A2	4920022 5910133	9772	-0.000	-0.2577	No
129	LRP8	3610746 5360035	9894	-0.001	-0.2643	No
130	TRIM2	430546 1170286	10027	-0.001	-0.2714	No
131	RAI2	6770333	10055	-0.001	-0.2729	No
132	RAPGEF4	6100563	10115	-0.001	-0.2761	No
133	ATP11A	1240717 5570603	10213	-0.002	-0.2813	No
134	CANX	4760402	10215	-0.002	-0.2814	No
135	DCBLD2	5890333	10229	-0.002	-0.2821	No
136	BIRC6	70148	10238	-0.002	-0.2825	No
137	BTBD7	730288	10253	-0.002	-0.2832	No
138	WNK3	4060053	10422	-0.002	-0.2923	No
139	UBE2D1	1850400	10639	-0.003	-0.3041	No
140	COL19A1	6220441	10646	-0.003	-0.3044	No
141	EDG1	4200619	10690	-0.003	-0.3067	No
142	PAFAH1B1	4230333 6420121 6450066	10752	-0.003	-0.3099	No
143	ABCA1	6290156	10872	-0.004	-0.3164	No
144	MAP3K12	2470373 6420162	10931	-0.004	-0.3195	No
145	ABHD3	2370091	10942	-0.004	-0.3200	No
146	EREG	50519 4920129	10966	-0.004	-0.3212	No
147	MAFB	1230471	11001	-0.004	-0.3230	No
148	CLCN5	4200390	11441	-0.006	-0.3468	No
149	FMR1	5050075	11484	-0.006	-0.3490	No
150	CREB5	2320368	11672	-0.006	-0.3591	No
151	ZCCHC14	5900288	11800	-0.007	-0.3659	No
152	AKAP7	4610044	12145	-0.009	-0.3846	No
153	M6PR	2480458 3290593 3840324	12240	-0.009	-0.3896	No
154	HOXA5	6840026	12264	-0.009	-0.3907	No
155	B4GALT5	1230692	12287	-0.009	-0.3918	No
156	CSMD1	1780672	12352	-0.010	-0.3951	No
157	POU3F2	6620484	12354	-0.010	-0.3950	No
158	PHACTR2	1580154	12454	-0.010	-0.4003	No
159	FOXF2	1240091	12627	-0.011	-0.4095	No
160	ROBO1	3710398	12858	-0.013	-0.4219	No
161	POU4F1	2260315	12873	-0.013	-0.4225	No
162	PGM2L1	2350035	12965	-0.013	-0.4272	No
163	WEE1	3390070	13018	-0.014	-0.4299	No
164	ADCY2	4610100	13025	-0.014	-0.4300	No
165	SNAP25	360520	13148	-0.015	-0.4365	No
166	ZFYVE9	6980288 7100017	13163	-0.015	-0.4370	No
167	RAB5A	6520324	13175	-0.015	-0.4374	No
168	TBC1D8	2340253	13310	-0.016	-0.4445	No
169	NPTX1	3710736	13341	-0.017	-0.4459	No
170	ERBB4	4610400 4810017	13431	-0.017	-0.4505	No
171	DLL1	1770377	13591	-0.019	-0.4589	No
172	SLC24A3	5080707	13596	-0.019	-0.4589	No
173	R3HDM1	940685 3290161	13734	-0.021	-0.4660	No
174	GRM7	4230110	13755	-0.021	-0.4668	No
175	CSNK1G1	840082 1230575 3940647	13858	-0.023	-0.4721	No
176	SASH1	4070270	13871	-0.023	-0.4724	No
177	LRP4	1740253	13940	-0.024	-0.4758	No
178	MAT2B	1690139 2510706	14156	-0.028	-0.4871	No
179	CNOT4	2320242 6760706	14178	-0.028	-0.4879	No
180	SOX5	2370576 2900167 3190128 5050528	14297	-0.031	-0.4939	No
181	MLLT10	1410288 3290142	14494	-0.035	-0.5041	No
182	LNPEP	1170092 1940093 3120025	14564	-0.037	-0.5073	No
183	SH3D19	6020520	14576	-0.038	-0.5074	No
184	TNRC6A	1240537 6130037 6200010	14620	-0.039	-0.5092	No
185	ABCC5	2100600 5050692	14657	-0.040	-0.5106	No
186	ARFIP1	3130601	14664	-0.040	-0.5104	No
187	SOCS6	1170347 7100280	14685	-0.041	-0.5109	No
188	NIPA1	380600	14728	-0.043	-0.5126	No
189	DNM2	50176 3170279	14850	-0.048	-0.5185	No
190	WNT2B	3130088 5960575	15115	-0.061	-0.5321	No
191	ARHGAP1	2810010 5270064	15174	-0.065	-0.5344	No
192	ADAM12	3390132 4070347	15187	-0.066	-0.5341	No
193	CHD9	430037 2570129 5420398	15220	-0.068	-0.5349	No
194	SNF1LK	6110403	15372	-0.078	-0.5421	No
195	PIGA	1940435 5290692	15416	-0.082	-0.5433	No
196	PAPD4	1580673 730605 5270112	15458	-0.087	-0.5443	No
197	NPNT	130301	15470	-0.089	-0.5437	No
198	OGT	2360131 4610333	15629	-0.102	-0.5509	No
199	SMAD5	5700497	15682	-0.108	-0.5523	No
200	RKHD1	6860577	15745	-0.114	-0.5541	No
201	E2F7	4200056	15752	-0.115	-0.5528	No
202	RNF38	1940746 3140133 3840601	15787	-0.120	-0.5530	No
203	ACBD5	3440397 6020600	15790	-0.121	-0.5515	No
204	IRF1	2340152 3450592 6290121 6980577	15795	-0.121	-0.5500	No
205	TMEM32	1170452	16008	-0.149	-0.5595	No
206	CALM2	6620463	16048	-0.154	-0.5596	No
207	MTF1	520427 2340364	16086	-0.160	-0.5594	No
208	RAB5B	130397 1980273 6900731	16133	-0.168	-0.5596	No
209	CCRN4L	50438 5130372	16197	-0.177	-0.5606	No
210	RHOT1	6760692	16211	-0.178	-0.5588	No
211	TMEPAI	1340253	16286	-0.189	-0.5603	No
212	DICER1	540286	16382	-0.206	-0.5626	No
213	PFKFB3	630706	16409	-0.212	-0.5611	No
214	MECP2	1940450	16526	-0.233	-0.5642	No
215	ATXN1	5550156	16576	-0.244	-0.5636	No
216	TTYH3	2100082	16659	-0.258	-0.5645	No
217	KIT	7040095	16733	-0.270	-0.5648	No
218	ULK2	50041 5050176	16764	-0.277	-0.5626	No
219	VPS24	3120687	16858	-0.303	-0.5635	No
220	SMARCD2	3830619	16926	-0.318	-0.5628	No
221	USP48	2480010	16980	-0.335	-0.5611	No
222	BAZ2A	730184	17202	-0.414	-0.5674	Yes
223	DDX6	2630025 6770408	17219	-0.421	-0.5625	Yes
224	EPS15	4200215	17238	-0.428	-0.5576	Yes
225	SNIP1	5360092	17258	-0.436	-0.5527	Yes
226	BZRAP1	5290487	17289	-0.448	-0.5482	Yes
227	HRB	1660397 6110398	17302	-0.455	-0.5426	Yes
228	ENPP5	1780338	17312	-0.459	-0.5368	Yes
229	HECA	3310612	17359	-0.484	-0.5326	Yes
230	VGLL4	6860463	17370	-0.492	-0.5264	Yes
231	MAP3K14	5890435	17378	-0.493	-0.5200	Yes
232	MYB	1660494 5860451 6130706	17459	-0.526	-0.5171	Yes
233	RALBP1	4780632	17534	-0.560	-0.5135	Yes
234	STX6	4850750 6770278	17619	-0.600	-0.5098	Yes
235	MTMR12	7000181	17658	-0.622	-0.5033	Yes
236	PITPNM2	1580044	17720	-0.654	-0.4977	Yes
237	PHF12	870400 3130687	17745	-0.678	-0.4897	Yes
238	SOX4	2260091	17765	-0.693	-0.4812	Yes
239	ATG16L1	5390292	17796	-0.714	-0.4730	Yes
240	GJA1	5220731	17809	-0.725	-0.4637	Yes
241	NCOA1	3610438	17841	-0.745	-0.4552	Yes
242	ATP6V1B2	4060528	17882	-0.776	-0.4467	Yes
243	BACH2	6760131	17923	-0.805	-0.4378	Yes
244	ZFYVE26	6860152	18008	-0.888	-0.4302	Yes
245	PELI1	3870215 6900040	18018	-0.899	-0.4184	Yes
246	SPEN	2060041	18034	-0.923	-0.4065	Yes
247	GADD45A	2900717	18099	-1.001	-0.3962	Yes
248	PSAP	2810338	18152	-1.065	-0.3845	Yes
249	NDEL1	2370465	18159	-1.077	-0.3700	Yes
250	KLF13	4670563	18239	-1.228	-0.3574	Yes
251	ITPR1	3450519	18312	-1.399	-0.3421	Yes
252	MAML1	2760008	18333	-1.456	-0.3232	Yes
253	HBP1	2510102 3130010 4210619	18428	-1.800	-0.3036	Yes
254	SPHK2	2030487 4120670 4850114	18429	-1.804	-0.2789	Yes
255	WDR1	1090129 3990121	18431	-1.805	-0.2541	Yes
256	FBXO28	1340358 4730100	18452	-1.931	-0.2287	Yes
257	CNIH	2190484 5080609	18535	-2.597	-0.1975	Yes
258	ELK3	460377 1400762 3710497	18557	-2.767	-0.1607	Yes
259	LRIG1	1050136	18565	-2.925	-0.1209	Yes
260	SMOC1	840039	18607	-4.125	-0.0665	Yes
261	BTG1	4200735 6040131 6200133	18610	-4.873	0.0003	Yes