Dataset | Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch |
Phenotype | phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch |
Upregulated in class | wtNotch |
GeneSet | POSITIVE_REGULATION_OF_RNA_METABOLIC_PROCESS |
Enrichment Score (ES) | -0.6766078 |
Normalized Enrichment Score (NES) | -1.6761152 |
Nominal p-value | 0.0025188916 |
FDR q-value | 0.12045273 |
FWER p-Value | 0.456 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | ERCC2 | 2360750 4060390 6550138 | 470 | 0.657 | -0.0018 | No | ||
2 | SMAD3 | 6450671 | 532 | 0.607 | 0.0168 | No | ||
3 | SQSTM1 | 6550056 | 1025 | 0.393 | 0.0044 | No | ||
4 | HMGA1 | 6580408 | 1226 | 0.349 | 0.0061 | No | ||
5 | SCAP | 3800706 | 1230 | 0.349 | 0.0185 | No | ||
6 | SMARCD1 | 3060193 3850184 6400369 | 1240 | 0.347 | 0.0305 | No | ||
7 | SUPT4H1 | 6200056 | 1313 | 0.332 | 0.0385 | No | ||
8 | RBM14 | 5340731 5690315 | 1486 | 0.297 | 0.0399 | No | ||
9 | MRPL12 | 3120112 | 1636 | 0.270 | 0.0416 | No | ||
10 | EPC1 | 1570050 5290095 6900193 | 2078 | 0.205 | 0.0251 | No | ||
11 | TRIM28 | 380292 | 2399 | 0.165 | 0.0138 | No | ||
12 | TGFB1 | 1940162 | 2566 | 0.146 | 0.0101 | No | ||
13 | SUPT5H | 4150546 | 2670 | 0.135 | 0.0094 | No | ||
14 | SPI1 | 1410397 | 2778 | 0.125 | 0.0081 | No | ||
15 | EPAS1 | 5290156 | 3250 | 0.090 | -0.0141 | No | ||
16 | DYRK1B | 5860706 | 3519 | 0.076 | -0.0258 | No | ||
17 | TP53 | 6130707 | 3540 | 0.075 | -0.0242 | No | ||
18 | SMARCD3 | 4070497 | 3998 | 0.058 | -0.0468 | No | ||
19 | HNF4A | 6620440 | 4142 | 0.053 | -0.0526 | No | ||
20 | ELL3 | 1770484 | 4241 | 0.050 | -0.0561 | No | ||
21 | GLI2 | 3060632 | 4406 | 0.046 | -0.0633 | No | ||
22 | PLAGL1 | 3190082 6200193 | 4597 | 0.041 | -0.0721 | No | ||
23 | FOXO3 | 2510484 4480451 | 4783 | 0.038 | -0.0807 | No | ||
24 | THRAP3 | 6180309 | 4835 | 0.037 | -0.0821 | No | ||
25 | CITED2 | 5670114 5130088 | 4868 | 0.036 | -0.0826 | No | ||
26 | MAP2K3 | 5570193 | 5082 | 0.032 | -0.0929 | No | ||
27 | FOXE1 | 4810164 | 5098 | 0.032 | -0.0926 | No | ||
28 | CREB5 | 2320368 | 5656 | 0.024 | -0.1217 | No | ||
29 | UTF1 | 5700593 | 5824 | 0.023 | -0.1299 | No | ||
30 | IL4 | 6020537 | 6057 | 0.020 | -0.1417 | No | ||
31 | TBX5 | 2900132 6370484 | 6316 | 0.018 | -0.1550 | No | ||
32 | NUFIP1 | 6350241 | 6390 | 0.017 | -0.1583 | No | ||
33 | CDK7 | 2640451 | 7752 | 0.009 | -0.2314 | No | ||
34 | NPAS2 | 770670 | 7804 | 0.009 | -0.2339 | No | ||
35 | RORB | 6400035 | 7857 | 0.009 | -0.2363 | No | ||
36 | MKL2 | 5700204 | 8056 | 0.008 | -0.2467 | No | ||
37 | NRIP1 | 3190039 | 8083 | 0.008 | -0.2478 | No | ||
38 | FOXF2 | 1240091 | 8114 | 0.008 | -0.2492 | No | ||
39 | GATA4 | 1410215 2690609 | 8594 | 0.006 | -0.2748 | No | ||
40 | HIF1A | 5670605 | 8842 | 0.005 | -0.2879 | No | ||
41 | ESRRG | 4010181 | 9935 | 0.002 | -0.3468 | No | ||
42 | EHF | 4560088 | 9976 | 0.002 | -0.3489 | No | ||
43 | SMARCA1 | 4230315 | 10479 | 0.001 | -0.3759 | No | ||
44 | BMP6 | 2100128 | 11286 | -0.002 | -0.4194 | No | ||
45 | NCOA6 | 1780333 6450110 | 11459 | -0.002 | -0.4286 | No | ||
46 | GLI1 | 4560176 | 11972 | -0.004 | -0.4561 | No | ||
47 | FOXD3 | 6550156 | 12005 | -0.004 | -0.4577 | No | ||
48 | FOXH1 | 2060180 | 12354 | -0.005 | -0.4763 | No | ||
49 | PAX8 | 5050301 5290164 | 13741 | -0.014 | -0.5506 | No | ||
50 | BPTF | 940541 4540152 | 14159 | -0.019 | -0.5724 | No | ||
51 | CLOCK | 1410070 2940292 3390075 | 14298 | -0.021 | -0.5791 | No | ||
52 | RXRA | 3800471 | 14505 | -0.024 | -0.5894 | No | ||
53 | TCF3 | 5080022 | 14733 | -0.029 | -0.6006 | No | ||
54 | NOTCH4 | 2450040 6370707 | 14957 | -0.035 | -0.6113 | No | ||
55 | GLIS1 | 840471 | 15182 | -0.045 | -0.6218 | No | ||
56 | ELF4 | 4850193 | 15444 | -0.057 | -0.6338 | No | ||
57 | NARG1 | 5910563 6350095 | 15804 | -0.081 | -0.6503 | No | ||
58 | BCL10 | 2360397 | 15829 | -0.083 | -0.6486 | No | ||
59 | TRERF1 | 6370017 6940138 | 15841 | -0.084 | -0.6462 | No | ||
60 | ERCC3 | 6900008 | 15992 | -0.095 | -0.6508 | No | ||
61 | NSD1 | 4560519 4780672 | 16074 | -0.102 | -0.6515 | No | ||
62 | PPARGC1B | 3290114 | 16512 | -0.152 | -0.6697 | No | ||
63 | MYO6 | 2190332 | 16625 | -0.169 | -0.6696 | No | ||
64 | MED6 | 6840500 | 16755 | -0.187 | -0.6699 | Yes | ||
65 | SP1 | 6590017 | 16838 | -0.205 | -0.6669 | Yes | ||
66 | ARNTL | 3170463 | 16863 | -0.209 | -0.6607 | Yes | ||
67 | PHF5A | 2690519 | 16977 | -0.228 | -0.6586 | Yes | ||
68 | TNFRSF1A | 1090390 6520735 | 17180 | -0.268 | -0.6599 | Yes | ||
69 | ILF2 | 2900253 | 17184 | -0.270 | -0.6504 | Yes | ||
70 | SMAD2 | 4200592 | 17271 | -0.295 | -0.6444 | Yes | ||
71 | MNAT1 | 730292 2350364 | 17289 | -0.300 | -0.6346 | Yes | ||
72 | TCF4 | 520021 | 17388 | -0.328 | -0.6281 | Yes | ||
73 | HNRPAB | 540504 | 17390 | -0.328 | -0.6163 | Yes | ||
74 | MAML1 | 2760008 | 17520 | -0.360 | -0.6104 | Yes | ||
75 | GTF2H1 | 2570746 2650148 | 17587 | -0.381 | -0.6002 | Yes | ||
76 | MED12 | 4920095 | 17715 | -0.430 | -0.5916 | Yes | ||
77 | RSF1 | 1580097 | 17746 | -0.443 | -0.5773 | Yes | ||
78 | RUNX1 | 3840711 | 18014 | -0.563 | -0.5714 | Yes | ||
79 | ARHGEF11 | 1780288 | 18092 | -0.610 | -0.5537 | Yes | ||
80 | CCNH | 3190347 | 18256 | -0.727 | -0.5364 | Yes | ||
81 | ATF7IP | 2690176 6770021 | 18287 | -0.759 | -0.5107 | Yes | ||
82 | SMARCC1 | 5080019 7100047 | 18369 | -0.848 | -0.4846 | Yes | ||
83 | XRCC6 | 2850450 3870528 | 18427 | -0.927 | -0.4543 | Yes | ||
84 | CTCF | 5340017 | 18434 | -0.936 | -0.4210 | Yes | ||
85 | ELF1 | 4780450 | 18546 | -1.372 | -0.3777 | Yes | ||
86 | ILF3 | 940722 3190647 6520110 | 18599 | -2.087 | -0.3055 | Yes | ||
87 | ATF4 | 730441 1740195 | 18600 | -2.197 | -0.2266 | Yes | ||
88 | ARID1A | 2630022 1690551 4810110 | 18616 | -6.327 | 0.0000 | Yes |