Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	0.6901052
Normalized Enrichment Score (NES)	1.7156386
Nominal p-value	0.0
FDR q-value	0.22172381
FWER p-Value	0.216

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NDRG2	450403	104	1.446	0.0931	Yes
2	CPT2	3940504 6180075	129	1.246	0.1768	Yes
3	C2	5390465	378	0.760	0.2153	Yes
4	DCXR	4730551	431	0.689	0.2595	Yes
5	CRYL1	1340427	465	0.660	0.3028	Yes
6	ACADS	110746	471	0.657	0.3474	Yes
7	PINK1	380044 580577	609	0.554	0.3778	Yes
8	KHK	1090204 3870204	909	0.430	0.3910	Yes
9	SLC25A10	1400609	961	0.415	0.4165	Yes
10	SERPING1	5550440	966	0.414	0.4446	Yes
11	EPHX1	1740136	1108	0.371	0.4623	Yes
12	EGLN2	540086	1155	0.361	0.4844	Yes
13	SELENBP1	3850575	1242	0.346	0.5034	Yes
14	SERPINF1	7040367	1282	0.338	0.5244	Yes
15	PCCB	50670	1288	0.337	0.5471	Yes
16	ALDH4A1	2450450	1356	0.324	0.5656	Yes
17	ABHD6	630717	1357	0.324	0.5877	Yes
18	SLC35D1	1740520	1442	0.305	0.6040	Yes
19	C1QTNF4	60619	1488	0.297	0.6218	Yes
20	MAP4K1	4060692	1489	0.297	0.6421	Yes
21	NDUFS2	4850020 6200402	1511	0.292	0.6609	Yes
22	ENPP5	1780338	1685	0.263	0.6695	Yes
23	ECHS1	2970184	1835	0.240	0.6778	Yes
24	MVK	1450717	2142	0.197	0.6747	Yes
25	ACOX2	450017	2216	0.188	0.6836	Yes
26	PCYT2	2630092 4590278	2380	0.166	0.6861	Yes
27	MASP2	360110	2499	0.152	0.6901	Yes
28	IVD	2510673	2732	0.129	0.6864	No
29	G6PC	430093	2831	0.120	0.6893	No
30	PPAP2A	1170397 3440288 3930270	3348	0.085	0.6672	No
31	HAGH	540358	3457	0.079	0.6667	No
32	INSR	1190504	3660	0.070	0.6606	No
33	F12	1090215 3520736	3838	0.063	0.6553	No
34	SLC38A3	5340142	3963	0.059	0.6526	No
35	CRAT	540020 2060364 3520148	4138	0.053	0.6468	No
36	GLYAT	6200239	4165	0.052	0.6490	No
37	INSIG1	1500332 3450458 4540301	4248	0.050	0.6479	No
38	AMT	3180450	4315	0.048	0.6476	No
39	RDH5	2970736 3940632 5340730 6370093 4610059	4914	0.035	0.6177	No
40	VPREB1	3520280	4970	0.034	0.6171	No
41	CPN2	6590291	5051	0.033	0.6150	No
42	MSRA	4570411	5256	0.030	0.6060	No
43	GJB1	1240441	5495	0.026	0.5950	No
44	PRDX6	4920397 6380601	5682	0.024	0.5866	No
45	SERPIND1	6110059	5847	0.022	0.5792	No
46	ABCG8	4780605	6021	0.021	0.5713	No
47	SGPL1	4480059	6059	0.020	0.5707	No
48	ABCC2	380202 5390300	6137	0.020	0.5678	No
49	RGN	6200095	6388	0.017	0.5555	No
50	ZP3	4060767	6849	0.014	0.5316	No
51	CPB2	4150167 6100333 6590735	6955	0.013	0.5269	No
52	AQP9	2650047	7087	0.013	0.5206	No
53	ABCA6	130538 1050706	7220	0.012	0.5143	No
54	KLK3	1500278	7363	0.011	0.5074	No
55	MUCDHL	5720056	7416	0.011	0.5054	No
56	F13B	6220278	7790	0.009	0.4858	No
57	DPYS	3130670	7991	0.009	0.4756	No
58	OTC	1740494	8266	0.007	0.4613	No
59	HAO1	7050093	8329	0.007	0.4585	No
60	MPDZ	130026 1990064 4050577	8606	0.006	0.4440	No
61	LPIN1	1770358 3120059	8683	0.006	0.4403	No
62	AMACR	780215	8733	0.006	0.4380	No
63	CDO1	2480279	8838	0.005	0.4328	No
64	UGT1A6	4610368 6900086 4540092 2630075	8885	0.005	0.4306	No
65	APCS	2060500	8976	0.005	0.4261	No
66	SERPINC1	1780717	9119	0.005	0.4187	No
67	APOC3	2030168	9305	0.004	0.4090	No
68	CES2	5340609	9395	0.004	0.4045	No
69	SLC6A12	3170685	9668	0.003	0.3900	No
70	RHBG	2810736	9680	0.003	0.3896	No
71	NF1	6980433	9709	0.003	0.3883	No
72	AOX1	110082 6290450	9720	0.003	0.3879	No
73	FMO3	2480369	9898	0.002	0.3785	No
74	TTPA	630576	9957	0.002	0.3755	No
75	ANXA9	1190195	10000	0.002	0.3734	No
76	PKLR	1170400 2470114	10072	0.002	0.3697	No
77	TTBK1	60605 1850722	10139	0.002	0.3662	No
78	ITIH1	670044	10488	0.001	0.3475	No
79	CUTL2	2940692 6220687	10490	0.001	0.3475	No
80	PCK1	7000358	10496	0.001	0.3472	No
81	APOA5	6130471	10717	0.000	0.3353	No
82	PAH	3800309	10759	-0.000	0.3331	No
83	PIPOX	70750	10809	-0.000	0.3305	No
84	ABCG5	2810670	11033	-0.001	0.3185	No
85	SULT2A1	2650286	11066	-0.001	0.3168	No
86	BAAT	730739	11098	-0.001	0.3152	No
87	MST1	1400403	11191	-0.001	0.3104	No
88	SALL1	5420020 7050195	11659	-0.003	0.2853	No
89	HYAL1	3850341	12041	-0.004	0.2650	No
90	CABIN1	6900446	12169	-0.005	0.2584	No
91	HPD	3120519	12284	-0.005	0.2526	No
92	CES1	1400494	12402	-0.005	0.2467	No
93	SLC2A2	5130537 5720722 6770079	12434	-0.006	0.2454	No
94	MYRIP	1580471	12467	-0.006	0.2440	No
95	CES3	5050167 3290458	12485	-0.006	0.2435	No
96	ASGR1	1850088	12509	-0.006	0.2427	No
97	MTSS1	780435 2370114	12551	-0.006	0.2409	No
98	DIO1	4570279 5290112 5420148	13373	-0.011	0.1972	No
99	HGD	460390	13395	-0.011	0.1968	No
100	WNT11	1230278	13640	-0.013	0.1845	No
101	SLC27A5	2850717	14747	-0.030	0.1268	No
102	EHHADH	6200315	15139	-0.043	0.1086	No
103	IL6R	520706 3800215	15405	-0.055	0.0980	No
104	AR	6380167	15424	-0.056	0.1008	No
105	ITPR2	5360128	15705	-0.074	0.0907	No
106	MRPL46	360736	16102	-0.104	0.0765	No
107	SEC14L2	2640370	16164	-0.111	0.0807	No
108	F10	3830450	16195	-0.113	0.0869	No
109	AMFR	2810041	16291	-0.124	0.0901	No
110	ALAS1	6400440	16292	-0.124	0.0986	No
111	SRD5A1	5910347	16304	-0.125	0.1065	No
112	SPINK2	3990093	16368	-0.133	0.1122	No
113	STARD10	1400619 4570170	16395	-0.135	0.1200	No