Details for gene set EMT

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_wtNotch.phenotype_truncNotch_versus_wtNotch.cls #truncNotch_versus_wtNotch
Phenotype	phenotype_truncNotch_versus_wtNotch.cls#truncNotch_versus_wtNotch
Upregulated in class	truncNotch
GeneSet	EMT_UP
Enrichment Score (ES)	0.7238764
Normalized Enrichment Score (NES)	1.6366903
Nominal p-value	0.0035650623
FDR q-value	0.15622649
FWER p-Value	0.789

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	S100A8	70112	85	1.547	0.1529	Yes
2	ADSSL1	4850132 7000288	230	0.987	0.2456	Yes
3	IFITM3	2340358	272	0.930	0.3381	Yes
4	SLPI	2120446	404	0.723	0.4047	Yes
5	ISG15	3170093	549	0.597	0.4577	Yes
6	CD68	6350450	575	0.578	0.5152	Yes
7	PHGDH	1500280	632	0.536	0.5668	Yes
8	PMP22	4010239 6550072	721	0.499	0.6129	Yes
9	SRM	1850097 2480162	879	0.442	0.6494	Yes
10	IRF7	1570605	1645	0.268	0.6355	Yes
11	ADA	2120403 3130075	1808	0.245	0.6517	Yes
12	COL6A2	1780142	2023	0.213	0.6619	Yes
13	RRAS	4150609	2139	0.197	0.6757	Yes
14	MMP2	2570603	2193	0.190	0.6923	Yes
15	GALK1	840162	2227	0.186	0.7095	Yes
16	VIM	20431	2295	0.177	0.7239	Yes
17	ASNS	110368 7100687	2752	0.128	0.7123	No
18	DAB2	60309	2928	0.112	0.7143	No
19	HTRA1	3450601	3129	0.099	0.7136	No
20	CFH	1240053 2030541 5900731	3946	0.059	0.6756	No
21	PCOLCE	4210433	4205	0.051	0.6669	No
22	TNC	670053 1780039 1980020 3060411 4780091 6860433	4234	0.050	0.6705	No
23	SNAI1	6590253	4929	0.035	0.6367	No
24	VLDLR	870722 3060047 5340452 6550131	5018	0.033	0.6353	No
25	MTHFD2	3800411	5145	0.031	0.6317	No
26	CDH2	520435 2450451 2760025 6650477	5382	0.028	0.6219	No
27	SDC2	1980168	5559	0.026	0.6150	No
28	UPP1	3850358 3940100	5624	0.025	0.6141	No
29	PTGS1	730193 1780273 6450195	5635	0.025	0.6161	No
30	CDH15	460014	6476	0.017	0.5725	No
31	CTSZ	1500687 1690364	6748	0.015	0.5594	No
32	FMO1	5360086	6913	0.014	0.5520	No
33	CXCL5	6370333	7999	0.008	0.4944	No
34	B2M	5080332 5130059	8073	0.008	0.4913	No
35	HIF1A	5670605	8842	0.005	0.4505	No
36	CXCR7	2630301	9253	0.004	0.4288	No
37	PDGFRA	2940332	10436	0.001	0.3652	No
38	PROCR	4920687	10764	-0.000	0.3476	No
39	PTPN22	1690647 7100239	11281	-0.002	0.3200	No
40	IFIT3	2450278 3190113 6200113	11515	-0.002	0.3076	No
41	PPIC	4570110	11555	-0.002	0.3058	No
42	IL11	1740398	12421	-0.006	0.2597	No
43	MMP13	510471 3940097	12440	-0.006	0.2593	No
44	GAS1	2120504	12734	-0.007	0.2443	No
45	PLA2G7	4730092	13788	-0.014	0.1890	No
46	SPARC	1690086	13824	-0.015	0.1886	No
47	DDR2	7050273	14118	-0.018	0.1746	No
48	TNXB	630592 3830020 5360497 7000673	14176	-0.019	0.1734	No
49	DCN	510332 5340026 5900711 6550092	14355	-0.022	0.1660	No
50	CYP1B1	4760735	14826	-0.032	0.1440	No
51	MMP12	4920070	14894	-0.034	0.1438	No
52	PDGFRB	6450279	15511	-0.061	0.1168	No
53	SLC3A2	5270358	15876	-0.086	0.1060	No
54	COL6A1	1410670 2940091 6510086	15923	-0.090	0.1127	No
55	STAT1	6510204 6590553	16359	-0.131	0.1025	No
56	BCL3	3990440	16752	-0.187	0.1004	No