Details for gene set SECRETORY

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	SECRETORY_PATHWAY
Enrichment Score (ES)	-0.65929824
Normalized Enrichment Score (NES)	-1.5225092
Nominal p-value	0.0025252525
FDR q-value	0.77427816
FWER p-Value	0.992

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CCL8	3870010	551	1.265	0.0266	No
2	RAB3A	3940288	1406	0.602	0.0074	No
3	NAPA	1780537 5720102	1940	0.418	-0.0027	No
4	ERGIC3	1400075 4780047	2499	0.265	-0.0210	No
5	SNAP23	2480722 5390315	2887	0.183	-0.0338	No
6	SCRN1	6040025 6580019	2972	0.169	-0.0308	No
7	CCL3	2810092	2985	0.168	-0.0239	No
8	COPZ1	6940100	3014	0.164	-0.0182	No
9	SEPT5	460725	3380	0.119	-0.0325	No
10	COPE	2340088 2640450 6620279	3483	0.110	-0.0331	No
11	VTI1B	3140364 6510497	3710	0.092	-0.0412	No
12	NMUR2	1580717	4066	0.073	-0.0571	No
13	ARFGEF1	6760494	4109	0.071	-0.0562	No
14	AKAP3	5890471	4115	0.071	-0.0533	No
15	KIF1C	2480484	4379	0.059	-0.0649	No
16	OPTN	3940041	5269	0.036	-0.1112	No
17	RIMS1	5670022	5901	0.025	-0.1441	No
18	AP3B2	4670605	6031	0.023	-0.1501	No
19	GRM4	6960092	6531	0.018	-0.1761	No
20	VAMP3	7100050	6559	0.018	-0.1768	No
21	LIN7A	4540707 5270369	8147	0.009	-0.2619	No
22	CADPS	2320181	9555	0.004	-0.3376	No
23	BET1	4010725	9934	0.003	-0.3579	No
24	COPB1	5390037	10505	0.001	-0.3885	No
25	EXOC5	7000711	10889	0.000	-0.4092	No
26	SEC22A	3800162 3840168 5220164 5290632	10932	-0.000	-0.4114	No
27	PKDREJ	4200088	11517	-0.002	-0.4428	No
28	STX16	70315	12083	-0.004	-0.4731	No
29	SYN3	3290427	12247	-0.004	-0.4817	No
30	NLGN1	5670278	12288	-0.005	-0.4837	No
31	TXNDC4	450537	12515	-0.006	-0.4956	No
32	CPLX1	2510735	12680	-0.006	-0.5042	No
33	SYT1	840364	12700	-0.006	-0.5049	No
34	CPLX2	6980538	12786	-0.007	-0.5092	No
35	NMUR1	1500403	13099	-0.009	-0.5256	No
36	CARTPT	6660687	13495	-0.012	-0.5464	No
37	SNCAIP	4010551	13539	-0.013	-0.5481	No
38	COG2	5900129	13554	-0.013	-0.5483	No
39	SEC22B	3190278	14030	-0.019	-0.5731	No
40	RPH3AL	70110	14481	-0.031	-0.5959	No
41	SYTL4	3060066	14894	-0.051	-0.6159	No
42	HRH3	6180040	15059	-0.061	-0.6220	No
43	SEC22C	1050600 6760050	15155	-0.068	-0.6241	No
44	LMAN1	3420068	15178	-0.070	-0.6222	No
45	RAB26	5910025	15291	-0.079	-0.6247	No
46	GOSR2	1850059 1980687 4590184	15574	-0.109	-0.6350	No
47	COG7	360133	15689	-0.121	-0.6358	No
48	ARFGEF2	5550500	16126	-0.181	-0.6512	Yes
49	STX18	4760706	16181	-0.193	-0.6456	Yes
50	SCAMP3	2360707	16337	-0.223	-0.6440	Yes
51	TXNDC1	520398	16345	-0.225	-0.6343	Yes
52	COPG2	2370152	16647	-0.306	-0.6369	Yes
53	SCAMP2	430114	16677	-0.314	-0.6245	Yes
54	KCNMB4	3290347	17118	-0.459	-0.6278	Yes
55	GOSR1	730279	17401	-0.579	-0.6173	Yes
56	NRBP1	1740750	17465	-0.617	-0.5932	Yes
57	COG3	3840746	17526	-0.644	-0.5677	Yes
58	COPB2	610154	17883	-0.876	-0.5479	Yes
59	SNAP29	6380239	17910	-0.907	-0.5090	Yes
60	RAB2A	2450358	18105	-1.119	-0.4696	Yes
61	RAB14	6860139	18184	-1.233	-0.4189	Yes
62	SCIN	5420180	18226	-1.318	-0.3624	Yes
63	STX7	5910484	18259	-1.384	-0.3026	Yes
64	ZW10	2900735 3520687	18502	-2.294	-0.2135	Yes
65	LMAN2L	50079 6590100 6650338	18532	-2.438	-0.1065	Yes
66	CCL5	3710397	18540	-2.493	0.0041	Yes