Details for gene set INFLAMMATORY

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	INFLAMMATORY_RESPONSE
Enrichment Score (ES)	-0.59381497
Normalized Enrichment Score (NES)	-1.4880551
Nominal p-value	0.0057306592
FDR q-value	0.60365415
FWER p-Value	0.999

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	2970019	183	2.087	0.0512	No
2	ABCF1	2630707 2760273 3520725	452	1.395	0.0776	No
3	C2	5390465	826	0.971	0.0858	No
4	CCL4	50368 430047	1111	0.774	0.0931	No
5	CXCL1	2690537	1459	0.580	0.0913	No
6	TGFB1	1940162	1706	0.484	0.0922	No
7	ALOX5AP	3170440	1747	0.472	0.1039	No
8	BLNK	70288 6590092	1838	0.443	0.1120	No
9	NFKB1	5420358	1928	0.422	0.1195	No
10	IL10RB	2900025	2651	0.227	0.0871	No
11	TPST1	2570358	2658	0.226	0.0934	No
12	CCL3	2810092	2985	0.168	0.0807	No
13	SCYE1	4730736	2993	0.167	0.0852	No
14	AIF1	130332 5220017	3480	0.110	0.0622	No
15	LTB4R	1770056	3581	0.102	0.0598	No
16	SCG2	5670438 130671	3599	0.100	0.0618	No
17	CHST2	3180682	3616	0.099	0.0638	No
18	IL13	7040021	4284	0.063	0.0296	No
19	CXCL2	610398	4552	0.054	0.0167	No
20	CCL24	670129	4658	0.051	0.0126	No
21	LBP	6860019	4755	0.048	0.0088	No
22	CHRNA7	2970446	4779	0.047	0.0089	No
23	AHSG	6450014	4946	0.042	0.0012	No
24	ELF3	770551 6180019	5236	0.036	-0.0134	No
25	AOAH	5390672	5443	0.032	-0.0236	No
26	ADORA2A	1990687	5457	0.032	-0.0233	No
27	GHSR	1980465 7050521	5535	0.031	-0.0266	No
28	NFX1	450504	5632	0.029	-0.0309	No
29	IL5	6370364 1050193	5640	0.029	-0.0305	No
30	PLA2G7	4730092	6310	0.020	-0.0660	No
31	APCS	2060500	6391	0.019	-0.0698	No
32	ORM2	2100048	6690	0.017	-0.0854	No
33	AOC3	6840129	6754	0.016	-0.0883	No
34	CCL22	6380086	6862	0.016	-0.0936	No
35	CRP	3140711	6867	0.016	-0.0934	No
36	CCR1	3440672	6921	0.015	-0.0958	No
37	CCR3	50427	6972	0.015	-0.0981	No
38	PLA2G2D	2850047	6991	0.015	-0.0986	No
39	KNG1	6400576 6770347	7036	0.014	-0.1006	No
40	EDG3	3360110	7092	0.014	-0.1031	No
41	CDO1	2480279	7301	0.013	-0.1140	No
42	FOS	1850315	7390	0.012	-0.1184	No
43	CX3CL1	3990707	7694	0.011	-0.1345	No
44	ADORA1	6370520	7753	0.010	-0.1373	No
45	IL8RB	450592 1170537	7790	0.010	-0.1390	No
46	IL1A	3610056	8005	0.009	-0.1502	No
47	ORM1	1500563	8120	0.009	-0.1562	No
48	NMI	520270	8238	0.008	-0.1622	No
49	SELE	7100368	8486	0.007	-0.1754	No
50	HRH1	840100	8822	0.006	-0.1933	No
51	CCR5	1980072 5910722	8890	0.006	-0.1967	No
52	IL9	3440338	8982	0.006	-0.2015	No
53	IL8RA	1580100	9181	0.005	-0.2121	No
54	CCL11	1770347	9186	0.005	-0.2121	No
55	C3AR1	5720131	9234	0.005	-0.2145	No
56	IRAK2	730400	9447	0.004	-0.2259	No
57	CXCL10	2450408	9533	0.004	-0.2303	No
58	ANXA1	2320053	9607	0.004	-0.2342	No
59	IL20	4850647	9632	0.004	-0.2354	No
60	PTX3	870309 3520102	9808	0.003	-0.2447	No
61	NLRP3	1980064 4010180	9931	0.003	-0.2512	No
62	XCR1	5080072	9942	0.003	-0.2517	No
63	NOX4	6040136	9957	0.003	-0.2524	No
64	F11R	1740128	10053	0.002	-0.2574	No
65	AGER	5860538 5910180	10211	0.002	-0.2659	No
66	ADORA3	630333	10395	0.002	-0.2757	No
67	PLA2G2E	4060128	10410	0.001	-0.2764	No
68	IFNA2	4150162	10548	0.001	-0.2838	No
69	CYBB	3870020	10809	0.000	-0.2978	No
70	IL1RAP	50546 450711 1580397 3940301 5890181 6370373	10939	-0.000	-0.3048	No
71	AOX1	110082 6290450	11009	-0.000	-0.3085	No
72	IL17C	5690347	11109	-0.001	-0.3139	No
73	CXCL11	1090551	11236	-0.001	-0.3206	No
74	CCR2	1450519	11357	-0.001	-0.3271	No
75	MBL2	6370446	11483	-0.002	-0.3338	No
76	MEFV	510364	11493	-0.002	-0.3342	No
77	TNFAIP6	3390161	11686	-0.002	-0.3445	No
78	CD40LG	3120270	11850	-0.003	-0.3533	No
79	NFATC4	2470735	11894	-0.003	-0.3555	No
80	ALOX15	6620333	12159	-0.004	-0.3696	No
81	FPRL1	3360451	12275	-0.004	-0.3757	No
82	TACR1	70358 3840411	12366	-0.005	-0.3804	No
83	IL18RAP	3850088	12831	-0.007	-0.4053	No
84	LY75	1990358 4590136	12834	-0.007	-0.4052	No
85	HDAC9	1990010 2260133	13034	-0.008	-0.4157	No
86	CFHR1	1850050 5550519	13562	-0.013	-0.4438	No
87	GHRL	2360619 6760438	13918	-0.017	-0.4625	No
88	HDAC5	2370035 6370139	14528	-0.033	-0.4944	No
89	CCR4	4480184	14767	-0.044	-0.5060	No
90	PARP4	4070095	14959	-0.055	-0.5147	No
91	KLRG1	2360133	15435	-0.094	-0.5377	No
92	CD40	2760471 2940390 6220402 6220452	15600	-0.112	-0.5432	No
93	MGLL	2030446 4210520	15738	-0.128	-0.5469	No
94	CXCL9	1570673	15902	-0.148	-0.5514	No
95	RAC1	4810687	16093	-0.176	-0.5565	No
96	RIPK2	5050072 6290632	16153	-0.187	-0.5542	No
97	NFRKB	3130538	16188	-0.195	-0.5503	No
98	VPS45	1770035	16356	-0.228	-0.5527	No
99	RELA	3830075	16834	-0.358	-0.5680	Yes
100	PRDX5	1660592 2030091	17019	-0.421	-0.5656	Yes
101	NOD1	2360368	17050	-0.431	-0.5546	Yes
102	GPR68	1190537	17524	-0.644	-0.5613	Yes
103	HDAC7A	2570278	18126	-1.153	-0.5601	Yes
104	CXCR4	4590519	18148	-1.184	-0.5266	Yes
105	NFE2L1	6130053	18175	-1.214	-0.4924	Yes
106	CD97	1090673 1690575	18375	-1.717	-0.4529	Yes
107	S100A9	7050528	18408	-1.792	-0.4022	Yes
108	S100A8	70112	18489	-2.180	-0.3427	Yes
109	CCL5	3710397	18540	-2.493	-0.2725	Yes
110	CCR7	2060687	18547	-2.525	-0.1989	Yes
111	NFATC3	5050520	18574	-2.838	-0.1172	Yes
112	TNFRSF1A	1090390 6520735	18609	-4.080	0.0004	Yes