Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	V$USF_C
Enrichment Score (ES)	0.50717854
Normalized Enrichment Score (NES)	1.2441324
Nominal p-value	0.05625879
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PABPC1	2650180 2690253 6020632 1990270	22	4.554	0.0580	Yes
2	PABPC4	1990170 6760270 5390138	29	4.133	0.1114	Yes
3	TIMM10	610070 1450019	45	3.538	0.1566	Yes
4	HMOX1	1740687	64	3.070	0.1955	Yes
5	SH3KBP1	670102 2850458 7000309	167	2.200	0.2186	Yes
6	ENO3	5270136	198	2.033	0.2434	Yes
7	SDC1	3440471 6350408	321	1.645	0.2581	Yes
8	G6PC3	1580487 5390253	349	1.594	0.2774	Yes
9	EXOSC5	3370671	416	1.466	0.2928	Yes
10	IPO4	5050619	487	1.348	0.3066	Yes
11	ABCB6	6350138	509	1.319	0.3226	Yes
12	FBL	5130020	550	1.266	0.3369	Yes
13	RPS19	5860066	558	1.260	0.3529	Yes
14	PFDN2	4230156	657	1.117	0.3621	Yes
15	RUSC1	6450093 6980575	689	1.074	0.3743	Yes
16	PA2G4	2030463	771	1.012	0.3831	Yes
17	GPD1	2480095	840	0.958	0.3919	Yes
18	AKAP12	1450739	903	0.910	0.4003	Yes
19	FKBP11	3170575	921	0.897	0.4111	Yes
20	HSPE1	3170438	974	0.864	0.4195	Yes
21	EXOSC2	6900471	1079	0.792	0.4241	Yes
22	HYAL2	1500152	1097	0.780	0.4333	Yes
23	NUDC	4780025	1121	0.768	0.4421	Yes
24	HERPUD1	7100440	1122	0.765	0.4520	Yes
25	PSEN2	130382	1288	0.662	0.4517	Yes
26	ALDH3B1	4210010 6940403	1331	0.638	0.4577	Yes
27	PPAT	1980019	1342	0.632	0.4654	Yes
28	OPRS1	6130128 6290717	1415	0.598	0.4692	Yes
29	EIF4B	5390563 5270577	1494	0.564	0.4723	Yes
30	ANXA6	2190014	1560	0.540	0.4758	Yes
31	LYAR	7000402	1562	0.539	0.4828	Yes
32	PER1	3290315	1692	0.490	0.4822	Yes
33	SLC39A7	5570131	1714	0.483	0.4873	Yes
34	RHEBL1	2810576	1761	0.467	0.4909	Yes
35	BCKDHA	50189	1845	0.441	0.4921	Yes
36	POLR2H	5890242	1878	0.433	0.4960	Yes
37	PSMB3	4280594	1881	0.433	0.5015	Yes
38	GTF2H1	2570746 2650148	1894	0.430	0.5065	Yes
39	HMGN2	3140091	2032	0.386	0.5040	Yes
40	RPL22	4070070	2118	0.364	0.5042	Yes
41	MYST3	5270500	2215	0.339	0.5034	Yes
42	EIF2C2	770451	2248	0.331	0.5059	Yes
43	BHLHB2	7040603	2302	0.317	0.5072	Yes
44	PAICS	610142	2382	0.296	0.5067	No
45	POLR3E	380152	2456	0.279	0.5064	No
46	IPO13	3870088	2551	0.253	0.5046	No
47	SRP72	3990427	2628	0.233	0.5035	No
48	FHOD1	2680279	2637	0.230	0.5061	No
49	FARP1	5290102 7100341	2750	0.205	0.5026	No
50	AMPD2	630093 1170070	2809	0.195	0.5020	No
51	BCL9L	6940053	2850	0.189	0.5023	No
52	GRK6	1500053	3131	0.148	0.4890	No
53	TNFRSF21	6380100	3133	0.148	0.4909	No
54	ARF6	3520026	3246	0.134	0.4866	No
55	CACNA1D	1740315 4730731	3293	0.128	0.4857	No
56	UBE1	4150139 7050463	3494	0.109	0.4763	No
57	MYOHD1	1410520	3640	0.098	0.4697	No
58	CNNM1	2190433	3658	0.096	0.4700	No
59	LTBR	2450341	3666	0.095	0.4709	No
60	MPP3	1400056 4480411 6770168	3903	0.081	0.4591	No
61	NR1D1	2360471 770746 6590204	3969	0.078	0.4566	No
62	SYT3	6380017	4082	0.072	0.4515	No
63	SUCLG2	5340397 5700270	4117	0.071	0.4506	No
64	UBXD3	5050193	4220	0.066	0.4459	No
65	AVP	2100113	4224	0.066	0.4466	No
66	SOCS5	3830398 7100093	4232	0.065	0.4470	No
67	TIMM9	2450484	4272	0.064	0.4458	No
68	ETV4	2450605	4373	0.059	0.4411	No
69	B4GALT2	780037	4396	0.058	0.4407	No
70	CTSF	6100021	4548	0.054	0.4332	No
71	MNT	4920575	4693	0.049	0.4260	No
72	RUNX2	1400193 4230215	4938	0.042	0.4133	No
73	HOXA3	3610632 6020358	4940	0.042	0.4138	No
74	HPCAL4	2600484	5352	0.034	0.3920	No
75	TBX4	3060008	5407	0.033	0.3895	No
76	TIAL1	4150048 6510605	5446	0.032	0.3878	No
77	SLC26A2	2360278	5483	0.032	0.3863	No
78	DNMT3A	4050068 4810717	5501	0.031	0.3858	No
79	NXPH1	3870546	5525	0.031	0.3849	No
80	BMP2K	60541 5570504	5739	0.027	0.3737	No
81	ETV1	70735 2940603 5080463	6177	0.022	0.3503	No
82	DNAJB9	460114	6538	0.018	0.3310	No
83	RPL13A	2680519 5700142	6623	0.018	0.3267	No
84	GRIN2A	6550538	6663	0.017	0.3248	No
85	SLC6A15	5290176 6040017	6847	0.016	0.3150	No
86	CGN	5890139 6370167 6400537	7066	0.014	0.3034	No
87	NLN	1450576 5870575	7082	0.014	0.3028	No
88	LAP3	2570064	7137	0.014	0.3000	No
89	HS3ST3A1	2230497	7327	0.013	0.2899	No
90	ARRDC3	4610390	7551	0.011	0.2780	No
91	ADAMTS17	6510739	7754	0.010	0.2671	No
92	STMN1	1990717	7825	0.010	0.2635	No
93	TLL1	2680315	8101	0.009	0.2487	No
94	POGK	5290315	8410	0.008	0.2321	No
95	DRD1	430025	8411	0.008	0.2322	No
96	FADS3	3120079	8682	0.007	0.2176	No
97	NKX2-3	1990736 6940088	8784	0.006	0.2122	No
98	COL2A1	460446 3940500	8812	0.006	0.2108	No
99	CHST11	6760546	9002	0.005	0.2006	No
100	SC5DL	6650390	9089	0.005	0.1960	No
101	SLC12A5	1980692	9505	0.004	0.1736	No
102	HPCA	6860010	9522	0.004	0.1728	No
103	MTHFD1	5900398 6520427	9709	0.003	0.1627	No
104	SYT6	2510280 3850128 4540064	9730	0.003	0.1617	No
105	FLT3	2640487	9850	0.003	0.1552	No
106	PAX6	1190025	9898	0.003	0.1527	No
107	GPRC5C	1580372	9902	0.003	0.1526	No
108	BMP4	380113	9940	0.003	0.1506	No
109	KIAA0427	1690435	10031	0.003	0.1458	No
110	ABCA1	6290156	10074	0.002	0.1435	No
111	ARX	6900504	10218	0.002	0.1358	No
112	CHRM1	4280619	10311	0.002	0.1308	No
113	PRKCE	5700053	10501	0.001	0.1206	No
114	HOXC12	5270411	10558	0.001	0.1176	No
115	FGF11	840292	10594	0.001	0.1157	No
116	LIN28	6590672	10871	0.000	0.1007	No
117	SATB2	2470181	10987	-0.000	0.0945	No
118	SGTB	460170	11307	-0.001	0.0772	No
119	EIF3S1	6130368 6770044	11330	-0.001	0.0760	No
120	FGF14	2630390 3520075 6770048	11417	-0.001	0.0714	No
121	HOXC13	4070722	11552	-0.002	0.0641	No
122	NPTX1	3710736	11851	-0.003	0.0480	No
123	NPM1	4730427	12090	-0.004	0.0351	No
124	LHX9	2350112	12243	-0.004	0.0269	No
125	PLA2G4A	6380364	12253	-0.004	0.0265	No
126	HHIP	6940438	12396	-0.005	0.0189	No
127	PIGW	4810072	12490	-0.005	0.0139	No
128	SET	6650286	12669	-0.006	0.0043	No
129	SCFD2	2480504	12697	-0.006	0.0029	No
130	ELOVL4	5220333	13092	-0.009	-0.0183	No
131	ENPP6	110524 580563	13105	-0.009	-0.0189	No
132	MCM8	6130743	13113	-0.009	-0.0191	No
133	GTF2A1	4120138 4920524 5390110 1230397	13274	-0.010	-0.0277	No
134	SNCAIP	4010551	13539	-0.013	-0.0418	No
135	PPARGC1B	3290114	13767	-0.015	-0.0540	No
136	DAZL	4050082	13800	-0.016	-0.0555	No
137	TDRD1	4230301 6110750	13963	-0.018	-0.0640	No
138	SNX5	1570021 6860609	14121	-0.021	-0.0723	No
139	XRN2	130603 1230113 4230309	14153	-0.021	-0.0737	No
140	LRP8	3610746 5360035	14160	-0.022	-0.0737	No
141	GPX1	4150093	14266	-0.024	-0.0791	No
142	ADCY3	2350347 3440242	14429	-0.029	-0.0875	No
143	CDC14A	4050132	14547	-0.033	-0.0934	No
144	WEE1	3390070	14710	-0.041	-0.1017	No
145	HOXA4	940152	15064	-0.062	-0.1200	No
146	EEF1E1	4540711	15217	-0.073	-0.1273	No
147	SEMA7A	2630239 5050593	15256	-0.075	-0.1284	No
148	DAZAP1	5890563	15260	-0.076	-0.1276	No
149	HSPA4	1050170 3450309	15362	-0.087	-0.1320	No
150	CAMK4	1690091	15490	-0.100	-0.1375	No
151	EIF4E	1580403 70133 6380215	15566	-0.108	-0.1402	No
152	SLC31A2	1450577	15598	-0.111	-0.1404	No
153	CRMP1	4810014	15780	-0.132	-0.1486	No
154	CENTB5	5690128	15836	-0.139	-0.1497	No
155	EIF5A	1500059 5290022 6370026	15867	-0.144	-0.1495	No
156	CNOT4	2320242 6760706	15894	-0.148	-0.1490	No
157	RPL19	5550592	15897	-0.148	-0.1472	No
158	CLCN2	1940021	15981	-0.161	-0.1496	No
159	PFN1	6130132	15998	-0.164	-0.1483	No
160	EFNB1	2970433	16084	-0.175	-0.1507	No
161	USP2	1190292 1240253 4850035	16094	-0.176	-0.1489	No
162	EIF4G1	4070446	16118	-0.180	-0.1478	No
163	IVNS1ABP	4760601 6520113	16269	-0.211	-0.1531	No
164	SIRT1	1190731	16288	-0.214	-0.1513	No
165	PDK2	2690017	16619	-0.299	-0.1654	No
166	MAX	5220021	16704	-0.322	-0.1657	No
167	MXD4	4810113	16889	-0.375	-0.1708	No
168	MORF4L2	6450133	17074	-0.438	-0.1751	No
169	MAT2A	4070026 4730079 6020280	17099	-0.450	-0.1706	No
170	ACVR2B	1660546	17449	-0.606	-0.1817	No
171	SLC20A1	6420014	17461	-0.615	-0.1743	No
172	RXRB	1780040 5340438	17500	-0.629	-0.1681	No
173	HSPH1	1690017	17547	-0.655	-0.1621	No
174	GABARAP	1450286	17563	-0.667	-0.1543	No
175	DIABLO	2360170	17610	-0.690	-0.1478	No
176	PTMA	5570148	17633	-0.699	-0.1399	No
177	GNA13	4590102	17647	-0.709	-0.1314	No
178	H3F3A	2900086	17766	-0.783	-0.1276	No
179	BCAS3	4050647	17787	-0.795	-0.1184	No
180	TEF	1050050 3120397 4060487	17981	-0.960	-0.1163	No
181	WBP2	3170128	18131	-1.163	-0.1093	No
182	PPP1R9B	3130619	18136	-1.173	-0.0943	No
183	FCHSD2	5720092	18137	-1.173	-0.0790	No
184	HSPBAP1	4060022	18320	-1.547	-0.0688	No
185	RORC	1740121	18527	-2.412	-0.0486	No
186	BCL6	940100	18610	-4.108	0.0003	No