Details for gene set V$EN1

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	truncNotch
GeneSet	V$EN1_01
Enrichment Score (ES)	0.58060646
Normalized Enrichment Score (NES)	1.3031027
Nominal p-value	0.0625
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RPL38	70040 4060138 6200601	1	8.746	0.3389	Yes
2	FIBCD1	1500500	182	2.094	0.4104	Yes
3	UBE2H	1980142 2970079	277	1.757	0.4734	Yes
4	SLC6A9	2470520	292	1.714	0.5391	Yes
5	SYNJ2BP	4150672 6770706	813	0.978	0.5490	Yes
6	NOTCH1	3390114	891	0.923	0.5806	Yes
7	SIPA1L1	50292	2681	0.222	0.4927	No
8	ELN	5080347	3201	0.139	0.4701	No
9	A2BP1	2370390 4590593 5550014	3723	0.091	0.4455	No
10	FOXP2	3520561 4150372 4760524	4262	0.064	0.4190	No
11	OTX2	1190471	4293	0.063	0.4198	No
12	RBM4	2360113 5080750	4428	0.057	0.4148	No
13	NRAS	6900577	4430	0.057	0.4169	No
14	CDX2	3850349	4454	0.057	0.4179	No
15	NOS1	5860129	4766	0.047	0.4029	No
16	RAPGEF5	1500603 3450427 6130056	4999	0.041	0.3920	No
17	HOXB8	3710450	5077	0.040	0.3894	No
18	NRG1	1050332	5184	0.037	0.3851	No
19	RGS6	6040601	5425	0.033	0.3735	No
20	PDGFRA	2940332	5734	0.028	0.3579	No
21	GRIA1	1340152 3780750 4920440	6155	0.022	0.3361	No
22	TFEB	3390121	6226	0.021	0.3331	No
23	RTKN	5910253 6380082	6400	0.019	0.3246	No
24	MYOG	3190672	6547	0.018	0.3174	No
25	GPC3	6180735	6598	0.018	0.3154	No
26	NEO1	1990154	6875	0.016	0.3011	No
27	OTP	2630070	7497	0.012	0.2680	No
28	NKX2-2	4150731	7557	0.011	0.2653	No
29	ARHGAP6	2060121	7659	0.011	0.2603	No
30	UTY	5890441	9072	0.005	0.1843	No
31	ANK2	6510546	9151	0.005	0.1803	No
32	GPC4	5910408	9341	0.004	0.1703	No
33	TTC12	4480632	9353	0.004	0.1698	No
34	HOXD10	6100039	9394	0.004	0.1678	No
35	ATP9B	3710494 6020239	9874	0.003	0.1421	No
36	PAX6	1190025	9898	0.003	0.1410	No
37	FGF17	3130022	9959	0.003	0.1379	No
38	PLCB1	2570050 7100102	10158	0.002	0.1273	No
39	LMO1	3170528	10605	0.001	0.1032	No
40	BCOR	1660452 3940053	10650	0.001	0.1009	No
41	HOXA11	6980133	10713	0.001	0.0976	No
42	EFEMP1	5860324	10742	0.001	0.0961	No
43	NPR3	1580239	10768	0.000	0.0947	No
44	HOXD3	6450154	10852	0.000	0.0903	No
45	PXMP3	2100088 1400458 6650671	10875	0.000	0.0891	No
46	KLF15	4230164	11199	-0.001	0.0717	No
47	BDNF	2940128 3520368	11224	-0.001	0.0704	No
48	IRX4	1980102	11344	-0.001	0.0641	No
49	GNRH1	430167	11347	-0.001	0.0640	No
50	EYA4	5360286	11418	-0.001	0.0603	No
51	PAMCI	2320687	12060	-0.004	0.0258	No
52	GREM1	3940180	12073	-0.004	0.0253	No
53	SH3BGRL2	1780239	12255	-0.004	0.0157	No
54	LAPTM4B	2060377 4150398	12399	-0.005	0.0082	No
55	SLC6A14	380368	12447	-0.005	0.0059	No
56	GAP43	3130504	12528	-0.006	0.0018	No
57	ERBB4	4610400 4810017	12582	-0.006	-0.0008	No
58	MAP3K5	6020041 6380162	12783	-0.007	-0.0114	No
59	EOMES	2100707	13226	-0.010	-0.0348	No
60	MITF	380056	13233	-0.010	-0.0348	No
61	RAB2B	6200091	13308	-0.010	-0.0384	No
62	PCDH9	2100136	13555	-0.013	-0.0511	No
63	RARB	430139 1410138	13691	-0.014	-0.0579	No
64	ISL1	4810239	13779	-0.016	-0.0620	No
65	NR4A3	2900021 5860095 5910039	14428	-0.029	-0.0958	No
66	HTR7	2680176	14490	-0.031	-0.0979	No
67	CDC14A	4050132	14547	-0.033	-0.0996	No
68	FHL1	60278	14840	-0.049	-0.1135	No
69	HOXA4	940152	15064	-0.062	-0.1231	No
70	TCF4	520021	15471	-0.097	-0.1412	No
71	ZADH2	520438	15678	-0.120	-0.1477	No
72	CAMLG	1410184	16174	-0.191	-0.1670	No
73	CREM	840156 6380438 6660041 6660168	16266	-0.211	-0.1638	No
74	MAP4K4	2360059	16726	-0.329	-0.1758	No
75	UTX	2900017 6770452	16831	-0.357	-0.1675	No
76	MORF4L2	6450133	17074	-0.438	-0.1636	No
77	SAV1	5420541	17122	-0.462	-0.1482	No
78	MAPK14	5290731	17410	-0.583	-0.1412	No
79	NXF1	1570377	17627	-0.697	-0.1258	No
80	RDH10	6650070	17692	-0.737	-0.1007	No
81	CTCF	5340017	18177	-1.215	-0.0797	No
82	MMP14	670079	18560	-2.666	0.0030	No