Details for gene set TTGCACT,MIR-130A,MIR-301,MIR-130B[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TTGCACT,MIR-130A,MIR-301,MIR-130B
Enrichment Score (ES)	-0.6397733
Normalized Enrichment Score (NES)	-1.772155
Nominal p-value	0.0
FDR q-value	0.007820007
FWER p-Value	0.011

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DOCK3	3290273 3360497 2850068	135	2.388	0.0193	No
2	DPYSL2	2100427 3130112 5700324	180	2.110	0.0404	No
3	TGFBR2	1780711 1980537 6550398	275	1.759	0.0549	No
4	TIMP2	4780609	417	1.464	0.0636	No
5	CHST1	50601	430	1.446	0.0791	No
6	RAB34	770411	978	0.863	0.0589	No
7	FASTK	2690053 4280288 4610551 6370292	1048	0.816	0.0643	No
8	INHBB	2680092	1107	0.775	0.0697	No
9	MID1IP1	2570739	1172	0.741	0.0745	No
10	HRB	1660397 6110398	1456	0.582	0.0656	No
11	TARDBP	870390 2350093	1746	0.472	0.0551	No
12	ITPK1	3360056	1920	0.423	0.0504	No
13	SASH1	4070270	2232	0.335	0.0372	No
14	SNPH	2680484	2286	0.321	0.0379	No
15	SUV39H1	630112	2325	0.311	0.0393	No
16	IRF1	2340152 3450592 6290121 6980577	2547	0.253	0.0301	No
17	YTHDF2	4060332 4610279	2569	0.248	0.0317	No
18	NPNT	130301	2613	0.236	0.0320	No
19	SKP1A	2450102	2641	0.230	0.0331	No
20	HABP4	840487	2842	0.189	0.0243	No
21	TRPS1	870100	3008	0.165	0.0172	No
22	ABCB7	4150324	3179	0.142	0.0095	No
23	RUNX3	3800546	3198	0.140	0.0101	No
24	SH3D19	6020520	3290	0.129	0.0066	No
25	SPG20	3360202	3633	0.098	-0.0110	No
26	EDA	6420441	3676	0.095	-0.0122	No
27	ARHGAP1	2810010 5270064	3866	0.083	-0.0216	No
28	LDLR	5670386	3895	0.081	-0.0222	No
29	SOCS5	3830398 7100093	4232	0.065	-0.0398	No
30	TSC1	1850672	4247	0.065	-0.0398	No
31	SMOC2	1170170	4290	0.063	-0.0414	No
32	PRKD3	5220520 5890519	4393	0.058	-0.0463	No
33	ZBTB4	6450441	4449	0.057	-0.0487	No
34	SOX21	1050110 4670041 6660338	4588	0.053	-0.0556	No
35	PTGFRN	4120524	4599	0.052	-0.0556	No
36	NME7	60170 1230551 2850333 4200102 4560411 5090647	4617	0.052	-0.0559	No
37	PTPRM	6370136	4689	0.050	-0.0592	No
38	HIVEP2	6520538	4690	0.050	-0.0587	No
39	TESK2	6520524	4797	0.046	-0.0639	No
40	ROBO2	450136	4853	0.045	-0.0664	No
41	MLLT6	3870168	4881	0.044	-0.0674	No
42	NEUROD1	3060619	4920	0.043	-0.0690	No
43	RUNX2	1400193 4230215	4938	0.042	-0.0695	No
44	HOXA3	3610632 6020358	4940	0.042	-0.0690	No
45	ACVR1	6840671	5119	0.039	-0.0783	No
46	PRKAA1	510156	5271	0.036	-0.0861	No
47	BMPR2	5340066 6960328	5281	0.035	-0.0862	No
48	ARID4B	730754 6660026	5303	0.035	-0.0870	No
49	HOXB3	520292	5339	0.034	-0.0885	No
50	PTPRG	2650524 1340022	5429	0.033	-0.0930	No
51	CSNK1G1	840082 1230575 3940647	5545	0.031	-0.0989	No
52	CANX	4760402	5561	0.030	-0.0994	No
53	PDGFRA	2940332	5734	0.028	-0.1084	No
54	RASSF1	2760364 4850725	5818	0.026	-0.1127	No
55	NHLH2	6200021	5844	0.026	-0.1138	No
56	STC1	360161	5992	0.024	-0.1215	No
57	ESR1	4060372 5860193	6008	0.023	-0.1221	No
58	ATRX	2340039 3610132 4210373	6049	0.023	-0.1240	No
59	POU3F2	6620484	6205	0.021	-0.1322	No
60	GRM7	4230110	6220	0.021	-0.1327	No
61	MAP3K9	3290707	6252	0.021	-0.1342	No
62	PPARG	1990168 2680603 6130632	6352	0.020	-0.1393	No
63	SPATA2	1230215 5910541	6450	0.019	-0.1444	No
64	CREB5	2320368	6567	0.018	-0.1505	No
65	SNAP25	360520	6771	0.016	-0.1614	No
66	ZFPM2	460072	6800	0.016	-0.1628	No
67	RASD1	2450463	6810	0.016	-0.1631	No
68	WDFY3	3610041 4560333 4570273	7000	0.015	-0.1732	No
69	ADCY2	4610100	7007	0.015	-0.1734	No
70	SOX5	2370576 2900167 3190128 5050528	7032	0.014	-0.1745	No
71	B4GALT5	1230692	7046	0.014	-0.1751	No
72	MAPRE3	7050504	7209	0.013	-0.1837	No
73	CLTC	6590458	7275	0.013	-0.1871	No
74	UCP3	4200128 4210148	7315	0.013	-0.1891	No
75	NRBF2	6110672	7380	0.012	-0.1925	No
76	PLAA	60706 6370369	7467	0.012	-0.1970	No
77	ARRDC3	4610390	7551	0.011	-0.2014	No
78	RAI2	6770333	7576	0.011	-0.2026	No
79	NRP2	4070400 5860041 6650446	7594	0.011	-0.2034	No
80	ARHGAP12	1050181	7751	0.010	-0.2118	No
81	MAMDC1	3710129 4480075	7782	0.010	-0.2133	No
82	WNK3	4060053	7786	0.010	-0.2134	No
83	ST18	5720537	7789	0.010	-0.2133	No
84	PHACTR2	1580154	7795	0.010	-0.2135	No
85	M6PR	2480458 3290593 3840324	7811	0.010	-0.2142	No
86	ARHGEF12	3990195	8065	0.009	-0.2279	No
87	PAFAH1B1	4230333 6420121 6450066	8128	0.009	-0.2312	No
88	BIRC6	70148	8141	0.009	-0.2317	No
89	NR3C2	2480324 6400093	8408	0.008	-0.2461	No
90	SHANK2	1500452	8809	0.006	-0.2679	No
91	POU4F1	2260315	8938	0.006	-0.2748	No
92	BHLHB3	3450438	9088	0.005	-0.2828	No
93	SLMAP	3120093 4760128 5390528	9150	0.005	-0.2861	No
94	FMR1	5050075	9172	0.005	-0.2872	No
95	EIF2C1	6900551	9369	0.004	-0.2978	No
96	DLL1	1770377	9609	0.004	-0.3108	No
97	USP33	780047	9629	0.004	-0.3118	No
98	LRCH2	2900162	9647	0.004	-0.3127	No
99	TRIM2	430546 1170286	9661	0.004	-0.3133	No
100	RTN1	4150452 4850176	9912	0.003	-0.3269	No
101	QKI	5220093 6130044	9948	0.003	-0.3288	No
102	FSTL5	770280	9951	0.003	-0.3289	No
103	BTBD3	1980041 2510577 3190053 4200746	10019	0.003	-0.3325	No
104	ABCA1	6290156	10074	0.002	-0.3354	No
105	PLCB1	2570050 7100102	10158	0.002	-0.3399	No
106	SCRT1	6760736	10305	0.002	-0.3479	No
107	BTBD7	730288	10570	0.001	-0.3622	No
108	EMX2	1660092	10673	0.001	-0.3678	No
109	DCBLD2	5890333	10677	0.001	-0.3679	No
110	MYT1	6770524	10771	0.000	-0.3730	No
111	EXOC5	7000711	10889	0.000	-0.3794	No
112	NPAT	3800594 4670026	10901	0.000	-0.3800	No
113	TAF4	1450170	10913	0.000	-0.3806	No
114	TRIM3	5570156	10946	-0.000	-0.3823	No
115	CSF1	3120400	10953	-0.000	-0.3826	No
116	CLCN5	4200390	10983	-0.000	-0.3842	No
117	SULF1	430575	11205	-0.001	-0.3962	No
118	CNOT7	2450338 5720397	11221	-0.001	-0.3970	No
119	AKAP1	110148 1740735 2260019 7000563	11256	-0.001	-0.3989	No
120	PGM2L1	2350035	11376	-0.001	-0.4054	No
121	ADAMTS18	5690008	11507	-0.002	-0.4124	No
122	NEUROG1	380341	11713	-0.002	-0.4236	No
123	EDG1	4200619	11785	-0.003	-0.4274	No
124	GDA	3290435	11839	-0.003	-0.4302	No
125	NPTX1	3710736	11851	-0.003	-0.4308	No
126	FOXF2	1240091	11898	-0.003	-0.4333	No
127	STARD13	540722	11912	-0.003	-0.4340	No
128	ZCCHC14	5900288	11936	-0.003	-0.4352	No
129	ROBO1	3710398	11958	-0.003	-0.4363	No
130	EREG	50519 4920129	12084	-0.004	-0.4431	No
131	ACSL4	510020 1240041 3190050 4540500 5570463	12110	-0.004	-0.4444	No
132	CLOCK	1410070 2940292 3390075	12130	-0.004	-0.4454	No
133	UBE2D1	1850400	12156	-0.004	-0.4467	No
134	MAP3K12	2470373 6420162	12294	-0.005	-0.4541	No
135	ABHD3	2370091	12322	-0.005	-0.4555	No
136	MAFB	1230471	12410	-0.005	-0.4602	No
137	ATP2B2	3780397	12439	-0.005	-0.4617	No
138	RXRA	3800471	12485	-0.005	-0.4640	No
139	PTP4A1	130692	12489	-0.005	-0.4642	No
140	GAP43	3130504	12528	-0.006	-0.4662	No
141	ERBB4	4610400 4810017	12582	-0.006	-0.4690	No
142	WNT1	4780148	12647	-0.006	-0.4724	No
143	EFNB2	5340136	12804	-0.007	-0.4808	No
144	ZFYVE9	6980288 7100017	12909	-0.008	-0.4864	No
145	HOXA5	6840026	12923	-0.008	-0.4870	No
146	SLC24A3	5080707	12936	-0.008	-0.4876	No
147	RAB5A	6520324	13038	-0.008	-0.4930	No
148	ST8SIA3	6940427	13112	-0.009	-0.4969	No
149	AKAP7	4610044	13251	-0.010	-0.5043	No
150	WNT2B	3130088 5960575	13282	-0.010	-0.5058	No
151	COL19A1	6220441	13312	-0.010	-0.5073	No
152	RAPGEF4	6100563	13342	-0.011	-0.5087	No
153	MEOX2	6400288	13392	-0.011	-0.5113	No
154	CD69	380167 4730088	13448	-0.012	-0.5141	No
155	MAT2B	1690139 2510706	13677	-0.014	-0.5264	No
156	CSMD1	1780672	13690	-0.014	-0.5269	No
157	ZNF3	1770193 2320047 2570273	13750	-0.015	-0.5299	No
158	SLC9A2	4920022 5910133	13809	-0.016	-0.5329	No
159	SNX5	1570021 6860609	14121	-0.021	-0.5496	No
160	LRP8	3610746 5360035	14160	-0.022	-0.5515	No
161	ERBB2IP	580253 1090672	14260	-0.024	-0.5566	No
162	WDR20	1240373	14319	-0.026	-0.5595	No
163	ATP11A	1240717 5570603	14326	-0.026	-0.5595	No
164	ASXL2	130670	14336	-0.026	-0.5597	No
165	MBNL1	2640762 7100048	14387	-0.028	-0.5621	No
166	PIGA	1940435 5290692	14563	-0.034	-0.5713	No
167	TBC1D8	2340253	14566	-0.034	-0.5710	No
168	EIF2C4	2940577 5900563	14575	-0.035	-0.5710	No
169	ABCC5	2100600 5050692	14584	-0.035	-0.5711	No
170	LNPEP	1170092 1940093 3120025	14653	-0.038	-0.5744	No
171	NIPA1	380600	14662	-0.039	-0.5744	No
172	SFMBT1	2360450 2370070	14689	-0.040	-0.5753	No
173	WEE1	3390070	14710	-0.041	-0.5760	No
174	ATRN	870735 3360390	14775	-0.045	-0.5790	No
175	R3HDM1	940685 3290161	14822	-0.048	-0.5809	No
176	LRP4	1740253	14977	-0.056	-0.5887	No
177	MIB1	3800537	14980	-0.056	-0.5882	No
178	BLCAP	3990253	14992	-0.057	-0.5882	No
179	ACSL1	2900520	15111	-0.065	-0.5939	No
180	TTYH3	2100082	15134	-0.066	-0.5943	No
181	SNF1LK	6110403	15175	-0.070	-0.5957	No
182	RNF38	1940746 3140133 3840601	15210	-0.072	-0.5968	No
183	KIT	7040095	15333	-0.083	-0.6025	No
184	TPP1	3990446	15467	-0.097	-0.6086	No
185	PAPD4	1580673 730605 5270112	15502	-0.101	-0.6094	No
186	ADAM12	3390132 4070347	15538	-0.104	-0.6101	No
187	CHD9	430037 2570129 5420398	15642	-0.116	-0.6144	No
188	RKHD1	6860577	15692	-0.121	-0.6158	No
189	E2F7	4200056	15707	-0.123	-0.6151	No
190	RAB5B	130397 1980273 6900731	15709	-0.123	-0.6138	No
191	CUL3	1850520	15767	-0.131	-0.6155	No
192	SOCS6	1170347 7100280	15805	-0.134	-0.6160	No
193	ACBD5	3440397 6020600	15879	-0.145	-0.6183	No
194	CNOT4	2320242 6760706	15894	-0.148	-0.6175	No
195	MLLT10	1410288 3290142	15992	-0.163	-0.6209	No
196	MTF1	520427 2340364	16006	-0.165	-0.6198	No
197	TMEPAI	1340253	16043	-0.170	-0.6199	No
198	SNIP1	5360092	16074	-0.174	-0.6196	No
199	ATXN1	5550156	16088	-0.176	-0.6183	No
200	BRWD1	3130048 3140168 6400601	16106	-0.179	-0.6172	No
201	ENPP5	1780338	16200	-0.196	-0.6201	No
202	BZRAP1	5290487	16256	-0.207	-0.6208	No
203	PITPNM2	1580044	16424	-0.242	-0.6272	No
204	SMARCD2	3830619	16656	-0.308	-0.6363	Yes
205	AP1G1	2360671	16684	-0.316	-0.6343	Yes
206	CALM2	6620463	16731	-0.330	-0.6331	Yes
207	VGLL4	6860463	16818	-0.355	-0.6338	Yes
208	EPS15	4200215	16835	-0.358	-0.6307	Yes
209	EPC2	2470095	16850	-0.365	-0.6274	Yes
210	DICER1	540286	16911	-0.382	-0.6264	Yes
211	UBE2D2	4590671 6510446	16994	-0.412	-0.6263	Yes
212	CCRN4L	50438 5130372	17029	-0.424	-0.6234	Yes
213	CYLD	6590079	17073	-0.438	-0.6208	Yes
214	BAZ2A	730184	17111	-0.455	-0.6178	Yes
215	TMEM32	1170452	17173	-0.482	-0.6157	Yes
216	ULK2	50041 5050176	17174	-0.483	-0.6103	Yes
217	HECA	3310612	17214	-0.498	-0.6069	Yes
218	ARFIP1	3130601	17218	-0.499	-0.6015	Yes
219	STX6	4850750 6770278	17269	-0.519	-0.5984	Yes
220	MECP2	1940450	17281	-0.523	-0.5932	Yes
221	MYB	1660494 5860451 6130706	17283	-0.524	-0.5874	Yes
222	PFKFB3	630706	17316	-0.539	-0.5831	Yes
223	USP48	2480010	17543	-0.654	-0.5882	Yes
224	ARHGAP21	2100168	17551	-0.658	-0.5812	Yes
225	GJA1	5220731	17586	-0.676	-0.5755	Yes
226	PHF12	870400 3130687	17693	-0.738	-0.5731	Yes
227	RAP2C	1690132	17697	-0.741	-0.5649	Yes
228	ATG16L1	5390292	17701	-0.743	-0.5568	Yes
229	DDX6	2630025 6770408	17703	-0.744	-0.5486	Yes
230	OGT	2360131 4610333	17729	-0.756	-0.5415	Yes
231	BACH2	6760131	17749	-0.775	-0.5339	Yes
232	VPS24	3120687	17777	-0.790	-0.5265	Yes
233	DNM2	50176 3170279	17811	-0.821	-0.5192	Yes
234	MAP3K14	5890435	17867	-0.866	-0.5125	Yes
235	SPHK2	2030487 4120670 4850114	17916	-0.910	-0.5050	Yes
236	SNX2	2470068 3360364 6510064	17919	-0.910	-0.4949	Yes
237	GADD45A	2900717	17927	-0.915	-0.4851	Yes
238	SPEN	2060041	17938	-0.930	-0.4753	Yes
239	RHOT1	6760692	17957	-0.941	-0.4657	Yes
240	ATP6V1B2	4060528	18026	-1.010	-0.4582	Yes
241	SMAD5	5700497	18089	-1.085	-0.4494	Yes
242	NCOA1	3610438	18091	-1.092	-0.4373	Yes
243	PSAP	2810338	18104	-1.117	-0.4255	Yes
244	MTMR12	7000181	18142	-1.180	-0.4144	Yes
245	SOX4	2260091	18158	-1.199	-0.4018	Yes
246	ZFYVE26	6860152	18182	-1.223	-0.3894	Yes
247	PELI1	3870215 6900040	18236	-1.337	-0.3774	Yes
248	RALBP1	4780632	18243	-1.354	-0.3626	Yes
249	WDR1	1090129 3990121	18339	-1.617	-0.3497	Yes
250	NDEL1	2370465	18346	-1.631	-0.3318	Yes
251	KLF13	4670563	18402	-1.779	-0.3150	Yes
252	HBP1	2510102 3130010 4210619	18407	-1.792	-0.2952	Yes
253	MAML1	2760008	18415	-1.816	-0.2753	Yes
254	TNRC6A	1240537 6130037 6200010	18420	-1.833	-0.2551	Yes
255	FBXO28	1340358 4730100	18451	-1.921	-0.2353	Yes
256	ITPR1	3450519	18496	-2.221	-0.2129	Yes
257	LRIG1	1050136	18542	-2.493	-0.1875	Yes
258	CNIH	2190484 5080609	18550	-2.537	-0.1596	Yes
259	ELK3	460377 1400762 3710497	18570	-2.752	-0.1299	Yes
260	SMOC1	840039	18614	-4.998	-0.0765	Yes
261	BTG1	4200735 6040131 6200133	18616	-6.861	-0.0000	Yes