Details for gene set TGCACTT,MIR-519C,MIR-519B,MIR-519A[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls #truncNotch_versus_normalThy_repos
Phenotype	phenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	TGCACTT,MIR-519C,MIR-519B,MIR-519A
Enrichment Score (ES)	-0.6031716
Normalized Enrichment Score (NES)	-1.6789305
Nominal p-value	0.0
FDR q-value	0.010609537
FWER p-Value	0.072

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS2	50707 380593	24	4.382	0.0453	No
2	DPYSL2	2100427 3130112 5700324	180	2.110	0.0592	No
3	TRIOBP	940750 1300187 3140072	207	2.005	0.0791	No
4	TGFBR2	1780711 1980537 6550398	275	1.759	0.0941	No
5	TIMP2	4780609	417	1.464	0.1020	No
6	FASTK	2690053 4280288 4610551 6370292	1048	0.816	0.0762	No
7	PIGS	3610142	1158	0.747	0.0782	No
8	LIMK1	5080064	1220	0.704	0.0824	No
9	E2F1	5360093	1330	0.638	0.0832	No
10	FJX1	3390035	1405	0.602	0.0856	No
11	LAPTM4A	450092	1566	0.537	0.0825	No
12	DDX3X	2190020	2105	0.368	0.0570	No
13	SASH1	4070270	2232	0.335	0.0537	No
14	SUV39H1	630112	2325	0.311	0.0520	No
15	GNS	3120458	2340	0.306	0.0545	No
16	ABHD2	4850504 6840010	2343	0.306	0.0576	No
17	DDX11	6590671	2399	0.292	0.0577	No
18	YTHDF2	4060332 4610279	2569	0.248	0.0511	No
19	CELSR2	2320148 6220152	2819	0.194	0.0396	No
20	HABP4	840487	2842	0.189	0.0404	No
21	CPEB2	4760338	2862	0.187	0.0414	No
22	ZDHHC1	3870035	2961	0.171	0.0378	No
23	TNFRSF21	6380100	3133	0.148	0.0301	No
24	HAS2	5360181	3193	0.140	0.0283	No
25	MTMR4	4540524	3617	0.099	0.0063	No
26	ARHGAP1	2810010 5270064	3866	0.083	-0.0064	No
27	SH3BP5	7100408	3867	0.083	-0.0055	No
28	IGF1	1990193 3130377 3290280	3874	0.082	-0.0050	No
29	PFN2	730040 5700026	3882	0.082	-0.0045	No
30	NR1D1	2360471 770746 6590204	3969	0.078	-0.0083	No
31	CRSP2	1940059	3974	0.078	-0.0077	No
32	PANX2	7560121	3977	0.078	-0.0070	No
33	PCDHA11	1510253	4156	0.069	-0.0160	No
34	ST8SIA2	2680082	4176	0.068	-0.0163	No
35	MCM7	3290292 5220056	4238	0.065	-0.0190	No
36	NPAS2	770670	4268	0.064	-0.0199	No
37	SMOC2	1170170	4290	0.063	-0.0204	No
38	PAPOLA	4200286 4850112	4378	0.059	-0.0245	No
39	TBX3	2570672	4440	0.057	-0.0272	No
40	ZBTB4	6450441	4449	0.057	-0.0270	No
41	SOX21	1050110 4670041 6660338	4588	0.053	-0.0340	No
42	PTGFRN	4120524	4599	0.052	-0.0340	No
43	KPNA3	7040088	4609	0.052	-0.0340	No
44	HIVEP2	6520538	4690	0.050	-0.0378	No
45	KCND2	1170128 2100112	4789	0.046	-0.0427	No
46	TESK2	6520524	4797	0.046	-0.0426	No
47	PKIA	4070441	4868	0.044	-0.0459	No
48	SYN2	3990593	4884	0.044	-0.0463	No
49	PTHLH	5290739	4894	0.044	-0.0463	No
50	HOXA3	3610632 6020358	4940	0.042	-0.0483	No
51	PCDHA5	2970347	5050	0.040	-0.0538	No
52	ACVR1	6840671	5119	0.039	-0.0571	No
53	PRKAA1	510156	5271	0.036	-0.0650	No
54	AHCTF1	7040100	5275	0.036	-0.0648	No
55	BMPR2	5340066 6960328	5281	0.035	-0.0647	No
56	ARID4B	730754 6660026	5303	0.035	-0.0654	No
57	HOXB3	520292	5339	0.034	-0.0670	No
58	ASF1A	7050020	5403	0.033	-0.0701	No
59	L3MBTL3	3800113 6660068	5466	0.032	-0.0731	No
60	KCNJ10	2260577	5487	0.031	-0.0739	No
61	CSNK1G1	840082 1230575 3940647	5545	0.031	-0.0767	No
62	FGF9	1050195	5564	0.030	-0.0773	No
63	PDGFRA	2940332	5734	0.028	-0.0863	No
64	VLDLR	870722 3060047 5340452 6550131	5740	0.027	-0.0862	No
65	ACTL6A	5220543 6290541 2450093 4590332 5270722	5781	0.027	-0.0881	No
66	NHLH2	6200021	5844	0.026	-0.0913	No
67	PPP3CA	4760332 6760092	5962	0.024	-0.0974	No
68	STC1	360161	5992	0.024	-0.0987	No
69	FBXL5	510088 770075 2970309	5999	0.023	-0.0988	No
70	NBL1	2480021	6009	0.023	-0.0990	No
71	GRM7	4230110	6220	0.021	-0.1103	No
72	MAP3K9	3290707	6252	0.021	-0.1118	No
73	NEUROG2	5420278	6329	0.020	-0.1157	No
74	DNAJB9	460114	6538	0.018	-0.1269	No
75	CREB5	2320368	6567	0.018	-0.1282	No
76	NFIA	2760129 5860278	6607	0.018	-0.1302	No
77	COL4A3	5910075	6774	0.016	-0.1390	No
78	ZFPM2	460072	6800	0.016	-0.1402	No
79	RASD1	2450463	6810	0.016	-0.1406	No
80	CALD1	1770129 1940397	6886	0.016	-0.1445	No
81	KCNQ2	130204 290291 5860132	6923	0.015	-0.1463	No
82	RYR3	1660156	6931	0.015	-0.1465	No
83	PCDHA6	780333 2370280	6948	0.015	-0.1472	No
84	WDFY3	3610041 4560333 4570273	7000	0.015	-0.1499	No
85	SOX5	2370576 2900167 3190128 5050528	7032	0.014	-0.1514	No
86	TNKS1BP1	7040184	7048	0.014	-0.1521	No
87	MAPRE3	7050504	7209	0.013	-0.1607	No
88	MASTL	380433 4480215 5390301	7240	0.013	-0.1622	No
89	PIK3R1	4730671	7321	0.013	-0.1664	No
90	DAZAP2	6200102	7352	0.012	-0.1679	No
91	PTPN4	1410047	7432	0.012	-0.1721	No
92	NRP2	4070400 5860041 6650446	7594	0.011	-0.1808	No
93	ARHGAP12	1050181	7751	0.010	-0.1892	No
94	SLC1A2	2230520	7755	0.010	-0.1892	No
95	DUSP8	6650039	7771	0.010	-0.1899	No
96	WNK3	4060053	7786	0.010	-0.1906	No
97	M6PR	2480458 3290593 3840324	7811	0.010	-0.1918	No
98	KLF11	6840739	8074	0.009	-0.2060	No
99	PAFAH1B1	4230333 6420121 6450066	8128	0.009	-0.2088	No
100	BIRC6	70148	8141	0.009	-0.2094	No
101	PKD2	4670390	8250	0.008	-0.2152	No
102	TEAD1	2470551	8361	0.008	-0.2211	No
103	PCDHA10	3830725	8522	0.007	-0.2298	No
104	SHANK2	1500452	8809	0.006	-0.2453	No
105	PCDH20	4200576	8897	0.006	-0.2500	No
106	BHLHB3	3450438	9088	0.005	-0.2603	No
107	PCDHA12	2810215	9117	0.005	-0.2618	No
108	SERTAD2	2810673 6840450	9291	0.005	-0.2712	No
109	PTPN2	130315	9321	0.005	-0.2728	No
110	EIF2C1	6900551	9369	0.004	-0.2753	No
111	TNFSF12	1940465	9557	0.004	-0.2854	No
112	LRCH2	2900162	9647	0.004	-0.2903	No
113	RTN2	4480538	9656	0.004	-0.2907	No
114	HIF1A	5670605	9787	0.003	-0.2977	No
115	RTN1	4150452 4850176	9912	0.003	-0.3045	No
116	HMGB3	2940168	9925	0.003	-0.3051	No
117	QKI	5220093 6130044	9948	0.003	-0.3063	No
118	FSTL5	770280	9951	0.003	-0.3064	No
119	BTG3	7050079	10040	0.003	-0.3111	No
120	PLCB1	2570050 7100102	10158	0.002	-0.3175	No
121	NHLH1	6100452	10243	0.002	-0.3221	No
122	KLF12	1660095 4810288 5340546 6520286	10298	0.002	-0.3250	No
123	PCDHA1	940026 540484	10314	0.002	-0.3258	No
124	MAB21L1	1450634 1580092	10316	0.002	-0.3258	No
125	SMAD7	430377	10452	0.001	-0.3332	No
126	BTBD7	730288	10570	0.001	-0.3396	No
127	HMGA2	2940121 3390647 5130279 6400136	10643	0.001	-0.3435	No
128	EMX2	1660092	10673	0.001	-0.3451	No
129	DCBLD2	5890333	10677	0.001	-0.3452	No
130	ANUBL1	1580113	10696	0.001	-0.3462	No
131	BNC2	4810603	10701	0.001	-0.3464	No
132	MYT1	6770524	10771	0.000	-0.3502	No
133	RFX3	520121 4280519 5570519 6100184	10856	0.000	-0.3548	No
134	NPAT	3800594 4670026	10901	0.000	-0.3572	No
135	STK38	7100114	10942	-0.000	-0.3593	No
136	TRIM3	5570156	10946	-0.000	-0.3595	No
137	FOXA1	3710609	11195	-0.001	-0.3730	No
138	CNOT7	2450338 5720397	11221	-0.001	-0.3744	No
139	PGM2L1	2350035	11376	-0.001	-0.3828	No
140	PCDHA3	3840402	11387	-0.001	-0.3833	No
141	STYX	1090358	11461	-0.002	-0.3873	No
142	NEUROG1	380341	11713	-0.002	-0.4010	No
143	NKIRAS1	2510440 5570671	11809	-0.003	-0.4061	No
144	GDA	3290435	11839	-0.003	-0.4077	No
145	FOXF2	1240091	11898	-0.003	-0.4108	No
146	THRA	6770341 110164 1990600	11917	-0.003	-0.4118	No
147	SLC24A4	2100487	11968	-0.003	-0.4145	No
148	ZFHX4	6110167	11973	-0.003	-0.4147	No
149	DNAJB6	2810309 5570451	11997	-0.003	-0.4159	No
150	ANKRD29	1450112	12045	-0.004	-0.4184	No
151	EREG	50519 4920129	12084	-0.004	-0.4204	No
152	KIAA1715	1190551	12107	-0.004	-0.4216	No
153	ACSL4	510020 1240041 3190050 4540500 5570463	12110	-0.004	-0.4217	No
154	HEY2	3990504	12158	-0.004	-0.4242	No
155	SP3	3840338	12266	-0.004	-0.4300	No
156	MAP3K12	2470373 6420162	12294	-0.005	-0.4314	No
157	ABHD3	2370091	12322	-0.005	-0.4328	No
158	RORB	6400035	12356	-0.005	-0.4346	No
159	MAP3K2	380270	12383	-0.005	-0.4360	No
160	YES1	6100050	12446	-0.005	-0.4393	No
161	DDX5	940021 2630338 3440148	12466	-0.005	-0.4403	No
162	CCNJ	870047	12505	-0.006	-0.4423	No
163	ARID4A	520156 1050707	12546	-0.006	-0.4444	No
164	ERBB4	4610400 4810017	12582	-0.006	-0.4463	No
165	SYT1	840364	12700	-0.006	-0.4526	No
166	MAP3K5	6020041 6380162	12783	-0.007	-0.4570	No
167	UBE3A	1240152 2690438 5860609	12858	-0.007	-0.4610	No
168	ZFYVE9	6980288 7100017	12909	-0.008	-0.4636	No
169	NF1	6980433	12948	-0.008	-0.4656	No
170	HIF1AN	2320309	12978	-0.008	-0.4671	No
171	SNX16	870446	12990	-0.008	-0.4676	No
172	SLITRK3	5910041	13015	-0.008	-0.4688	No
173	MAPK4	870142	13019	-0.008	-0.4689	No
174	HOXD8	3710156	13095	-0.009	-0.4729	No
175	FBXW11	6450632	13100	-0.009	-0.4730	No
176	FAM60A	3940092	13123	-0.009	-0.4741	No
177	USP15	610592 3520504	13188	-0.009	-0.4775	No
178	PCDHA7	1850019	13271	-0.010	-0.4819	No
179	COL19A1	6220441	13312	-0.010	-0.4840	No
180	PTPRT	6620433	13327	-0.011	-0.4846	No
181	RAPGEF4	6100563	13342	-0.011	-0.4853	No
182	MOBKL2B	940128	13706	-0.015	-0.5050	No
183	RBBP6	2320129	13716	-0.015	-0.5053	No
184	DDX3Y	1580278 4200519	13858	-0.016	-0.5128	No
185	VANGL1	380162	14018	-0.019	-0.5213	No
186	ROCK2	1780035 5720025	14035	-0.019	-0.5220	No
187	POLQ	1050053 2190102	14042	-0.020	-0.5221	No
188	LMX1A	2810239 5690324	14111	-0.021	-0.5256	No
189	SNX5	1570021 6860609	14121	-0.021	-0.5259	No
190	KLF9	3840022	14167	-0.022	-0.5281	No
191	GOPC	6620400	14209	-0.023	-0.5301	No
192	ERBB2IP	580253 1090672	14260	-0.024	-0.5326	No
193	WDR20	1240373	14319	-0.026	-0.5354	No
194	ASXL2	130670	14336	-0.026	-0.5360	No
195	MBNL1	2640762 7100048	14387	-0.028	-0.5385	No
196	PARD6B	4120600	14392	-0.028	-0.5384	No
197	TNFSF11	6350204	14396	-0.028	-0.5383	No
198	CUGBP2	6180121 6840139	14416	-0.028	-0.5390	No
199	EPHA4	460750	14509	-0.032	-0.5437	No
200	KIF5A	510435	14512	-0.032	-0.5435	No
201	PIGA	1940435 5290692	14563	-0.034	-0.5458	No
202	SUMF1	730050	14576	-0.035	-0.5461	No
203	NIPA1	380600	14662	-0.039	-0.5503	No
204	KIF23	5570112	14673	-0.039	-0.5505	No
205	SFMBT1	2360450 2370070	14689	-0.040	-0.5509	No
206	WEE1	3390070	14710	-0.041	-0.5515	No
207	CFL2	380239 6200368	14738	-0.043	-0.5525	No
208	ATRN	870735 3360390	14775	-0.045	-0.5540	No
209	R3HDM1	940685 3290161	14822	-0.048	-0.5560	No
210	CACNB1	2940427 3710487	14828	-0.048	-0.5558	No
211	NFAT5	2510411 5890195 6550152	14871	-0.050	-0.5576	No
212	MIB1	3800537	14980	-0.056	-0.5629	No
213	BLCAP	3990253	14992	-0.057	-0.5629	No
214	BCL2L2	2760692 6770739	15042	-0.060	-0.5649	No
215	ANKFY1	360309 5390021	15083	-0.063	-0.5664	No
216	RNF31	110035	15183	-0.070	-0.5711	No
217	TAF5L	5690152	15233	-0.074	-0.5730	No
218	ATP2C1	2630446 6520253	15361	-0.086	-0.5790	No
219	KCNN2	990025 3520524	15423	-0.093	-0.5813	No
220	SPRY4	1570594	15480	-0.099	-0.5833	No
221	SKI	6590008	15482	-0.099	-0.5823	No
222	RAB10	2360008 5890020	15563	-0.108	-0.5856	No
223	CHD9	430037 2570129 5420398	15642	-0.116	-0.5886	No
224	RKHD1	6860577	15692	-0.121	-0.5900	No
225	E2F7	4200056	15707	-0.123	-0.5895	No
226	RAB5B	130397 1980273 6900731	15709	-0.123	-0.5882	No
227	AKT3	1580270 3290278	15756	-0.129	-0.5893	No
228	CUL3	1850520	15767	-0.131	-0.5885	No
229	SOCS6	1170347 7100280	15805	-0.134	-0.5891	No
230	SNRK	630021 2030731 6350017	15834	-0.138	-0.5891	No
231	CNOT4	2320242 6760706	15894	-0.148	-0.5908	No
232	MAP3K8	2940286	15913	-0.149	-0.5902	No
233	PHTF2	6590053	15938	-0.154	-0.5899	No
234	SNIP1	5360092	16074	-0.174	-0.5954	No
235	EFNB1	2970433	16084	-0.175	-0.5940	No
236	BRWD1	3130048 3140168 6400601	16106	-0.179	-0.5933	No
237	ENPP5	1780338	16200	-0.196	-0.5963	No
238	LACE1	1410079	16221	-0.200	-0.5952	No
239	ZHX2	2900452	16244	-0.206	-0.5943	No
240	EFTUD1	5360736	16281	-0.212	-0.5940	No
241	BICD2	1090411	16418	-0.240	-0.5988	No
242	CRKRS	510537 2510551	16441	-0.247	-0.5974	No
243	PLEKHA3	5080068	16442	-0.247	-0.5948	No
244	PURB	5360138	16491	-0.262	-0.5946	No
245	PIK4CB	510450 1780452	16561	-0.280	-0.5954	No
246	SCAMP2	430114	16677	-0.314	-0.5984	No
247	SSH2	360056	16766	-0.338	-0.5996	Yes
248	CDK2	130484 2260301 4010088 5050110	16829	-0.357	-0.5992	Yes
249	GOLGA1	5860471	16838	-0.360	-0.5958	Yes
250	EPC2	2470095	16850	-0.365	-0.5925	Yes
251	SLC4A7	2370056	16858	-0.368	-0.5890	Yes
252	TBL1X	6400524	16897	-0.379	-0.5870	Yes
253	SFRS5	3450176 6350008	16938	-0.392	-0.5850	Yes
254	USP3	2060332	16955	-0.399	-0.5817	Yes
255	TOPORS	4060592	17000	-0.413	-0.5797	Yes
256	NFIX	2450152	17139	-0.468	-0.5822	Yes
257	NAGK	730041 3170086 5890053	17193	-0.489	-0.5799	Yes
258	HECA	3310612	17214	-0.498	-0.5757	Yes
259	ITCH	1410731 5700022	17243	-0.508	-0.5719	Yes
260	STX6	4850750 6770278	17269	-0.519	-0.5677	Yes
261	MECP2	1940450	17281	-0.523	-0.5628	Yes
262	MYB	1660494 5860451 6130706	17283	-0.524	-0.5573	Yes
263	RAD52	110093	17341	-0.553	-0.5545	Yes
264	STK17B	130091	17344	-0.555	-0.5487	Yes
265	VAMP4	4150102	17370	-0.566	-0.5441	Yes
266	GOSR1	730279	17401	-0.579	-0.5395	Yes
267	SLC40A1	2370286	17403	-0.579	-0.5334	Yes
268	ARHGAP24	540278 4540025	17464	-0.617	-0.5302	Yes
269	LAMP2	1230402 1980373	17537	-0.652	-0.5272	Yes
270	RAP2C	1690132	17697	-0.741	-0.5280	Yes
271	ATG16L1	5390292	17701	-0.743	-0.5203	Yes
272	ADIPOR2	1510035	17714	-0.749	-0.5130	Yes
273	OGT	2360131 4610333	17729	-0.756	-0.5057	Yes
274	CIC	6370161	17736	-0.765	-0.4979	Yes
275	TSG101	770148	17742	-0.769	-0.4900	Yes
276	ZDHHC9	3940204	17750	-0.775	-0.4821	Yes
277	BRMS1L	6110609	17778	-0.791	-0.4752	Yes
278	DNM2	50176 3170279	17811	-0.821	-0.4682	Yes
279	CASP2	2260692	17817	-0.825	-0.4597	Yes
280	MAP3K3	610685	17879	-0.873	-0.4538	Yes
281	ANKRD50	870543	17881	-0.875	-0.4446	Yes
282	PKNOX1	4210452	17889	-0.881	-0.4356	Yes
283	SEMA4B	110347	17904	-0.899	-0.4268	Yes
284	MAPK6	6760520	17913	-0.909	-0.4176	Yes
285	RB1	5900338	17966	-0.950	-0.4103	Yes
286	EIF4G2	3800575 6860184	17993	-0.974	-0.4014	Yes
287	STAT3	460040 3710341	18039	-1.029	-0.3929	Yes
288	DYRK1A	3190181	18053	-1.036	-0.3826	Yes
289	SMAD5	5700497	18089	-1.085	-0.3730	Yes
290	SOX4	2260091	18158	-1.199	-0.3639	Yes
291	MAPRE1	3290037	18200	-1.259	-0.3528	Yes
292	ARHGEF11	1780288	18235	-1.336	-0.3405	Yes
293	SORL1	630204	18263	-1.387	-0.3272	Yes
294	GTPBP2	2760750	18294	-1.461	-0.3133	Yes
295	KBTBD2	2320014	18334	-1.590	-0.2986	Yes
296	WDR1	1090129 3990121	18339	-1.617	-0.2816	Yes
297	NDEL1	2370465	18346	-1.631	-0.2646	Yes
298	HBP1	2510102 3130010 4210619	18407	-1.792	-0.2488	Yes
299	MAML1	2760008	18415	-1.816	-0.2299	Yes
300	TNRC6A	1240537 6130037 6200010	18420	-1.833	-0.2107	Yes
301	LRRIQ2	3990064 6370673 6380372	18484	-2.115	-0.1916	Yes
302	ITPR1	3450519	18496	-2.221	-0.1686	Yes
303	LRIG1	1050136	18542	-2.493	-0.1446	Yes
304	MMP14	670079	18560	-2.666	-0.1172	Yes
305	ELK3	460377 1400762 3710497	18570	-2.752	-0.0884	Yes
306	PPP1R10	110136 3170725 3610484	18605	-3.552	-0.0526	Yes
307	SMOC1	840039	18614	-4.998	0.0001	Yes