DatasetSet_03_truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls
#truncNotch_versus_normalThy.phenotype_truncNotch_versus_normalThy.cls
#truncNotch_versus_normalThy_repos
Phenotypephenotype_truncNotch_versus_normalThy.cls#truncNotch_versus_normalThy_repos
Upregulated in classnormalThy
GeneSetGCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D
Enrichment Score (ES)-0.61245984
Normalized Enrichment Score (NES)-1.736412
Nominal p-value0.0
FDR q-value0.0077982354
FWER p-Value0.022
Table: GSEA Results Summary



Fig 1: Enrichment plot: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SFRS250707 380593244.3820.0287No
2RGMA2450711742.9320.0460No
3DPYSL22100427 3130112 57003241802.1100.0547No
4CDKN1A4050088 64007062461.8630.0639No
5TGFBR21780711 1980537 65503982751.7590.0744No
6SLC6A924705202921.7140.0852No
7EGLN316604843921.4970.0900No
8TIMP247806094171.4640.0987No
9PPP3R11190041 15704878100.9800.0839No
10RPS6KA141206478300.9630.0895No
11CCND1460524 770309 3120576 698039810300.8300.0842No
12TNFAIP1694059310310.8300.0899No
13FASTK2690053 4280288 4610551 637029210480.8160.0946No
14LIMK1508006412200.7040.0901No
15E2F1536009313300.6380.0884No
16ARHGEF3344015613470.6300.0919No
17FJX1339003514050.6020.0929No
18APP251005314070.6020.0969No
19LAPTM4A45009215660.5370.0919No
20RBBP7430113 450450 237030916470.5070.0910No
21FGD1478002120220.3890.0731No
22SASH1407027022320.3350.0640No
23ARHGEF103120593 690067322950.3180.0627No
24ABHD24850504 684001023430.3060.0622No
25TRIP1046043823680.2990.0630No
26DDX11659067123990.2920.0633No
27SEMA4G589002624070.2900.0649No
28ZNF148642040324140.2890.0666No
29CRY2629072224280.2850.0678No
30IRF12340152 3450592 6290121 698057725470.2530.0631No
31P2RX42060497 665016226560.2270.0587No
32PPP2R2A2900014 570057526880.2200.0585No
33CELSR22320148 622015228190.1940.0527No
34HABP484048728420.1890.0528No
35UBE2J1407013329260.1760.0494No
36ZBTB7A378009229290.1750.0505No
37ZDHHC1387003529610.1710.0500No
38SS18L14610180 655006829880.1670.0497No
39TRPS187010030080.1650.0498No
40TRIM361400600 1980082 513003730320.1620.0496No
41PBX31300424 3710577 618057530410.1610.0503No
42TNFRSF21638010031330.1480.0463No
43HAS2536018131930.1400.0440No
44RPS6KA3198070733350.1230.0371No
45RHOC206024235080.1080.0284No
46DEDD640013136350.0980.0222No
47EPAS1529015636710.0950.0209No
48ARHGAP12810010 527006438660.0830.0108No
49SH3BP5710040838670.0830.0114No
50PFN2730040 570002638820.0820.0112No
51LDLR567038638950.0810.0111No
52DPYSL5490033338990.0810.0115No
53MMP24534015439000.0810.0120No
54PANX2756012139770.0780.0084No
55RRM26350059 694016240070.0760.0073No
56PCDHA11151025341560.069-0.0003No
57MARK473051941730.068-0.0008No
58ST8SIA2268008241760.068-0.0004No
59NPAS277067042680.064-0.0050No
60ATAD2870242 226068742690.064-0.0045No
61SMOC2117017042900.063-0.0052No
62PAPOLA4200286 485011243780.059-0.0096No
63YTHDF34540632 4670717 704060944290.057-0.0119No
64TBX3257067244400.057-0.0121No
65ZBTB4645044144490.057-0.0121No
66SP8406057644560.057-0.0121No
67PHF63120632 399004144730.056-0.0126No
68RNF1281230300 567027345030.055-0.0138No
69PTGFRN412052445990.052-0.0186No
70KPNA3704008846090.052-0.0188No
71CRIM113049146360.051-0.0199No
72PHF14010577 642005346470.051-0.0201No
73ST6GALNAC3407056346620.050-0.0205No
74PKIA407044148680.044-0.0314No
75PTHLH529073948940.044-0.0325No
76RAB22A110500 383070749000.044-0.0325No
77PCDHA5297034750500.040-0.0404No
78FLT13830167 492043851470.038-0.0454No
79PTPRO1940576 637033252210.037-0.0491No
80OSBPL53840537 604028652480.036-0.0503No
81AHCTF1704010052750.036-0.0515No
82BMPR25340066 696032852810.035-0.0515No
83ARID4B730754 666002653030.035-0.0525No
84FURIN412016853350.035-0.0539No
85ASF1A705002054030.033-0.0574No
86OLFM3580112 1050072 407020454210.033-0.0581No
87L3MBTL33800113 666006854660.032-0.0603No
88KCNJ10226057754870.031-0.0612No
89CXXC6281016855090.031-0.0621No
90CSNK1G1840082 1230575 394064755450.031-0.0638No
91RB1CC1510494 710007256910.028-0.0716No
92PDGFRA294033257340.028-0.0737No
93VLDLR870722 3060047 5340452 655013157400.027-0.0738No
94MARCH86039758710.025-0.0807No
95PPP3CA4760332 676009259620.024-0.0855No
96STC136016159920.024-0.0869No
97FBXL5510088 770075 297030959990.023-0.0871No
98NBL1248002160090.023-0.0874No
99NR4A26027360290.023-0.0883No
100TUSC2158025360910.022-0.0915No
101ETV170735 2940603 508046361770.022-0.0960No
102GRM7423011062200.021-0.0982No
103MAP3K9329070762520.021-0.0998No
104NEUROG2542027863290.020-0.1038No
105ATP1A211027865100.018-0.1135No
106DNAJB946011465380.018-0.1149No
107CREB5232036865670.018-0.1163No
108ANKRD96025367210.017-0.1246No
109COL4A3591007567740.016-0.1273No
110ZFPM246007268000.016-0.1286No
111RASD1245046368100.016-0.1290No
112CALD11770129 194039768860.016-0.1330No
113KCNQ2130204 290291 586013269230.015-0.1349No
114PCDHA6780333 237028069480.015-0.1361No
115WDFY33610041 4560333 457027370000.015-0.1388No
116TNKS1BP1704018470480.014-0.1413No
117MAPRE3705050472090.013-0.1500No
118VSX14610605 665011272210.013-0.1505No
119MASTL380433 4480215 539030172400.013-0.1514No
120PIK3R1473067173210.013-0.1557No
121DAZAP2620010273520.012-0.1572No
122RHOV586010073690.012-0.1580No
123PTPN4141004774320.012-0.1614No
124E2F350162 46018075600.011-0.1682No
125NRP24070400 5860041 665044675940.011-0.1700No
126TAOK2110575 638069276530.011-0.1731No
127EIF5A2704013977160.011-0.1764No
128ARHGAP12105018177510.010-0.1782No
129SLC1A2223052077550.010-0.1783No
130DUSP8665003977710.010-0.1791No
131WNK3406005377860.010-0.1798No
132M6PR2480458 3290593 384032478110.010-0.1810No
133KLF11684073980740.009-0.1953No
134PAFAH1B14230333 6420121 645006681280.009-0.1982No
135MYT1L5670369 666040382220.008-0.2032No
136PKD2467039082500.008-0.2047No
137CYP26B1263014283110.008-0.2079No
138PCDHA10383072585220.007-0.2194No
139LHX8570034785980.007-0.2234No
140SLC30A3185045186470.007-0.2260No
141GNB54480736 6550722 677046386850.007-0.2280No
142EPHA5234067187080.007-0.2292No
143PAFAH1B25360546 686067287290.007-0.2302No
144LHX62360731 336039788320.006-0.2358No
145PAK7383016489240.006-0.2407No
146BHLHB3345043890880.005-0.2497No
147PCDHA12281021591170.005-0.2512No
148ANK2651054691510.005-0.2529No
149WAC5340390 591016491820.005-0.2545No
150SERTAD22810673 684045092910.005-0.2604No
151LUZP1940075 4280458 618007093070.005-0.2612No
152EIF2C1690055193690.004-0.2646No
153TNFSF12194046595570.004-0.2748No
154TRPV6401071795770.004-0.2758No
155RTN2448053896560.004-0.2801No
156SMAD687050497330.003-0.2842No
157HIF1A567060597870.003-0.2871No
158SYAP1141050098070.003-0.2881No
159PURA387015698950.003-0.2929No
160HMGB3294016899250.003-0.2944No
161QKI5220093 613004499480.003-0.2956No
162ZNF25677025399910.003-0.2979No
163BTG37050079100400.003-0.3005No
164ABCA16290156100740.002-0.3023No
165ADAM93360411100760.002-0.3024No
166PTPN3870369101260.002-0.3050No
167NPAS3630408 4610066101460.002-0.3061No
168PLCB12570050 7100102101580.002-0.3067No
169NHLH16100452102430.002-0.3113No
170KLF121660095 4810288 5340546 6520286102980.002-0.3142No
171PCDHA1940026 540484103140.002-0.3150No
172SMAD7430377104520.001-0.3225No
173EPHA71190288 4010278105490.001-0.3278No
174BTBD7730288105700.001-0.3289No
175SLC17A77000037105970.001-0.3303No
176HMGA22940121 3390647 5130279 6400136106430.001-0.3328No
177DCBLD25890333106770.001-0.3346No
178ANUBL11580113106960.001-0.3356No
179BNC24810603107010.001-0.3358No
180ALX43870019108150.000-0.3420No
181NPAT3800594 4670026109010.000-0.3466No
182STK38710011410942-0.000-0.3488No
183TRIM3557015610946-0.000-0.3490No
184NTN4694039811075-0.000-0.3560No
185HLF237011311089-0.000-0.3567No
186KCNMA1145040211150-0.001-0.3600No
187RSBN1700048711194-0.001-0.3624No
188FOXA1371060911195-0.001-0.3624No
189CNOT72450338 572039711221-0.001-0.3637No
190APBB2513040311314-0.001-0.3688No
191PCDHA3384040211387-0.001-0.3727No
192NUP35534040811413-0.001-0.3741No
193STYX109035811461-0.002-0.3767No
194NEUROG138034111713-0.002-0.3904No
195EDG1420061911785-0.003-0.3943No
196NKIRAS12510440 557067111809-0.003-0.3955No
197SLC2A454044111888-0.003-0.3998No
198PCYT1B178040211910-0.003-0.4009No
199THRA6770341 110164 199060011917-0.003-0.4012No
200BAMBI665046311938-0.003-0.4023No
201SLC24A4210048711968-0.003-0.4039No
202DNAJB62810309 557045111997-0.003-0.4054No
203EREG50519 492012912084-0.004-0.4101No
204ACSL4510020 1240041 3190050 4540500 557046312110-0.004-0.4114No
205CCNT22100390 415056312113-0.004-0.4115No
206CLOCK1410070 2940292 339007512130-0.004-0.4124No
207MAP3K122470373 642016212294-0.005-0.4213No
208MAP3K238027012383-0.005-0.4261No
209DDHD13450241 3940523 638015612425-0.005-0.4283No
210ATP2B2378039712439-0.005-0.4290No
211YES1610005012446-0.005-0.4293No
212DDX5940021 2630338 344014812466-0.005-0.4303No
213CCNJ87004712505-0.006-0.4323No
214PPARA206002612517-0.006-0.4329No
215ARID4A520156 105070712546-0.006-0.4344No
216F3294018012655-0.006-0.4403No
217SET665028612669-0.006-0.4409No
218PLXNA17006612763-0.007-0.4460No
219MAP3K56020041 638016212783-0.007-0.4470No
220SSX2IP461017612904-0.008-0.4535No
221ZFYVE96980288 710001712909-0.008-0.4537No
222SNX1687044612990-0.008-0.4580No
223SLITRK3591004113015-0.008-0.4593No
224MAPK487014213019-0.008-0.4594No
225FBXW11645063213100-0.009-0.4637No
226FAM60A394009213123-0.009-0.4649No
227JUB5860711 590050013180-0.009-0.4679No
228SCML2329060313190-0.009-0.4683No
229PCDHA7185001913271-0.010-0.4726No
230RAPGEF4610056313342-0.011-0.4764No
231E2F5586057513405-0.011-0.4797No
232RAB11FIP1247033313442-0.012-0.4816No
233CD69380167 473008813448-0.012-0.4818No
234PRRX14120193 448039013546-0.013-0.4871No
235ANKRD13C527020213588-0.013-0.4892No
236MAT2B1690139 251070613677-0.014-0.4940No
237MYO1D676029213682-0.014-0.4941No
238RGL11500097 690045013709-0.015-0.4954No
239PLAG11450142 3870139 652003913805-0.016-0.5005No
240FOXL2567053713884-0.017-0.5047No
241FGD53520438 406050013957-0.018-0.5085No
242LASS65890576 652013813982-0.019-0.5097No
243VANGL138016214018-0.019-0.5115No
244PGBD5119004714029-0.019-0.5119No
245POLQ1050053 219010214042-0.020-0.5124No
246RABEP14760427 620046314076-0.020-0.5141No
247KLF9384002214167-0.022-0.5189No
248MGEA5610001414184-0.022-0.5196No
249FNDC3A2690097 329004414220-0.023-0.5214No
250NEK9344040214327-0.026-0.5270No
251PARD6B412060014392-0.028-0.5303No
252TNFSF11635020414396-0.028-0.5303No
253NR4A32900021 5860095 591003914428-0.029-0.5318No
254EPHA446075014509-0.032-0.5360No
255KIF5A51043514512-0.032-0.5359No
256SUMF173005014576-0.035-0.5391No
257SSFA2387013314599-0.035-0.5401No
258MINK1586064714661-0.039-0.5432No
259NIPA138060014662-0.039-0.5429No
260KIF23557011214673-0.039-0.5432No
261SFMBT12360450 237007014689-0.040-0.5437No
262WEE1339007014710-0.041-0.5445No
263NR2C2610009714727-0.042-0.5451No
264CFL2380239 620036814738-0.043-0.5454No
265NFAT52510411 5890195 655015214871-0.050-0.5523No
266DLGAP21090348 684015414912-0.053-0.5541No
267MORF4L1319010015036-0.060-0.5605No
268BCL2L22760692 677073915042-0.060-0.5603No
269ANKFY1360309 539002115083-0.063-0.5621No
270YPEL2556060915102-0.065-0.5626No
271GABPB26130450 705073515159-0.068-0.5652No
272SNF1LK611040315175-0.070-0.5656No
273MTMR31050014 492018015258-0.076-0.5696No
274RPS6KA52120563 704054615316-0.082-0.5721No
275OXR12370039 319070615376-0.088-0.5748No
276TAL1704023915388-0.090-0.5748No
277VPS26A1940494 572005915420-0.092-0.5758No
278SPRY4157059415480-0.099-0.5784No
279SKI659000815482-0.099-0.5778No
280DMTF15910047 1570497 2480100 662023915527-0.103-0.5795No
281RAB102360008 589002015563-0.108-0.5807No
282EZH1705041115564-0.108-0.5799No
283PCAF2230161 2570369 655045115571-0.108-0.5795No
284CHD9430037 2570129 542039815642-0.116-0.5826No
285RKHD1686057715692-0.121-0.5844No
286RAB5B130397 1980273 690073115709-0.123-0.5845No
287FRMD4A219017615754-0.129-0.5860No
288AKT31580270 329027815756-0.129-0.5852No
289SOCS61170347 710028015805-0.134-0.5869No
290SQSTM1655005615821-0.137-0.5868No
291CNOT42320242 676070615894-0.148-0.5897No
292MAP3K8294028615913-0.149-0.5897No
293PHTF2659005315938-0.154-0.5899No
294NANOS1130040216056-0.171-0.5952No
295TGOLN2492043316073-0.174-0.5949No
296EFNB1297043316084-0.175-0.5942No
297ATXN1555015616088-0.176-0.5932No
298ENPP5178033816200-0.196-0.5979No
299PKD1604067116207-0.198-0.5969No
300LACE1141007916221-0.200-0.5963No
301ZHX2290045216244-0.206-0.5961No
302CRK1230162 478012816249-0.206-0.5949No
303EFTUD1536073616281-0.212-0.5951No
304PERQ1134016416382-0.234-0.5990No
305XRN1590009316387-0.234-0.5976No
306BICD2109041116418-0.240-0.5976No
307PLEKHA3508006816442-0.247-0.5972No
308WDR42A620001916457-0.251-0.5963No
309PURB536013816491-0.262-0.5963No
310SSH236005616766-0.338-0.6090No
311ORMDL3134071116830-0.357-0.6100Yes
312SLC4A7237005616858-0.368-0.6090Yes
313MKNK21240020 527009216883-0.373-0.6077Yes
314TBL1X640052416897-0.379-0.6059Yes
315SENP1610053716914-0.383-0.6041Yes
316FBXO21655007016936-0.391-0.6026Yes
317USP3206033216955-0.399-0.6009Yes
318MKRN1141009716957-0.400-0.5982Yes
319TOPORS406059217000-0.413-0.5977Yes
320MAP3K11700003917016-0.419-0.5956Yes
321BCL2L11780044 420060117038-0.427-0.5938Yes
322WDR372630519 684034717051-0.431-0.5916Yes
323NAGK730041 3170086 589005317193-0.489-0.5959Yes
324HECA331061217214-0.498-0.5936Yes
325ITCH1410731 570002217243-0.508-0.5917Yes
326STX64850750 677027817269-0.519-0.5895Yes
327SAR1B251027317274-0.520-0.5862Yes
328MECP2194045017281-0.523-0.5829Yes
329HN1336015617285-0.524-0.5795Yes
330NCOA3454019517359-0.562-0.5797Yes
331GOSR173027917401-0.579-0.5780Yes
332SLC40A1237028617403-0.579-0.5741Yes
333KPNA2345011417408-0.582-0.5703Yes
334RBL1313037217417-0.585-0.5667Yes
335OSR1150002517435-0.596-0.5636Yes
336PTEN339006417467-0.618-0.5611Yes
337GAB1297015617477-0.622-0.5573Yes
338DYNC1LI25033817489-0.626-0.5536Yes
339FEM1C60300 6130717 698016417520-0.641-0.5509Yes
340CAMTA2399007517554-0.659-0.5482Yes
341ULK1610031517557-0.663-0.5438Yes
342DUSP2237018417590-0.679-0.5409Yes
343CCNG2319009517629-0.698-0.5382Yes
344RAP2C169013217697-0.741-0.5368Yes
345ATG16L1539029217701-0.743-0.5319Yes
346TMEM16F586000817716-0.750-0.5275Yes
347CIC637016117736-0.765-0.5233Yes
348TSG10177014817742-0.769-0.5183Yes
349ZDHHC9394020417750-0.775-0.5134Yes
350BRMS1L611060917778-0.791-0.5095Yes
351IHPK1134005317788-0.797-0.5045Yes
352DNM250176 317027917811-0.821-0.5001Yes
353RABGAP1505039717831-0.831-0.4955Yes
354FOXJ2245044117845-0.847-0.4904Yes
355MAP3K14589043517867-0.866-0.4856Yes
356MAP3K361068517879-0.873-0.4803Yes
357ANKRD5087054317881-0.875-0.4743Yes
358PKNOX1421045217889-0.881-0.4687Yes
359SEMA4B11034717904-0.899-0.4633Yes
360RB1590033817966-0.950-0.4601Yes
361RNF6264003517989-0.968-0.4547Yes
362EIF4G23800575 686018417993-0.974-0.4482Yes
363STAT3460040 371034118039-1.029-0.4437Yes
364DYRK1A319018118053-1.036-0.4373Yes
365SMAD5570049718089-1.085-0.4318Yes
366SRPK145011018140-1.177-0.4265Yes
367SOX4226009118158-1.199-0.4192Yes
368ZFYVE26686015218182-1.223-0.4121Yes
369MAPRE1329003718200-1.259-0.4044Yes
370EHD3536048418227-1.319-0.3968Yes
371ARHGEF11178028818235-1.336-0.3881Yes
372RUNX1384071118253-1.370-0.3796Yes
373SORL163020418263-1.387-0.3706Yes
374EGR2380040318270-1.404-0.3613Yes
375NEDD4L638036818298-1.475-0.3527Yes
376PLEKHM11050161 199075018321-1.547-0.3433Yes
377NDEL1237046518346-1.631-0.3335Yes
378PPP6C245067018348-1.635-0.3224Yes
379PLAGL2177014818365-1.695-0.3117Yes
380ARL4C119027918377-1.720-0.3005Yes
381RBL2580446 140067018403-1.780-0.2897Yes
382HBP12510102 3130010 421061918407-1.792-0.2776Yes
383MAPK92060273 3780209 407039718410-1.795-0.2654Yes
384TNRC6A1240537 6130037 620001018420-1.833-0.2534Yes
385ARHGEF18212027918441-1.887-0.2416Yes
386BNIP21410475 677008818465-2.018-0.2290Yes
387UBE3C314067318466-2.024-0.2152Yes
388LRRIQ23990064 6370673 638037218484-2.115-0.2016Yes
389RASSF22480079 572054618511-2.328-0.1871Yes
390BCL11B268067318514-2.342-0.1712Yes
391MCL1166067218541-2.493-0.1556Yes
392LRIG1105013618542-2.493-0.1385Yes
393CCND2534016718568-2.711-0.1213Yes
394TLE41450064 150051918569-2.751-0.1025Yes
395ELK3460377 1400762 371049718570-2.752-0.0837Yes
396MIDN2260132 522037718581-2.978-0.0639Yes
397HRBL1850102 3830253 478017618611-4.602-0.0340Yes
398SMOC184003918614-4.9980.0001Yes
Table: GSEA details [plain text format]



Fig 2: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D: Random ES distribution   
Gene set null distribution of ES for GCACTTT,MIR-17-5P,MIR-20A,MIR-106A,MIR-106B,MIR-20B,MIR-519D