Details for gene set JECHLINGER_EMT

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	JECHLINGER_EMT_DN
Enrichment Score (ES)	0.8033199
Normalized Enrichment Score (NES)	1.6264412
Nominal p-value	0.0057034222
FDR q-value	0.22118628
FWER p-Value	0.864

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SGK	1400131 2480056	32	2.307	0.1581	Yes
2	PADI2	2940092 6420136	37	2.221	0.3118	Yes
3	DUSP1	6860121	96	1.398	0.4055	Yes
4	TIAM1	5420288	104	1.369	0.5000	Yes
5	TGM2	5360452	207	0.897	0.5566	Yes
6	CTSH	60524	231	0.848	0.6142	Yes
7	ITPR1	3450519	269	0.768	0.6654	Yes
8	GRB7	2100471	340	0.657	0.7072	Yes
9	JUP	2510671	356	0.638	0.7505	Yes
10	VAMP8	380411 1190139	576	0.440	0.7692	Yes
11	FLNA	5390193	1092	0.262	0.7597	Yes
12	ACTN4	3840301 4590390 7050132	1168	0.246	0.7727	Yes
13	BCL6	940100	1204	0.240	0.7874	Yes
14	ITGB5	70129	1217	0.238	0.8033	Yes
15	CDH1	1940736	2341	0.098	0.7497	No
16	EGR2	3800403	3085	0.057	0.7136	No
17	NNT	540253 1170471 5550092 6760397	3465	0.043	0.6962	No
18	TIMP3	1450504 1980270	3764	0.036	0.6827	No
19	ATF3	1940546	3907	0.032	0.6772	No
20	HMMR	5720315 6380168	4075	0.029	0.6703	No
21	KLF2	6860270	4136	0.028	0.6690	No
22	CTGF	4540577	4767	0.020	0.6365	No
23	NUMB	2450735 3800253 6350040	5338	0.015	0.6069	No
24	SERPINB5	6940050	6386	0.009	0.5511	No
25	IRF6	840241 2640139 4050373 6840471	6736	0.008	0.5329	No
26	PKP1	1500433	8207	0.003	0.4540	No
27	F3	2940180	8719	0.002	0.4266	No
28	RARA	4050161	9286	0.000	0.3961	No
29	TACSTD1	3780025	9719	-0.001	0.3729	No
30	KITLG	2120047 6220300	10583	-0.003	0.3267	No
31	FOSB	1940142	10806	-0.004	0.3150	No
32	AMD1	6290128	11451	-0.006	0.2808	No
33	ARHGEF1	610347 4850603 6420672	13169	-0.014	0.1893	No
34	FBP2	1580193	13817	-0.020	0.1559	No
35	THBS1	4560494 430288	13904	-0.021	0.1528	No
36	TGFB3	1070041	15898	-0.074	0.0506	No
37	ATP1A1	5670451	16569	-0.117	0.0227	No
38	EGR1	4610347	17040	-0.161	0.0085	No
39	STAT5A	2680458	17747	-0.296	-0.0090	No
40	MYH9	3120091 4850292	18433	-0.804	0.0099	No