Details for gene set HSA04340_HEDGEHOG_SIGNALING

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	HSA04340_HEDGEHOG_SIGNALING_PATHWAY
Enrichment Score (ES)	0.75038004
Normalized Enrichment Score (NES)	1.586541
Nominal p-value	0.0018348624
FDR q-value	0.33313265
FWER p-Value	0.984

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CSNK1G2	3060095 4730037	30	2.476	0.4326	Yes
2	WNT8B	4560301	336	0.663	0.5325	Yes
3	CSNK1D	4280280 4480167 6450600	822	0.335	0.5650	Yes
4	PRKACB	4210170	882	0.318	0.6176	Yes
5	CSNK1E	2850347 5050093 6110301	887	0.316	0.6729	Yes
6	WNT6	4570364	1181	0.244	0.6999	Yes
7	GSK3B	5360348	1401	0.203	0.7237	Yes
8	WNT5B	5080162	1912	0.135	0.7199	Yes
9	PRKACA	2640731 4050048	1953	0.129	0.7404	Yes
10	BMP7	870039	2141	0.114	0.7504	Yes
11	SMO	5340538 6350132	3643	0.038	0.6762	No
12	RAB23	2970075	3674	0.038	0.6812	No
13	WNT2B	3130088 5960575	3960	0.031	0.6713	No
14	GLI2	3060632	4114	0.029	0.6681	No
15	BMP8A	1990537	4206	0.027	0.6680	No
16	WNT9A	3830711	4432	0.024	0.6601	No
17	CSNK1A1	2340427	4566	0.022	0.6568	No
18	WNT3A	6350348	4801	0.020	0.6476	No
19	LRP2	1400204 3290706	6016	0.011	0.5842	No
20	PTCH2	2900092	6274	0.010	0.5720	No
21	SHH	5570400	6670	0.008	0.5522	No
22	WNT10A	2100706	6754	0.008	0.5490	No
23	WNT4	4150619	7335	0.006	0.5188	No
24	HHIP	6940438	8160	0.003	0.4750	No
25	BMP5	4670048	9144	0.001	0.4221	No
26	WNT3	2360685	9219	0.000	0.4182	No
27	WNT7B	3520039	9400	-0.000	0.4085	No
28	BMP6	2100128	9709	-0.001	0.3921	No
29	WNT8A	4150014 5390731	9849	-0.001	0.3848	No
30	GLI1	4560176	10058	-0.002	0.3739	No
31	DHH	2120433	10135	-0.002	0.3702	No
32	WNT9B	50095	10145	-0.002	0.3700	No
33	FBXW11	6450632	10645	-0.003	0.3438	No
34	ZIC2	1410408	10810	-0.004	0.3356	No
35	IHH	1980735	10950	-0.004	0.3289	No
36	PRKX	2480390 2810026	11339	-0.006	0.3090	No
37	WNT7A	1170315	11450	-0.006	0.3041	No
38	WNT2	4610020	11667	-0.007	0.2937	No
39	BMP8B	3290102	11725	-0.007	0.2918	No
40	PTCH1	430278	11736	-0.007	0.2925	No
41	GAS1	2120504	11959	-0.008	0.2820	No
42	BMP2	6620687	12048	-0.008	0.2787	No
43	GLI3	5690148	12233	-0.009	0.2703	No
44	WNT16	3870563 4200687	12456	-0.010	0.2602	No
45	BMP4	380113	12935	-0.013	0.2367	No
46	WNT11	1230278	13243	-0.015	0.2227	No
47	CSNK1G1	840082 1230575 3940647	13361	-0.016	0.2192	No
48	WNT1	4780148	13567	-0.018	0.2113	No
49	BTRC	3170131	14812	-0.035	0.1505	No
50	WNT5A	840685 3120152	14967	-0.039	0.1491	No
51	SUFU	6650181	15972	-0.077	0.1086	No
52	WNT10B	510050	16005	-0.079	0.1208	No
53	CSNK1G3	110450	16490	-0.113	0.1145	No