Details for gene set EMT

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch.phenotype_absentNotch_versus_wtNotch.cls #absentNotch_versus_wtNotch_repos
Phenotype	phenotype_absentNotch_versus_wtNotch.cls#absentNotch_versus_wtNotch_repos
Upregulated in class	absentNotch
GeneSet	EMT_DN
Enrichment Score (ES)	0.79707485
Normalized Enrichment Score (NES)	1.6799699
Nominal p-value	0.0
FDR q-value	0.14257888
FWER p-Value	0.383

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SGK	1400131 2480056	32	2.307	0.1499	Yes
2	PADI2	2940092 6420136	37	2.221	0.2957	Yes
3	DUSP1	6860121	96	1.398	0.3844	Yes
4	TIAM1	5420288	104	1.369	0.4740	Yes
5	TGM2	5360452	207	0.897	0.5275	Yes
6	CTSH	60524	231	0.848	0.5820	Yes
7	PRKCZ	3780279	242	0.830	0.6360	Yes
8	ITPR1	3450519	269	0.768	0.6851	Yes
9	GRB7	2100471	340	0.657	0.7245	Yes
10	JUP	2510671	356	0.638	0.7656	Yes
11	VAMP8	380411 1190139	576	0.440	0.7828	Yes
12	FLNA	5390193	1092	0.262	0.7722	Yes
13	BCL6	940100	1204	0.240	0.7820	Yes
14	ITGB5	70129	1217	0.238	0.7971	Yes
15	CDH1	1940736	2341	0.098	0.7431	No
16	EGR2	3800403	3085	0.057	0.7068	No
17	SAT1	4570463	3176	0.053	0.7054	No
18	PLK2	6450152	3307	0.048	0.7016	No
19	NNT	540253 1170471 5550092 6760397	3465	0.043	0.6960	No
20	TIMP3	1450504 1980270	3764	0.036	0.6823	No
21	CA2	1660113 1660600	3767	0.036	0.6845	No
22	ATF3	1940546	3907	0.032	0.6791	No
23	HMMR	5720315 6380168	4075	0.029	0.6721	No
24	KLF2	6860270	4136	0.028	0.6707	No
25	CTGF	4540577	4767	0.020	0.6381	No
26	NUMB	2450735 3800253 6350040	5338	0.015	0.6084	No
27	SERPINB5	6940050	6386	0.009	0.5527	No
28	IRF6	840241 2640139 4050373 6840471	6736	0.008	0.5344	No
29	PKP1	1500433	8207	0.003	0.4554	No
30	F3	2940180	8719	0.002	0.4280	No
31	RARA	4050161	9286	0.000	0.3976	No
32	TSC22D1	1340739 6040181	9653	-0.001	0.3779	No
33	TACSTD1	3780025	9719	-0.001	0.3745	No
34	FOSB	1940142	10806	-0.004	0.3162	No
35	KLF10	4850056	11559	-0.006	0.2762	No
36	ARHGEF1	610347 4850603 6420672	13169	-0.014	0.1905	No
37	FBP2	1580193	13817	-0.020	0.1570	No
38	THBS1	4560494 430288	13904	-0.021	0.1538	No
39	CHKA	510324	15681	-0.064	0.0623	No
40	TGFB3	1070041	15898	-0.074	0.0555	No
41	ATP1A1	5670451	16569	-0.117	0.0272	No
42	EGR1	4610347	17040	-0.161	0.0125	No
43	STAT5A	2680458	17747	-0.296	-0.0061	No
44	MYH9	3120091 4850292	18433	-0.804	0.0099	No