Details for gene set GENERATION_OF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	truncNotch
GeneSet	GENERATION_OF_NEURONS
Enrichment Score (ES)	-0.67874235
Normalized Enrichment Score (NES)	-1.5784177
Nominal p-value	0.0018518518
FDR q-value	0.5436004
FWER p-Value	0.918

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CYFIP1	5690082	1370	0.370	-0.0453	No
2	APOE	4200671	1666	0.289	-0.0388	No
3	LDB1	5270601	1854	0.244	-0.0300	No
4	YWHAG	3780341	2010	0.207	-0.0223	No
5	CDK5R1	3870161	2270	0.161	-0.0238	No
6	NRTN	2450551	2308	0.155	-0.0138	No
7	MAPT	360706 1230706	2634	0.115	-0.0224	No
8	AMIGO1	6180215	2926	0.086	-0.0315	No
9	THY1	5910162	3234	0.064	-0.0430	No
10	RACGAP1	3990162 6620736	3421	0.053	-0.0490	No
11	KLK8	60035 2340440	3593	0.044	-0.0547	No
12	YWHAH	1660133 2810053	3745	0.038	-0.0600	No
13	NPTN	6200373	3798	0.036	-0.0600	No
14	RTN1	4150452 4850176	4478	0.018	-0.0953	No
15	SHH	5570400	5085	0.011	-0.1271	No
16	SMARCA1	4230315	5194	0.010	-0.1321	No
17	BAIAP2	460347 4730600	5253	0.010	-0.1345	No
18	OPHN1	2360100	5454	0.008	-0.1446	No
19	KCNIP2	60088 1780324	5497	0.008	-0.1463	No
20	UBB	4810138	5647	0.008	-0.1537	No
21	PARD3	3390324 5390541	5758	0.007	-0.1591	No
22	FARP2	4670037	6172	0.005	-0.1810	No
23	TGFB2	4920292	6205	0.005	-0.1823	No
24	ARTN	360670 1170333 1500520	6251	0.005	-0.1844	No
25	NLGN1	5670278	6991	0.003	-0.2240	No
26	ROBO1	3710398	7658	0.001	-0.2599	No
27	NRXN1	460408 5340270 6370066	7774	0.000	-0.2661	No
28	SLIT2	1940037	7987	-0.000	-0.2775	No
29	FEZ1	2630725 4810324	8059	-0.000	-0.2813	No
30	UNC5C	2640056	8598	-0.002	-0.3102	No
31	ATP2B2	3780397	8810	-0.002	-0.3214	No
32	PARD6B	4120600	8843	-0.002	-0.3229	No
33	NF1	6980433	9083	-0.003	-0.3356	No
34	BTG4	4060020	9485	-0.004	-0.3569	No
35	GHRL	2360619 6760438	9531	-0.004	-0.3590	No
36	NRXN3	1400546 3360471	9610	-0.004	-0.3629	No
37	LMX1B	1260561	9744	-0.005	-0.3697	No
38	ROBO2	450136	9829	-0.005	-0.3739	No
39	NTNG1	50270 1410427 4810333	9966	-0.005	-0.3808	No
40	S100B	6520088	10009	-0.006	-0.3826	No
41	POU6F2	5270451	10101	-0.006	-0.3871	No
42	RTN4RL2	6450609	10387	-0.007	-0.4019	No
43	CIT	2370601	10638	-0.008	-0.4148	No
44	CNTN4	1780300 5570577 6370019	10810	-0.008	-0.4234	No
45	PCSK9	3120044	10812	-0.008	-0.4228	No
46	POU4F1	2260315	11314	-0.010	-0.4490	No
47	NRP2	4070400 5860041 6650446	11583	-0.012	-0.4626	No
48	GDNF	4050487 5720739	12012	-0.014	-0.4846	No
49	BAI1	6350053	12041	-0.014	-0.4850	No
50	SEMA3B	5570563	12259	-0.016	-0.4955	No
51	GLI2	3060632	12387	-0.017	-0.5010	No
52	CDK5	940348	13260	-0.026	-0.5460	No
53	MDGA1	1170139	13286	-0.026	-0.5454	No
54	RND1	5080300	13357	-0.027	-0.5470	No
55	SLIT1	50110	13774	-0.035	-0.5668	No
56	ALS2	3130546 6400070	14467	-0.051	-0.6001	No
57	DPYSL5	4900333	14480	-0.052	-0.5967	No
58	OTX2	1190471	14907	-0.067	-0.6145	No
59	BRSK2	4050292	15142	-0.079	-0.6210	No
60	NTNG2	1770438 6380408	15445	-0.099	-0.6297	No
61	PAX2	6040270 7000133	15831	-0.135	-0.6400	No
62	SEMA4F	3850056	16551	-0.234	-0.6607	Yes
63	PPT1	6450440	16634	-0.245	-0.6461	Yes
64	LST1	5420372	16854	-0.282	-0.6361	Yes
65	SPON2	2680136	17077	-0.322	-0.6232	Yes
66	SERPINF1	7040367	17119	-0.329	-0.5999	Yes
67	FEZ2	5910181	17249	-0.358	-0.5791	Yes
68	RTN4RL1	2630368	17688	-0.486	-0.5652	Yes
69	MAP1S	1980463	17738	-0.504	-0.5288	Yes
70	RTN4	50725 630647 870097 870184	17755	-0.511	-0.4901	Yes
71	AGRN	6770152	17971	-0.624	-0.4535	Yes
72	TRAPPC4	520044	17982	-0.630	-0.4053	Yes
73	PICK1	3990500 4920500	18465	-1.411	-0.3221	Yes
74	DTX1	5900372	18604	-4.268	0.0006	Yes