Details for gene set V$USF

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch.phenotype_absentNotch_versus_truncNotch.cls #absentNotch_versus_truncNotch_repos
Phenotype	phenotype_absentNotch_versus_truncNotch.cls#absentNotch_versus_truncNotch_repos
Upregulated in class	absentNotch
GeneSet	V$USF_01
Enrichment Score (ES)	0.6479639
Normalized Enrichment Score (NES)	1.701004
Nominal p-value	0.0
FDR q-value	0.01031549
FWER p-Value	0.064

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BOK	1170373 5860446	37	2.083	0.0423	Yes
2	ILF3	940722 3190647 6520110	40	2.079	0.0863	Yes
3	UBE4B	780008 3610154	46	1.996	0.1285	Yes
4	U2AF2	450600 4670128 5420292	48	1.982	0.1705	Yes
5	ATF4	730441 1740195	80	1.582	0.2025	Yes
6	ATF7IP	2690176 6770021	87	1.539	0.2348	Yes
7	CD164	3830594	112	1.406	0.2634	Yes
8	CSRP2BP	4570717 5550333	196	1.140	0.2831	Yes
9	AKAP12	1450739	202	1.125	0.3068	Yes
10	BRD2	1450300 5340484 6100605	234	1.053	0.3275	Yes
11	TIMM8A	110279	374	0.875	0.3385	Yes
12	PTMA	5570148	422	0.827	0.3536	Yes
13	CCAR1	3190092	486	0.771	0.3665	Yes
14	DDX3X	2190020	518	0.751	0.3808	Yes
15	MORF4L2	6450133	519	0.750	0.3968	Yes
16	HMOX1	1740687	561	0.714	0.4097	Yes
17	GNA13	4590102	623	0.677	0.4208	Yes
18	KBTBD2	2320014	657	0.655	0.4329	Yes
19	HTF9C	3190048 4120132	677	0.645	0.4456	Yes
20	TOPORS	4060592	687	0.640	0.4587	Yes
21	DCTN4	3390010 5550170	690	0.639	0.4722	Yes
22	COMMD3	2510259	730	0.619	0.4832	Yes
23	IGF2R	1570402	769	0.602	0.4939	Yes
24	ALDH6A1	1770746	774	0.598	0.5064	Yes
25	AATF	5220575	797	0.586	0.5177	Yes
26	STMN1	1990717	879	0.551	0.5250	Yes
27	RPA1	360452	914	0.539	0.5346	Yes
28	UTX	2900017 6770452	1006	0.499	0.5403	Yes
29	TFRC	4050551	1030	0.491	0.5495	Yes
30	HPS3	6650348	1035	0.489	0.5597	Yes
31	EIF4G1	4070446	1073	0.470	0.5677	Yes
32	NIT1	1230338 3940671	1141	0.447	0.5735	Yes
33	GSK3B	5360348	1172	0.435	0.5811	Yes
34	PPM1A	1170301 5900273	1222	0.418	0.5874	Yes
35	ATP6V1A	6590242	1228	0.416	0.5959	Yes
36	STX6	4850750 6770278	1278	0.398	0.6017	Yes
37	LAMP1	2470524	1287	0.395	0.6097	Yes
38	PRPS1	6350129	1306	0.387	0.6169	Yes
39	SLC38A2	1470242 3800026	1329	0.378	0.6238	Yes
40	EIF4B	5390563 5270577	1372	0.369	0.6293	Yes
41	NUDC	4780025	1400	0.359	0.6355	Yes
42	MAX	5220021	1592	0.309	0.6317	Yes
43	ATIC	4010593 6380463	1673	0.287	0.6334	Yes
44	ZCCHC7	6510592	1711	0.276	0.6373	Yes
45	HOXB4	540131	1749	0.269	0.6410	Yes
46	SIRT1	1190731	1801	0.257	0.6437	Yes
47	PFDN2	4230156	1822	0.252	0.6480	Yes
48	HSPBAP1	4060022	2273	0.160	0.6270	No
49	GPX1	4150093	2593	0.119	0.6122	No
50	ZFYVE26	6860152	2609	0.118	0.6139	No
51	PER1	3290315	2704	0.106	0.6111	No
52	COMMD8	5890358	2705	0.106	0.6133	No
53	TNRC15	6760746	2767	0.100	0.6121	No
54	SMYD4	2640403	2769	0.099	0.6142	No
55	SLC31A2	1450577	2800	0.097	0.6146	No
56	OSGEP	5700239	2822	0.096	0.6155	No
57	UBXD3	5050193	2830	0.095	0.6172	No
58	RBBP6	2320129	2864	0.092	0.6173	No
59	RAI14	770288 1660075	2873	0.091	0.6188	No
60	MTCH2	3780603 6620215	3176	0.068	0.6039	No
61	DUSP1	6860121	3287	0.061	0.5992	No
62	RPL13A	2680519 5700142	3317	0.059	0.5989	No
63	PICALM	1940280	3558	0.046	0.5869	No
64	APEX1	3190519	3577	0.045	0.5869	No
65	TOM1	940398 2190053	3688	0.040	0.5818	No
66	EIF4E	1580403 70133 6380215	3698	0.039	0.5821	No
67	SSR1	5890100	3750	0.037	0.5802	No
68	BRDT	3940102	3796	0.036	0.5785	No
69	DIRC2	2810494	3949	0.031	0.5709	No
70	FEN1	1770541	3976	0.029	0.5701	No
71	SNX5	1570021 6860609	4131	0.025	0.5623	No
72	SUMF1	730050	4134	0.025	0.5627	No
73	HNRPD	4120021	4535	0.017	0.5414	No
74	HOXA7	5910152	4545	0.017	0.5412	No
75	SC5DL	6650390	4630	0.016	0.5370	No
76	JMJD2C	3290341	4700	0.015	0.5336	No
77	FOXD3	6550156	4790	0.014	0.5290	No
78	AKAP1	110148 1740735 2260019 7000563	5566	0.008	0.4872	No
79	RARG	6760136	5628	0.008	0.4840	No
80	NPTX1	3710736	5754	0.007	0.4774	No
81	HNRPH2	2630040 5720671	5910	0.006	0.4691	No
82	GLA	4610364	6084	0.006	0.4599	No
83	POGK	5290315	6167	0.005	0.4555	No
84	NPM1	4730427	6194	0.005	0.4542	No
85	ARPC5	1740411 3450300	6263	0.005	0.4507	No
86	SET	6650286	6370	0.004	0.4450	No
87	ETV1	70735 2940603 5080463	6490	0.004	0.4386	No
88	TRIM37	5270091	6528	0.004	0.4367	No
89	AP1S2	780279 4280707	6750	0.003	0.4248	No
90	PPP1R3C	2640170	6805	0.003	0.4219	No
91	CUL5	450142	6869	0.003	0.4186	No
92	HOXA1	1190524 5420142	6973	0.003	0.4131	No
93	ARMET	5130670	6977	0.003	0.4129	No
94	UBE2B	4780497	7059	0.002	0.4086	No
95	HOXA9	610494 4730040 5130601	7074	0.002	0.4079	No
96	USP15	610592 3520504	7238	0.002	0.3991	No
97	ADAM10	3780156	7349	0.002	0.3932	No
98	XPO1	540707	7497	0.001	0.3852	No
99	NDUFS1	2650253	7503	0.001	0.3850	No
100	KIAA1715	1190551	7506	0.001	0.3849	No
101	UTY	5890441	7587	0.001	0.3806	No
102	HOXA11	6980133	8360	-0.001	0.3387	No
103	HOXD10	6100039	8453	-0.001	0.3338	No
104	PCDHA10	3830725	9177	-0.003	0.2946	No
105	DVL2	6110162	9436	-0.004	0.2807	No
106	CGN	5890139 6370167 6400537	9608	-0.004	0.2715	No
107	SLC36A1	5080242	9707	-0.005	0.2663	No
108	DUSP7	2940309	9711	-0.005	0.2662	No
109	SLC1A7	1990181	9755	-0.005	0.2640	No
110	BDNF	2940128 3520368	9954	-0.005	0.2534	No
111	FMR1	5050075	10007	-0.006	0.2507	No
112	CPT1A	6350093	10012	-0.006	0.2506	No
113	BHLHB3	3450438	10093	-0.006	0.2464	No
114	BMP4	380113	10330	-0.007	0.2337	No
115	SLC26A2	2360278	10348	-0.007	0.2329	No
116	VPS16	430064 3390041 6860301	10632	-0.008	0.2178	No
117	HOXC5	1580017	10743	-0.008	0.2120	No
118	SEPT3	3830022 5290079	10992	-0.009	0.1987	No
119	SYT3	6380017	10998	-0.009	0.1986	No
120	GATA5	430465	11111	-0.009	0.1927	No
121	FSHR	610041 7040121	11143	-0.009	0.1913	No
122	ODC1	5670168	11181	-0.010	0.1895	No
123	IRS4	430341 1190450	11184	-0.010	0.1896	No
124	RGL1	1500097 6900450	11637	-0.012	0.1653	No
125	TOM1L2	4810465	11760	-0.012	0.1589	No
126	RAD9A	110300 1940632 3990390 6040014	11773	-0.013	0.1586	No
127	ELAVL3	2850014	11867	-0.013	0.1538	No
128	HOXB5	2900538	12392	-0.017	0.1257	No
129	GTF2A1	4120138 4920524 5390110 1230397	12476	-0.018	0.1216	No
130	RNF146	1660735	12569	-0.018	0.1170	No
131	MCM2	5050139	12705	-0.020	0.1101	No
132	PHC3	4920332	12784	-0.021	0.1063	No
133	GGN	1410528 4210082 5290170	12839	-0.021	0.1038	No
134	RAB3IL1	380685 5420176	12933	-0.022	0.0993	No
135	DNMT3A	4050068 4810717	13067	-0.024	0.0926	No
136	ESR2	6220138	13307	-0.027	0.0802	No
137	MCOLN1	4480563	13655	-0.033	0.0620	No
138	NRIP3	1340372	13832	-0.036	0.0533	No
139	OPRD1	4280138	13956	-0.038	0.0474	No
140	GTF2H1	2570746 2650148	14039	-0.040	0.0438	No
141	NEUROD1	3060619	14295	-0.047	0.0310	No
142	POLR3C	6940546	14341	-0.048	0.0296	No
143	TESK2	6520524	14454	-0.051	0.0246	No
144	GABARAP	1450286	14496	-0.052	0.0234	No
145	HMGN2	3140091	14721	-0.060	0.0126	No
146	SGOL1	1980075 5220092 6020711	14754	-0.061	0.0121	No
147	HOXB7	4540706 4610358	14814	-0.063	0.0103	No
148	NFX1	450504	14830	-0.064	0.0108	No
149	COPZ1	6940100	14860	-0.065	0.0106	No
150	SLC12A6	610278 1980035 5340671	14912	-0.067	0.0093	No
151	TSC1	1850672	14930	-0.068	0.0098	No
152	EIF3S10	1190079 3840176	14940	-0.069	0.0108	No
153	AKAP10	2630504 5910577	15312	-0.089	-0.0074	No
154	ZNF318	5890091 6130021	15381	-0.094	-0.0091	No
155	VPS33A	780113	15479	-0.101	-0.0122	No
156	CLN3	780368	15549	-0.108	-0.0137	No
157	RBBP4	6650528	15602	-0.113	-0.0141	No
158	RAB24	520601 4540739	15719	-0.125	-0.0178	No
159	GNB2	2350053	15798	-0.132	-0.0192	No
160	EPC1	1570050 5290095 6900193	15826	-0.135	-0.0178	No
161	TAF6L	1850056	16104	-0.171	-0.0291	No
162	ALG1	2570112	16132	-0.175	-0.0269	No
163	OPRS1	6130128 6290717	16163	-0.180	-0.0247	No
164	DHX35	1230440	16352	-0.207	-0.0305	No
165	MYST3	5270500	16625	-0.244	-0.0400	No
166	RANBP1	430215 1090180	16800	-0.274	-0.0437	No
167	HTATIP	5360739	16811	-0.276	-0.0384	No
168	SCYL1	5050717	16841	-0.279	-0.0340	No
169	MRPL27	2060131	17154	-0.337	-0.0437	No
170	BAX	3830008	17271	-0.365	-0.0423	No
171	CHD4	5420059 6130338 6380717	17466	-0.415	-0.0440	No
172	ISGF3G	3190131 7100142	17467	-0.415	-0.0352	No
173	EEF1B2	4850400 6130161	18143	-0.779	-0.0552	No
174	PLCG2	5720008	18233	-0.883	-0.0413	No
175	GNAS	630441 1850373 4050152	18457	-1.366	-0.0243	No
176	TEF	1050050 3120397 4060487	18489	-1.549	0.0069	No