Details for gene set REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	absentNotch
GeneSet	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
Enrichment Score (ES)	0.71462864
Normalized Enrichment Score (NES)	1.587166
Nominal p-value	0.0016501651
FDR q-value	0.04723032
FWER p-Value	0.459

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SFRS2	50707 380593	63	3.079	0.0788	Yes
2	RBMX	7100162 2900541	151	2.204	0.1329	Yes
3	FUS	4760619	242	1.702	0.1735	Yes
4	RBM5	3520402 5270121	272	1.602	0.2147	Yes
5	SNRPD3	2970050	274	1.600	0.2574	Yes
6	TXNL4A	4120286 6510242	285	1.576	0.2989	Yes
7	METTL3	360497	299	1.541	0.3393	Yes
8	U2AF2	450600 4670128 5420292	459	1.236	0.3638	Yes
9	U2AF1	5130292	483	1.190	0.3943	Yes
10	SFRS6	60224	529	1.115	0.4216	Yes
11	POLR2E	2900348 3360348	562	1.082	0.4488	Yes
12	EFTUD2	2470707 4610148	630	1.007	0.4720	Yes
13	CCAR1	3190092	682	0.940	0.4944	Yes
14	NUP93	2190273	782	0.852	0.5118	Yes
15	THOC4	3800731 6400114	799	0.840	0.5333	Yes
16	YBX1	1340039 4730500	866	0.802	0.5512	Yes
17	NUP43	3360482	887	0.785	0.5711	Yes
18	CSTF2	6040463	1065	0.674	0.5795	Yes
19	SF3A3	6660603	1233	0.589	0.5862	Yes
20	CPSF1	6290064	1249	0.579	0.6008	Yes
21	GTF2F2	2690546	1251	0.578	0.6162	Yes
22	NCBP2	5340500	1252	0.577	0.6316	Yes
23	PHF5A	2690519	1346	0.535	0.6409	Yes
24	POLR2I	4060400	1367	0.524	0.6538	Yes
25	NUP155	5720576 6220114	1383	0.521	0.6669	Yes
26	SNRPF	3170280	1434	0.501	0.6776	Yes
27	NUP107	6380021	1490	0.480	0.6874	Yes
28	RAE1	7050121	1747	0.395	0.6841	Yes
29	SFRS9	3800047	1809	0.371	0.6908	Yes
30	SNRPD2	6110035	1814	0.369	0.7004	Yes
31	NUP160	1990551	1868	0.355	0.7070	Yes
32	POLR2H	5890242	1899	0.346	0.7146	Yes
33	SF3A2	3140500	2322	0.239	0.6982	No
34	NUP62	1240128	2362	0.230	0.7023	No
35	SFRS3	770315 4230593	2480	0.208	0.7015	No
36	NUPL2	6550537	2519	0.199	0.7048	No
37	CSTF1	4610129	2604	0.184	0.7052	No
38	GTF2F1	360093	2650	0.177	0.7075	No
39	DNAJC8	4050075	2851	0.147	0.7006	No
40	SNRPG	2340551	3164	0.111	0.6867	No
41	SF3B4	110072	3180	0.110	0.6888	No
42	MAGOH	2370373 5050068	3453	0.085	0.6764	No
43	NUDT21	1240167	3489	0.083	0.6768	No
44	SNRPA	2570100 4150121 6940484	4017	0.053	0.6497	No
45	SNRPB	1230097 2940086 3520671	4027	0.053	0.6507	No
46	POLR2J	7100372	4252	0.044	0.6397	No
47	POLR2A	5220647	4402	0.039	0.6328	No
48	PTBP1	4070736	4692	0.032	0.6180	No
49	RANBP2	4280338	5005	0.026	0.6019	No
50	POLR2G	5890600	5045	0.025	0.6004	No
51	SFRS1	2360440	5619	0.018	0.5700	No
52	PCF11	1240180	6633	0.011	0.5156	No
53	SNRPE	5080021	7260	0.008	0.4820	No
54	RNPS1	610736 1090021	7554	0.007	0.4664	No
55	POLR2B	3780138	8833	0.003	0.3975	No
56	SLBP	6220601	9408	0.001	0.3666	No
57	TPR	1990066 6550390	10129	-0.001	0.3277	No
58	NUP54	940546 2360156 4060278	11083	-0.004	0.2764	No
59	NUP188	1190470	11087	-0.004	0.2764	No
60	NUP153	7000452	11299	-0.005	0.2651	No
61	DHX9	60017 1170095 2260014	11353	-0.005	0.2624	No
62	SNRPB2	5720577	12382	-0.009	0.2071	No
63	POLR2C	1690020	12853	-0.011	0.1821	No
64	PAPOLA	4200286 4850112	12858	-0.011	0.1822	No
65	NUP35	5340408	13229	-0.014	0.1626	No
66	SF3B1	7000632	13396	-0.015	0.1540	No
67	SNRPA1	1050735 6110131	14440	-0.031	0.0986	No
68	NFX1	450504	14588	-0.035	0.0916	No
69	PCBP2	5690048	14601	-0.035	0.0918	No
70	NUP37	2370097 6370435 6380008	14791	-0.042	0.0828	No
71	SMC1A	3060600 5700148 5890113 6370154	15141	-0.061	0.0655	No
72	EIF4E	1580403 70133 6380215	15251	-0.069	0.0615	No
73	CSTF3	3850156 5570458	15926	-0.133	0.0287	No
74	PABPN1	460519	16311	-0.187	0.0130	No
75	SF3B3	3710044	16341	-0.193	0.0166	No
76	PRPF8	1230497 1570600	16395	-0.203	0.0191	No
77	PCBP1	1050088	16401	-0.205	0.0243	No
78	SFRS5	3450176 6350008	16408	-0.206	0.0295	No
79	SF3B2	6590576	16469	-0.218	0.0321	No
80	SRRM1	6110025	16953	-0.334	0.0149	No
81	SF3A1	1580315	17009	-0.350	0.0213	No
82	SF4	3830341	17172	-0.404	0.0234	No
83	CD2BP2	1580301	17570	-0.573	0.0173	No
84	PRPF4	430301 2970364	17698	-0.656	0.0279	No
85	SFRS7	2760408	17927	-0.808	0.0372	No