Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | IDX_TSA_DN_CLUSTER2 |
| Enrichment Score (ES) | -0.62647355 |
| Normalized Enrichment Score (NES) | -1.8172503 |
| Nominal p-value | 0.003012048 |
| FDR q-value | 0.14980952 |
| FWER p-Value | 0.8 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LAMP2 | 1416343_a_at 1416344_at 1428094_at 1434503_s_at | 677 | 0.772 | 0.0001 | No | ||
| 2 | PGCP | 1416441_at 1432387_at 1448338_at | 821 | 0.645 | 0.0195 | No | ||
| 3 | VCL | 1416156_at 1416157_at 1445256_at | 1169 | 0.463 | 0.0222 | No | ||
| 4 | GBA | 1437044_a_at 1450099_a_at | 1301 | 0.411 | 0.0328 | No | ||
| 5 | ZFP36L2 | 1437626_at 1439054_at 1451034_at | 1343 | 0.396 | 0.0468 | No | ||
| 6 | WBP5 | 1451230_a_at | 1487 | 0.355 | 0.0545 | No | ||
| 7 | SLC1A4 | 1423549_at 1423550_at 1456003_a_at | 1844 | 0.285 | 0.0497 | No | ||
| 8 | PTGIS | 1445044_at 1448816_at | 2326 | 0.221 | 0.0366 | No | ||
| 9 | RAB31 | 1416165_at 1431691_a_at | 2429 | 0.208 | 0.0403 | No | ||
| 10 | SERPINF1 | 1416168_at 1453724_a_at | 2646 | 0.187 | 0.0380 | No | ||
| 11 | PDLIM7 | 1417959_at 1428319_at 1443785_x_at | 3085 | 0.156 | 0.0242 | No | ||
| 12 | CD99 | 1428850_x_at 1430514_a_at 1453556_x_at | 3300 | 0.145 | 0.0202 | No | ||
| 13 | PLA2G7 | 1430700_a_at | 4388 | 0.103 | -0.0253 | No | ||
| 14 | OGN | 1419662_at 1419663_at | 4833 | 0.091 | -0.0420 | No | ||
| 15 | BAX | 1416837_at | 4885 | 0.090 | -0.0407 | No | ||
| 16 | ASAH1 | 1416735_at | 6189 | 0.062 | -0.0977 | No | ||
| 17 | ITGAV | 1421198_at 1432296_a_at 1432678_at 1432679_at 1452784_at | 6565 | 0.056 | -0.1126 | No | ||
| 18 | TWIST2 | 1448925_at | 7025 | 0.048 | -0.1317 | No | ||
| 19 | DSTN | 1417124_at | 7489 | 0.040 | -0.1512 | No | ||
| 20 | PLTP | 1417963_at 1456424_s_at | 7563 | 0.039 | -0.1530 | No | ||
| 21 | EPPB9 | 1417596_at | 8757 | 0.022 | -0.2067 | No | ||
| 22 | FGF7 | 1422243_at 1438405_at | 9155 | 0.017 | -0.2241 | No | ||
| 23 | MAP1LC3B | 1415928_a_at 1415929_at 1415930_a_at 1428024_at | 9951 | 0.006 | -0.2602 | No | ||
| 24 | SLC7A5 | 1418326_at | 10110 | 0.004 | -0.2673 | No | ||
| 25 | PRSS23 | 1430956_at 1431057_a_at 1437671_x_at 1446560_at | 10589 | -0.002 | -0.2891 | No | ||
| 26 | PHLDB2 | 1454862_at | 12834 | -0.032 | -0.3904 | No | ||
| 27 | CD276 | 1417599_at | 13981 | -0.049 | -0.4408 | No | ||
| 28 | SKI | 1426373_at 1429192_at 1444785_at 1456547_at | 14315 | -0.054 | -0.4539 | No | ||
| 29 | VCAM1 | 1415989_at 1436003_at 1448162_at 1451314_a_at | 15580 | -0.075 | -0.5087 | No | ||
| 30 | COL4A5 | 1425475_at 1425476_at | 15756 | -0.078 | -0.5135 | No | ||
| 31 | PRAF2 | 1416781_at 1416782_s_at | 15855 | -0.080 | -0.5148 | No | ||
| 32 | LOX | 1416121_at 1437903_at 1448228_at | 16907 | -0.102 | -0.5587 | No | ||
| 33 | TSPAN6 | 1416872_at 1448501_at | 17313 | -0.113 | -0.5727 | No | ||
| 34 | SCPEP1 | 1426555_at 1455908_a_at | 17596 | -0.121 | -0.5807 | No | ||
| 35 | NCAM1 | 1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at | 17639 | -0.122 | -0.5777 | No | ||
| 36 | PLXNB2 | 1416683_at | 17741 | -0.125 | -0.5773 | No | ||
| 37 | PRDX4 | 1416166_a_at 1416167_at 1431269_at | 17773 | -0.126 | -0.5737 | No | ||
| 38 | EMP3 | 1417104_at | 17994 | -0.133 | -0.5784 | No | ||
| 39 | RPS6KA4 | 1438243_at 1448498_at | 18177 | -0.138 | -0.5812 | No | ||
| 40 | ANXA3 | 1460330_at | 18239 | -0.140 | -0.5783 | No | ||
| 41 | NQO2 | 1436189_at 1449983_a_at 1455590_at | 19047 | -0.172 | -0.6083 | No | ||
| 42 | SERTAD1 | 1417406_at | 19102 | -0.174 | -0.6038 | No | ||
| 43 | F2R | 1437308_s_at 1450852_s_at | 19340 | -0.187 | -0.6071 | No | ||
| 44 | LEPROT | 1424438_a_at 1436900_x_at 1451350_a_at | 19422 | -0.191 | -0.6031 | No | ||
| 45 | SLC38A4 | 1428111_at 1448889_at | 19909 | -0.229 | -0.6161 | No | ||
| 46 | CAP1 | 1417461_at 1417462_at | 20136 | -0.252 | -0.6164 | Yes | ||
| 47 | USP22 | 1437151_at 1456043_at | 20154 | -0.254 | -0.6069 | Yes | ||
| 48 | PLD3 | 1416013_at | 20208 | -0.260 | -0.5989 | Yes | ||
| 49 | CAPG | 1447803_x_at 1450355_a_at | 20328 | -0.273 | -0.5934 | Yes | ||
| 50 | FXYD5 | 1418296_at | 20425 | -0.287 | -0.5862 | Yes | ||
| 51 | PDPN | 1419309_at 1444100_at | 20436 | -0.288 | -0.5751 | Yes | ||
| 52 | ACTA2 | 1416454_s_at 1444105_at 1456658_at | 20735 | -0.334 | -0.5753 | Yes | ||
| 53 | CMTM3 | 1448316_at | 20866 | -0.365 | -0.5666 | Yes | ||
| 54 | PPGB | 1445659_at 1448128_at 1458466_at | 20885 | -0.370 | -0.5525 | Yes | ||
| 55 | ANXA5 | 1425567_a_at | 20950 | -0.387 | -0.5399 | Yes | ||
| 56 | BDNF | 1422168_a_at 1422169_a_at | 21318 | -0.564 | -0.5340 | Yes | ||
| 57 | MYH9 | 1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at | 21376 | -0.614 | -0.5119 | Yes | ||
| 58 | MSN | 1421814_at 1450379_at | 21392 | -0.627 | -0.4874 | Yes | ||
| 59 | TES | 1424246_a_at 1440649_at 1460378_a_at | 21431 | -0.662 | -0.4625 | Yes | ||
| 60 | GNB1 | 1417432_a_at 1425908_at 1454696_at 1459442_at | 21915 | -2.671 | -0.3772 | Yes | ||
| 61 | TMSB10 | 1417219_s_at 1436682_at 1436902_x_at 1437185_s_at 1455946_x_at | 21934 | -9.405 | 0.0000 | Yes |
