DatasetSet_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls
#BT_ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in classBT_ATM_minus
GeneSetHYPOXIA_RCC_UP
Enrichment Score (ES)0.61316955
Normalized Enrichment Score (NES)1.648222
Nominal p-value0.0045801527
FDR q-value0.4047337
FWER p-Value0.997
Table: GSEA Results Summary



Fig 1: Enrichment plot: HYPOXIA_RCC_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RPS15A1453467_s_at 1457726_at74.8260.1333Yes
2RPL221448398_s_at 1453118_s_at382.9810.2145Yes
3EWSR11417238_at 1425919_at 1436884_x_at 1441074_at 1456461_at482.7760.2910Yes
4GLTSCR11440238_at 1446548_at 1446616_at 1447189_at1022.2400.3506Yes
5YIPF51418576_at 1444289_at 1449142_a_at1222.0960.4078Yes
6CEACAM11425538_x_at 1425675_s_at 1427630_x_at 1427711_a_at 1427712_at 1450494_x_at 1452532_x_at 1460681_at1891.7850.4542Yes
7ATP6V1A1422508_at 1445916_at 1450634_at3571.3020.4827Yes
8SERBP11418563_at 1418564_s_at 1418565_at 1437280_s_at 1440195_at 1441501_at3651.2870.5180Yes
9ALDH18A11415836_at 1435855_x_at 1437325_x_at 1437333_x_at 1437620_x_at3951.2260.5506Yes
10SYNCRIP1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at4061.2060.5835Yes
11GMFB1417069_a_at 1431686_a_at 1431687_at 1448570_at 1448571_a_at6180.8400.5972Yes
12ECT21419513_a_at7120.7320.6132Yes
13WBP51451230_a_at14870.3550.5876No
14YEATS21447943_x_at 1459108_a_at15360.3460.5950No
15PECR1439167_at 1448910_at22990.2230.5663No
16TMEM51424042_at25340.1980.5611No
17PDLIM71417959_at 1428319_at 1443785_x_at30850.1560.5402No
18MRPL411428588_a_at 1428589_at 1428590_at35830.1320.5211No
19IDI11423804_a_at 1451122_at35910.1320.5244No
20LRRC481424340_at 1440117_at 1457241_at51340.0840.4562No
21UACA1452985_at54540.0770.4437No
22POLD11448187_at 1456055_x_at55190.0760.4429No
23STIM21434219_at 1444185_at55880.0740.4418No
24APLP11416134_at 1435857_s_at57930.0700.4344No
25POU5F11417945_at58930.0680.4318No
26LSM31448536_at61450.0630.4220No
27CKAP41426754_x_at 1426755_at 1452181_at 1455019_x_at62400.0620.4195No
28APEX11416135_at 1437715_x_at 1456079_x_at62890.0600.4189No
29GTF2A21433528_at64050.0580.4153No
30RAB141415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at64150.0580.4165No
31DPM21415675_at69690.0490.3925No
32TROVE21423433_at 1436533_at 1436534_at 1436535_at78750.0350.3521No
33TMEM1411435258_at 1435259_s_at82410.0290.3362No
34RPL391423032_at 1450840_a_at84280.0270.3284No
35TRSPAP11428746_a_at 1428747_at87560.0220.3140No
36PAN31428768_at 1440149_at 1447895_x_at 1458465_at88730.0210.3093No
37DNAJB121421032_a_at 1435886_at90330.0180.3025No
38RNF191417508_at 1417509_at100530.0050.2560No
39HAX11426187_a_at101680.0030.2509No
40ATP5G31454661_at103150.0010.2442No
41NDUFB71416417_a_at 1448331_at10464-0.0010.2375No
42SHB1434153_at10994-0.0080.2135No
43MRPL531451178_at11796-0.0180.1773No
44CARD101449491_at11933-0.0200.1716No
45PPM1F1430631_at 1454934_at12186-0.0230.1607No
46FHL11417872_at 1459003_at12320-0.0250.1553No
47GNG121421947_at 1455089_at12790-0.0310.1347No
48PARL1433478_at 1447116_at 1447242_at13360-0.0390.1098No
49SCARB21454704_at 1460235_at13906-0.0480.0862No
50CD2761417599_at13981-0.0490.0841No
51KIF1B1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at14329-0.0540.0697No
52ARF51422807_at14355-0.0550.0701No
53TNFRSF10B1421296_at 1422344_s_at14609-0.0590.0601No
54RPL371453729_a_at14632-0.0590.0608No
55VMD21428841_at14878-0.0630.0513No
56PPP2R5D1450560_a_at14894-0.0630.0524No
57NOSIP1418965_at 1431428_a_at15209-0.0680.0399No
58ZBTB221448705_at15362-0.0710.0349No
59SCYE11416486_at15413-0.0720.0346No
60GADD45GIP11417619_at 1446783_at 1448776_at15636-0.0760.0265No
61PRPF191419839_x_at 1449635_at 1456531_x_at 1460633_at15973-0.0820.0134No
62RHOT21426822_at16363-0.090-0.0019No
63PERP1416271_at 1427378_at16419-0.091-0.0019No
64VIL21450850_at 1456725_x_at16537-0.094-0.0046No
65SSU721425674_a_at 1431090_at 1441282_at 1446225_at17326-0.113-0.0375No
66COQ51417264_at 1417265_s_at17481-0.118-0.0413No
67SETD71423003_at 1435437_at17536-0.119-0.0405No
68PWP11417873_at 1454142_a_at18424-0.146-0.0770No
69METTL31423099_a_at18631-0.154-0.0822No
70WDR61415770_at 1455940_x_at18970-0.168-0.0930No
71ANLN1433543_at 1439648_at19014-0.170-0.0903No
72MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at19132-0.176-0.0908No
73SLC3A21425364_a_at19196-0.179-0.0887No
74KBTBD21451214_at19370-0.188-0.0914No
75PNKD1418746_at 1451399_at19491-0.196-0.0915No
76KIFC31416199_at19668-0.209-0.0937No
77HIRIP31434936_at19927-0.230-0.0992No
78CTSC1416382_at 1437939_s_at 1446834_at20312-0.271-0.1092No
79APLP21421887_a_at 1421888_x_at 1421889_a_at 1423739_x_at 1432344_a_at 1446786_at20914-0.379-0.1262No
80CAND11428648_at 1428649_at 1435781_at 1455751_at21062-0.428-0.1211No
81GADD45B1420197_at 1449773_s_at 1450971_at21244-0.512-0.1152No
82MRPL131424204_at 1435966_x_at 1459856_at 1460354_a_at21260-0.522-0.1015No
83TES1424246_a_at 1440649_at 1460378_a_at21431-0.662-0.0909No
84MRPS311417737_at 1443165_at21492-0.727-0.0735No
85NOLC11428869_at 1428870_at 1450087_a_at21686-1.076-0.0525No
86RHOF1434794_at 1441510_at 1455902_x_at21901-2.3050.0015No
Table: GSEA details [plain text format]



Fig 2: HYPOXIA_RCC_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HYPOXIA_RCC_UP: Random ES distribution   
Gene set null distribution of ES for HYPOXIA_RCC_UP