Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | HSA00534_HEPARAN_SULFATE_BIOSYNTHESIS |
| Enrichment Score (ES) | -0.8042163 |
| Normalized Enrichment Score (NES) | -1.8417091 |
| Nominal p-value | 0.0022727272 |
| FDR q-value | 0.20265314 |
| FWER p-Value | 0.7 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | EXTL2 | 1422538_at 1422539_at | 1738 | 0.307 | -0.0421 | No | ||
| 2 | EXT2 | 1447319_at 1447743_x_at 1460170_at | 3477 | 0.136 | -0.1048 | No | ||
| 3 | HS3ST2 | 1438624_x_at 1440814_x_at 1454784_at | 6417 | 0.058 | -0.2319 | No | ||
| 4 | NDST3 | 1443277_at 1453777_a_at | 6821 | 0.051 | -0.2440 | No | ||
| 5 | HS6ST2 | 1420938_at 1420939_at 1446257_at 1450047_at | 10235 | 0.002 | -0.3995 | No | ||
| 6 | EXT1 | 1417730_at 1439877_at 1440011_at 1440092_at 1456655_at 1458054_at 1458296_at | 10901 | -0.007 | -0.4290 | No | ||
| 7 | NDST4 | 1421318_at 1431452_at 1450195_at | 13060 | -0.035 | -0.5232 | No | ||
| 8 | HS3ST1 | 1423450_a_at | 13629 | -0.043 | -0.5439 | No | ||
| 9 | EXTL1 | 1423305_at | 14670 | -0.060 | -0.5841 | No | ||
| 10 | HS3ST3A1 | 1435622_at | 16209 | -0.087 | -0.6438 | No | ||
| 11 | HS6ST1 | 1417293_at | 18081 | -0.135 | -0.7127 | No | ||
| 12 | HS3ST3B1 | 1421331_at 1421332_at 1433977_at 1442816_at 1444055_at | 18730 | -0.158 | -0.7230 | Yes | ||
| 13 | GLCE | 1425876_a_at 1428374_at 1440386_at | 18830 | -0.162 | -0.7079 | Yes | ||
| 14 | HS6ST3 | 1421599_at | 19126 | -0.175 | -0.7001 | Yes | ||
| 15 | NDST2 | 1417931_at | 19161 | -0.177 | -0.6802 | Yes | ||
| 16 | NDST1 | 1422044_at 1428367_at 1442995_at 1445505_at 1460436_at | 21881 | -1.883 | -0.5757 | Yes | ||
| 17 | HS2ST1 | 1422739_at 1440905_at 1450729_at 1450730_at | 21886 | -1.952 | -0.3390 | Yes | ||
| 18 | EXTL3 | 1421339_at 1434703_at | 21917 | -2.811 | 0.0008 | Yes |
