Details for gene set REACTOME_SEMAPHORIN

Table: GSEA Results Summary

Dataset	Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos
Upregulated in class	BT_ATM_minus
GeneSet	REACTOME_SEMAPHORIN_INTERACTIONS
Enrichment Score (ES)	0.6899298
Normalized Enrichment Score (NES)	1.5742514
Nominal p-value	0.006849315
FDR q-value	0.6740418
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTPRC	1422124_a_at 1440165_at	67	2.575	0.2213	Yes
2	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	146	1.935	0.3864	Yes
3	ITGB1	1426918_at 1426919_at 1426920_x_at 1427771_x_at 1438119_at 1452545_a_at	251	1.572	0.5187	Yes
4	FYN	1417558_at 1441647_at 1448765_at	398	1.220	0.6183	Yes
5	SEMA3E	1419717_at 1425906_a_at 1427673_a_at	565	0.909	0.6899	Yes
6	SEMA7A	1422040_at 1459903_at	1583	0.335	0.6727	No
7	CDK5R1	1421123_at 1421124_at 1433450_at 1433451_at	1817	0.291	0.6874	No
8	ROCK1	1423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at	3461	0.137	0.6244	No
9	ARHGEF11	1443539_at 1446904_at 1457188_at	5543	0.075	0.5360	No
10	ERBB2	1424919_at	5708	0.072	0.5347	No
11	LIMK1	1417627_a_at 1425836_a_at 1456234_at 1458989_at	6074	0.065	0.5237	No
12	ITGA1	1439713_at 1446569_at 1455251_at	6318	0.060	0.5178	No
13	TYROBP	1450792_at	6695	0.054	0.5053	No
14	MET	1422990_at	7837	0.035	0.4563	No
15	FARP2	1424583_at 1435985_at 1439681_at 1440799_s_at	8792	0.022	0.4146	No
16	FES	1427368_x_at 1452410_a_at	8937	0.020	0.4098	No
17	SEMA3A	1420416_at 1420417_at 1449865_at	9035	0.018	0.4070	No
18	SEMA6D	1446536_at 1448060_at 1453055_at 1459318_at	9911	0.007	0.3676	No
19	PIP5K1C	1450228_a_at	10540	-0.002	0.3391	No
20	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	11478	-0.014	0.2975	No
21	CDK5	1422590_at 1450674_at	13046	-0.035	0.2290	No
22	RHOA	1437628_s_at	15444	-0.073	0.1259	No
23	MYL6	1435041_at	17083	-0.107	0.0605	No
24	CFL1	1448346_at 1455138_x_at	17478	-0.118	0.0527	No
25	RRAS	1418448_at	17876	-0.129	0.0459	No
26	PAK1	1420979_at 1420980_at 1450070_s_at 1459029_at	18252	-0.140	0.0409	No
27	RHOG	1422572_at	18414	-0.146	0.0463	No
28	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	18470	-0.148	0.0567	No
29	CD72	1426112_a_at	20226	-0.261	-0.0007	No
30	HSP90AB1	1416364_at 1416365_at	20434	-0.287	0.0149	No
31	MYH9	1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at	21376	-0.614	0.0255	No